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BioLiP
Download all results in tab-seperated text for 84 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8wcl:5 (2.65) BS01 A86 N/A N/A N/A 39030906
    2 8wcl:5 (2.65) BS02 A86 N/A N/A N/A 39030906
    3 8wcl:5 (2.65) BS03 A86 N/A N/A N/A 39030906
    4 8wcl:5 (2.65) BS04 A86 N/A N/A N/A 39030906
    5 8wcl:5 (2.65) BS05 A86 N/A N/A N/A 39030906
    6 8wcl:5 (2.65) BS06 CLA N/A N/A N/A 39030906
    7 8wcl:5 (2.65) BS07 CLA N/A N/A N/A 39030906
    8 8wcl:5 (2.65) BS08 KC2 N/A N/A N/A 39030906
    9 8wcl:5 (2.65) BS09 CLA N/A N/A N/A 39030906
    10 8wcl:5 (2.65) BS10 KC2 N/A N/A N/A 39030906
    11 8wcl:5 (2.65) BS11 KC1 N/A N/A N/A 39030906
    12 8wcl:5 (2.65) BS12 CLA N/A N/A N/A 39030906
    13 8wcl:5 (2.65) BS13 KC1 N/A N/A N/A 39030906
    14 8wcl:5 (2.65) BS14 CLA N/A N/A N/A 39030906
    15 8wcl:5 (2.65) BS15 CLA N/A N/A N/A 39030906
    16 8wcl:5 (2.65) BS16 A86 N/A N/A N/A 39030906
    17 8wcl:5 (2.65) BS17 A86 N/A N/A N/A 39030906
    18 8wcl:5 (2.65) BS18 CLA N/A N/A N/A 39030906
    19 8wcl:6 (2.65) BS01 A86 N/A N/A N/A 39030906
    20 8wcl:6 (2.65) BS02 A86 N/A N/A N/A 39030906
    21 8wcl:6 (2.65) BS03 A86 N/A N/A N/A 39030906
    22 8wcl:6 (2.65) BS04 A86 N/A N/A N/A 39030906
    23 8wcl:6 (2.65) BS05 CLA N/A N/A N/A 39030906
    24 8wcl:6 (2.65) BS06 CLA N/A N/A N/A 39030906
    25 8wcl:6 (2.65) BS07 KC2 N/A N/A N/A 39030906
    26 8wcl:6 (2.65) BS08 CLA N/A N/A N/A 39030906
    27 8wcl:6 (2.65) BS09 KC2 N/A N/A N/A 39030906
    28 8wcl:6 (2.65) BS10 KC1 N/A N/A N/A 39030906
    29 8wcl:6 (2.65) BS11 CLA N/A N/A N/A 39030906
    30 8wcl:6 (2.65) BS12 KC1 N/A N/A N/A 39030906
    31 8wcl:6 (2.65) BS13 CLA N/A N/A N/A 39030906
    32 8wcl:6 (2.65) BS14 CLA N/A N/A N/A 39030906
    33 8wcl:6 (2.65) BS15 A86 N/A N/A N/A 39030906
    34 8wcl:6 (2.65) BS16 A86 N/A N/A N/A 39030906
    35 8wcl:7 (2.65) BS01 CLA N/A N/A N/A 39030906
    36 8wcl:7 (2.65) BS02 A86 N/A N/A N/A 39030906
    37 8wcl:7 (2.65) BS03 A86 N/A N/A N/A 39030906
    38 8wcl:7 (2.65) BS04 A86 N/A N/A N/A 39030906
    39 8wcl:7 (2.65) BS05 A86 N/A N/A N/A 39030906
    40 8wcl:7 (2.65) BS06 A86 N/A N/A N/A 39030906
    41 8wcl:7 (2.65) BS07 A86 N/A N/A N/A 39030906
    42 8wcl:7 (2.65) BS08 CLA N/A N/A N/A 39030906
    43 8wcl:7 (2.65) BS09 CLA N/A N/A N/A 39030906
    44 8wcl:7 (2.65) BS10 KC2 N/A N/A N/A 39030906
    45 8wcl:7 (2.65) BS11 CLA N/A N/A N/A 39030906
    46 8wcl:7 (2.65) BS12 KC2 N/A N/A N/A 39030906
    47 8wcl:7 (2.65) BS13 KC1 N/A N/A N/A 39030906
    48 8wcl:7 (2.65) BS14 CLA N/A N/A N/A 39030906
    49 8wcl:7 (2.65) BS15 KC1 N/A N/A N/A 39030906
    50 8wcl:7 (2.65) BS16 CLA N/A N/A N/A 39030906
    51 8wcl:8 (2.65) BS01 CLA N/A N/A N/A 39030906
    52 8wcl:8 (2.65) BS02 A86 N/A N/A N/A 39030906
    53 8wcl:8 (2.65) BS03 A86 N/A N/A N/A 39030906
    54 8wcl:8 (2.65) BS04 A86 N/A N/A N/A 39030906
    55 8wcl:8 (2.65) BS05 A86 N/A N/A N/A 39030906
    56 8wcl:8 (2.65) BS06 A86 N/A N/A N/A 39030906
    57 8wcl:8 (2.65) BS07 A86 N/A N/A N/A 39030906
    58 8wcl:8 (2.65) BS08 CLA N/A N/A N/A 39030906
    59 8wcl:8 (2.65) BS09 KC2 N/A N/A N/A 39030906
    60 8wcl:8 (2.65) BS10 CLA N/A N/A N/A 39030906
    61 8wcl:8 (2.65) BS11 KC2 N/A N/A N/A 39030906
    62 8wcl:8 (2.65) BS12 KC1 N/A N/A N/A 39030906
    63 8wcl:8 (2.65) BS13 CLA N/A N/A N/A 39030906
    64 8wcl:8 (2.65) BS14 KC1 N/A N/A N/A 39030906
    65 8wcl:8 (2.65) BS15 CLA N/A N/A N/A 39030906
    66 8wcl:8 (2.65) BS16 CLA N/A N/A N/A 39030906
    67 8wcl:8 (2.65) BS17 CLA N/A N/A N/A 39030906
    68 8wcl:8 (2.65) BS18 A86 N/A N/A N/A 39030906
    69 8wcl:9 (2.65) BS01 A86 N/A N/A N/A 39030906
    70 8wcl:9 (2.65) BS02 A86 N/A N/A N/A 39030906
    71 8wcl:9 (2.65) BS03 A86 N/A N/A N/A 39030906
    72 8wcl:9 (2.65) BS04 A86 N/A N/A N/A 39030906
    73 8wcl:9 (2.65) BS05 A86 N/A N/A N/A 39030906
    74 8wcl:9 (2.65) BS06 A86 N/A N/A N/A 39030906
    75 8wcl:9 (2.65) BS07 CLA N/A N/A N/A 39030906
    76 8wcl:9 (2.65) BS08 CLA N/A N/A N/A 39030906
    77 8wcl:9 (2.65) BS09 KC2 N/A N/A N/A 39030906
    78 8wcl:9 (2.65) BS10 CLA N/A N/A N/A 39030906
    79 8wcl:9 (2.65) BS11 CLA N/A N/A N/A 39030906
    80 8wcl:9 (2.65) BS12 CLA N/A N/A N/A 39030906
    81 8wcl:9 (2.65) BS13 CLA N/A N/A N/A 39030906
    82 8wcl:9 (2.65) BS14 KC1 N/A N/A N/A 39030906
    83 8wcl:9 (2.65) BS15 CLA N/A N/A N/A 39030906
    84 8wcl:9 (2.65) BS16 CLA N/A N/A N/A 39030906
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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