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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8xgy:A (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    2 8xgy:A (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    3 8xgy:A (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    4 8xgy:B (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    5 8xgy:B (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    6 8xgy:C (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    7 8xgy:C (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    8 8xgy:C (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    9 8xgy:D (2.81) BS01 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    10 8xgy:D (2.81) BS02 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    11 8xgy:D (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    12 8xgy:E (2.81) BS01 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    13 8xgy:E (2.81) BS02 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    14 8xgy:E (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    15 8xgy:F (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    16 8xgy:F (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    17 8xgy:F (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    18 8xgy:G (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    19 8xgy:G (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    20 8xgy:H (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    21 8xgy:H (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    22 8xgy:H (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    23 8xgy:I (2.81) BS01 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    24 8xgy:I (2.81) BS02 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    25 8xgy:I (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    26 8xgy:J (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    27 8xgy:J (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    28 8xgy:K (2.81) BS01 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    29 8xgy:K (2.81) BS02 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    30 8xgy:K (2.81) BS03 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    31 8xgy:L (2.81) BS01 ZN 2.3.2.5 GO:0005515 ... Q16769 38817193
    32 8xgy:L (2.81) BS02 A1D5C 2.3.2.5 GO:0005515 ... Q16769 38817193
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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