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BioLiP
>protein
ADDIVFKAKNGDVKFPHKAHQKAVPDCKKCHEKGPGKIEGFGKEMAHGKGCKGCHEEMKKGPTKCGECHKK

The query sequence (length=71) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 4haj:A 71 71 0.9718 0.9718 0.9718 1.41e-43 4hb6:A, 4hb8:A, 4hbf:A, 4hc3:A, 4hdl:A, 2ldo:A, 2lzz:A, 2mz9:A, 2n91:A, 1os6:A, 3sel:X, 3sj0:X, 3sj1:X, 3sj4:X
2 3bxu:A 71 71 0.7887 0.7887 0.7887 1.13e-34 3bxu:B
3 3h33:A 72 69 0.6338 0.6250 0.6522 3.73e-28
4 3h34:A 70 69 0.5775 0.5857 0.5942 5.97e-22
5 3h4n:B 69 68 0.5775 0.5942 0.6029 1.99e-19 3h4n:A
6 1ehj:A 68 71 0.4648 0.4853 0.4648 1.67e-11 1f22:A, 1hh5:A, 1kwj:A, 1l3o:A, 1lm2:A, 1new:A
7 2bq4:B 115 93 0.4507 0.2783 0.3441 1.43e-04 2bq4:A
8 3cao:A 103 30 0.2254 0.1553 0.5333 4.51e-04 3car:A
9 1aqe:A 110 93 0.3662 0.2364 0.2796 0.010 1czj:A
10 2e84:A 513 80 0.3380 0.0468 0.3000 0.027
11 2e84:A 513 74 0.2817 0.0390 0.2703 7.7
12 4lmh:D 695 65 0.2958 0.0302 0.3231 0.031 4lmh:A, 4lmh:B, 4lmh:C
13 1i77:A 107 55 0.2817 0.1869 0.3636 0.11
14 1zzh:B 308 34 0.1408 0.0325 0.2941 0.67 1zzh:A, 1zzh:C, 1zzh:D
15 1gws:A 503 74 0.3099 0.0437 0.2973 0.69 2cvc:A, 1h29:A, 1h29:B, 1h29:C, 1h29:D
16 1gws:A 503 52 0.2676 0.0378 0.3654 1.4 2cvc:A, 1h29:A, 1h29:B, 1h29:C, 1h29:D
17 1gws:A 503 69 0.3099 0.0437 0.3188 3.6 2cvc:A, 1h29:A, 1h29:B, 1h29:C, 1h29:D
18 4fvk:A 367 17 0.1408 0.0272 0.5882 0.84 4fvk:B, 4gdi:A, 4gdi:B, 4gdi:C, 4gdi:D, 4gdi:E, 4gdi:F, 4gdj:A, 4gez:A, 4gez:B, 4gez:C, 4gez:D, 4gez:E, 4gez:F, 4gez:G, 4gez:H, 4gez:I, 4gez:J, 4gez:K, 4gez:L
19 1z1n:X 516 56 0.2817 0.0388 0.3571 1.1
20 1z1n:X 516 91 0.3521 0.0484 0.2747 6.3
21 4gdj:B 321 17 0.1408 0.0312 0.5882 1.1 4gdj:C, 4gdj:D
22 19hc:A 292 83 0.3521 0.0856 0.3012 1.6 19hc:B, 1ofw:A, 1ofw:B, 1ofy:A, 1ofy:B
23 5mog:B 472 29 0.1690 0.0254 0.4138 1.7 5mog:A, 5mog:C, 5mog:D, 5mog:E
24 1duw:A 289 51 0.2535 0.0623 0.3529 2.1
25 1duw:A 289 81 0.2958 0.0727 0.2593 4.7
26 3ov0:A 318 78 0.3380 0.0755 0.3077 2.1 3oue:A, 3ouq:A, 1rwj:A
27 3ov0:A 318 76 0.2958 0.0660 0.2763 5.1 3oue:A, 3ouq:A, 1rwj:A
28 2c1v:A 335 34 0.1268 0.0269 0.2647 3.0 2c1u:A, 2c1u:B, 2c1u:C, 2c1u:D, 2c1v:B
29 2cy3:A 118 31 0.1972 0.1186 0.4516 3.3 1w7o:A
30 8gy2:B 433 35 0.1690 0.0277 0.3429 3.5
31 6cwy:D 487 14 0.1268 0.0185 0.6429 5.2
32 3kyd:B 477 14 0.1268 0.0189 0.6429 5.5
33 4qo5:A 521 26 0.1268 0.0173 0.3462 6.0
34 8hmf:A 533 25 0.0986 0.0131 0.2800 6.2 8hme:A
35 3kyc:B 548 14 0.1268 0.0164 0.6429 6.7 6cwz:D, 6xog:B, 6xoh:B, 1y8q:B, 1y8q:D, 1y8r:B, 1y8r:E
36 8xmd:B 1061 32 0.1408 0.0094 0.3125 7.2 7eu0:B, 8hyj:B, 8xme:B
37 8xmc:B 1082 32 0.1408 0.0092 0.3125 8.2 7eu1:B, 8xmb:B
38 2ccy:A 127 15 0.1408 0.0787 0.6667 8.9 2ccy:B
39 3umv:A 472 33 0.1268 0.0191 0.2727 9.5 3umv:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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