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BioLiP
Download all results in tab-seperated text for 26 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8qxu:A (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    2 8qxu:A (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    3 8qxu:B (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    4 8qxu:B (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    5 8qxu:C (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    6 8qxu:C (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    7 8qxu:D (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    8 8qxu:D (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    9 8qxu:E (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    10 8qxu:E (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    11 8qxu:F (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    12 8qxu:G (12.0) BS01 ATP N/A GO:0000287 ... P0A6F5 39169181
    13 8qxu:H (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    14 8qxu:H (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    15 8qxu:I (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    16 8qxu:I (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    17 8qxu:J (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    18 8qxu:J (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    19 8qxu:K (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    20 8qxu:K (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    21 8qxu:L (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    22 8qxu:L (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    23 8qxu:M (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    24 8qxu:M (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    25 8qxu:N (12.0) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    26 8qxu:N (12.0) BS02 MG N/A GO:0000287 ... P0A6F5 39169181
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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