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BioLiP
Download all results in tab-seperated text for 24 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8yr2:A (2.89) BS01 41U ? GO:0003779 ... P23975 38750358
    2 8yr2:A (2.89) BS02 PIO ? GO:0003779 ... P23975 38750358
    3 8yr2:A (2.89) BS03 CLR ? GO:0003779 ... P23975 38750358
    4 8yr2:A (2.89) BS04 CLR ? GO:0003779 ... P23975 38750358
    5 8yr2:A (2.89) BS05 CLR ? GO:0003779 ... P23975 38750358
    6 8yr2:A (2.89) BS06 CLR ? GO:0003779 ... P23975 38750358
    7 8yr2:A (2.89) BS07 A1LX7 ? GO:0003779 ... P23975 38750358
    8 8yr2:A (2.89) BS08 A1LX7 ? GO:0003779 ... P23975 38750358
    9 8yr2:A (2.89) BS09 CLR ? GO:0003779 ... P23975 38750358
    10 8yr2:A (2.89) BS10 CLR ? GO:0003779 ... P23975 38750358
    11 8yr2:A (2.89) BS11 CLR ? GO:0003779 ... P23975 38750358
    12 8yr2:A (2.89) BS12 CLR ? GO:0003779 ... P23975 38750358
    13 8yr2:B (2.89) BS01 41U ? GO:0003779 ... P23975 38750358
    14 8yr2:B (2.89) BS02 PIO ? GO:0003779 ... P23975 38750358
    15 8yr2:B (2.89) BS03 CLR ? GO:0003779 ... P23975 38750358
    16 8yr2:B (2.89) BS04 CLR ? GO:0003779 ... P23975 38750358
    17 8yr2:B (2.89) BS05 CLR ? GO:0003779 ... P23975 38750358
    18 8yr2:B (2.89) BS06 CLR ? GO:0003779 ... P23975 38750358
    19 8yr2:B (2.89) BS07 A1LX7 ? GO:0003779 ... P23975 38750358
    20 8yr2:B (2.89) BS08 A1LX7 ? GO:0003779 ... P23975 38750358
    21 8yr2:B (2.89) BS09 CLR ? GO:0003779 ... P23975 38750358
    22 8yr2:B (2.89) BS10 CLR ? GO:0003779 ... P23975 38750358
    23 8yr2:B (2.89) BS11 CLR ? GO:0003779 ... P23975 38750358
    24 8yr2:B (2.89) BS12 CLR ? GO:0003779 ... P23975 38750358
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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