BioLiP

>protein
AATLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQI
QGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKG
RGLASGYDSAIALPQAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYA
SIEPA

The query sequence (length=245) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	5v2c:O	245	245	1.0000	1.0000	1.0000	0.0	5b5e:O, 5b5e:o, 5b66:O, 5b66:o, 7cji:O, 7cji:o, 7cjj:O, 7cjj:o, 7cou:O, 7cou:o, 5e79:O, 5e79:o, 5e7c:O, 5e7c:o, 4fby:O, 4fby:f, 8gn0:O, 8gn0:o, 8gn1:O, 8gn1:o, 8gn2:O, 8gn2:o, 5gth:O, 5gth:o, 5gti:O, 5gti:o, 5h2f:O, 5h2f:o, 8ir5:O, 8ir5:o, 8ir6:O, 8ir6:o, 8ir7:O, 8ir7:o, 8ir8:O, 8ir8:o, 8ir9:O, 8ir9:o, 8ira:O, 8ira:o, 8irb:O, 8irb:o, 8irc:O, 8irc:o, 8ird:O, 8ird:o, 8ire:O, 8ire:o, 8irf:O, 8irf:o, 8irg:O, 8irg:o, 8irh:O, 8irh:o, 8iri:O, 8iri:o, 4ixq:O, 4ixq:o, 4ixr:O, 4ixr:o, 6jlj:O, 6jlj:o, 6jlk:O, 6jlk:o, 6jll:O, 6jll:o, 6jlm:O, 6jlm:o, 6jln:O, 6jln:o, 6jlo:O, 6jlo:o, 6jlp:O, 6jlp:o, 3kzi:O, 4pbu:O, 4pbu:o, 4rvy:O, 4rvy:o, 4tnh:O, 4tnh:o, 4tni:O, 4tni:o, 4tnj:O, 4tnj:o, 4tnk:O, 4tnk:o, 4ub6:O, 4ub6:o, 4ub8:O, 4ub8:o, 5v2c:o, 4v62:AO, 4v62:BO, 4v82:BO, 5ws5:O, 5ws5:o, 5ws6:O, 5ws6:o, 3wu2:O, 3wu2:o, 7yq2:O, 7yq2:o, 7yq7:O, 7yq7:o, 5zzn:O, 5zzn:o
2	5g38:A	172	228	0.6776	0.9651	0.7281	1.13e-105	5g39:A, 5g3a:A
3	4yuu:o2	245	248	0.5102	0.5102	0.5040	4.57e-80	4yuu:O1
4	7oui:o	197	239	0.3918	0.4873	0.4017	2.02e-47	7oui:O
5	5nm7:G	260	37	0.0531	0.0500	0.3514	0.60	5nm7:A
6	8sf7:FM	417	90	0.0898	0.0528	0.2444	1.3
7	8t66:B	156	51	0.0612	0.0962	0.2941	1.4	8t65:A, 8t65:B, 8t66:A
8	2r9q:B	342	26	0.0571	0.0409	0.5385	1.8	2r9q:C
9	8dg5:A	1635	86	0.0898	0.0135	0.2558	1.9	8dg7:A
10	8dfv:A	1664	86	0.0898	0.0132	0.2558	2.0
11	2j1n:A	346	87	0.1020	0.0723	0.2874	2.2	8i8r:A, 8i8r:C, 8i8r:B, 8i8x:A, 8i8x:C, 8i8x:B, 2j1n:B, 2j1n:C
12	8dga:A	1629	51	0.0694	0.0104	0.3333	2.7
13	5nyn:A	119	43	0.0612	0.1261	0.3488	3.0
14	7zn6:A	576	28	0.0531	0.0226	0.4643	6.3
15	5szj:A	175	126	0.1306	0.1829	0.2540	6.5	5lpn:A, 5lpn:C
16	4aj9:C	682	39	0.0612	0.0220	0.3846	7.8	4aj9:A, 4aj9:B, 4aj9:D, 4bim:A, 4bim:B, 4bim:C, 4bim:D, 3ej6:A, 3ej6:B, 3ej6:C, 3ej6:D, 6nsw:A, 6nsw:B, 6nsw:C, 6nsw:D, 6nsy:A, 6nsy:B, 6nsy:C, 6nsy:D, 6nsz:A, 6nsz:B, 6nsz:C, 6nsz:D, 6nt0:A, 6nt0:B, 6nt0:C, 6nt0:D, 6nt1:A, 6nt1:B, 6nt1:C, 6nt1:D, 3zj4:A, 3zj4:B, 3zj4:C, 3zj4:D, 3zj5:A, 3zj5:B, 3zj5:C, 3zj5:D

[Back]