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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 137 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8b64:A (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    2 8b64:A (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    3 8b64:A (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    4 8b64:B (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    5 8b64:B (2.589) BS02 BCL ? GO:0005886 ... P02950 36738736
    6 8b64:B (2.589) BS03 SPO ? GO:0005886 ... P02950 36738736
    7 8b64:B (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    8 8b64:D (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    9 8b64:D (2.589) BS02 BCL ? GO:0005886 ... P02950 36738736
    10 8b64:D (2.589) BS03 SPO ? GO:0005886 ... P02950 36738736
    11 8b64:D (2.589) BS04 BCL ? GO:0005886 ... P02950 36738736
    12 8b64:D (2.589) BS05 SPO ? GO:0005886 ... P02950 36738736
    13 8b64:E (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    14 8b64:E (2.589) BS02 BCL ? GO:0005886 ... P02950 36738736
    15 8b64:E (2.589) BS03 SPO ? GO:0005886 ... P02950 36738736
    16 8b64:E (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    17 8b64:F (2.589) BS01 SPO ? GO:0005886 ... P02950 36738736
    18 8b64:F (2.589) BS02 BCL ? GO:0005886 ... P02950 36738736
    19 8b64:F (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    20 8b64:F (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    21 8b64:G (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    22 8b64:G (2.589) BS02 BCL ? GO:0005886 ... P02950 36738736
    23 8b64:G (2.589) BS03 SPO ? GO:0005886 ... P02950 36738736
    24 8b64:G (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    25 8b64:I (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    26 8b64:I (2.589) BS02 BCL ? GO:0005886 ... P02950 36738736
    27 8b64:I (2.589) BS03 SPO ? GO:0005886 ... P02950 36738736
    28 8b64:I (2.589) BS04 BCL ? GO:0005886 ... P02950 36738736
    29 8b64:I (2.589) BS05 SPO ? GO:0005886 ... P02950 36738736
    30 8b64:J (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    31 8b64:J (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    32 8b64:J (2.589) BS03 SPO ? GO:0005886 ... P02950 36738736
    33 8b64:J (2.589) BS04 BCL ? GO:0005886 ... P02950 36738736
    34 8b64:K (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    35 8b64:K (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    36 8b64:K (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    37 8b64:K (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    38 8b64:L (2.589) BS01 BCL ? GO:0009772 ... P19057 36738736
    39 8b64:L (2.589) BS02 BPH ? GO:0009772 ... P19057 36738736
    40 8b64:L (2.589) BS03 U10 ? GO:0009772 ... P19057 36738736
    41 8b64:L (2.589) BS04 U10 ? GO:0009772 ... P19057 36738736
    42 8b64:L (2.589) BS05 BCL ? GO:0009772 ... P19057 36738736
    43 8b64:L (2.589) BS06 FE ? GO:0009772 ... P19057 36738736
    44 8b64:L (2.589) BS07 U10 ? GO:0009772 ... P19057 36738736
    45 8b64:L (2.589) BS08 BCL ? GO:0009772 ... P19057 36738736
    46 8b64:L (2.589) BS09 BPH ? GO:0009772 ... P19057 36738736
    47 8b64:M (2.589) BS01 BPH ? GO:0009772 ... P11847 36738736
    48 8b64:M (2.589) BS02 U10 ? GO:0009772 ... P11847 36738736
    49 8b64:M (2.589) BS03 BCL ? GO:0009772 ... P11847 36738736
    50 8b64:M (2.589) BS04 FE ? GO:0009772 ... P11847 36738736
    51 8b64:M (2.589) BS05 U10 ? GO:0009772 ... P11847 36738736
    52 8b64:M (2.589) BS06 SPO ? GO:0009772 ... P11847 36738736
    53 8b64:M (2.589) BS07 BCL ? GO:0009772 ... P11847 36738736
    54 8b64:M (2.589) BS08 BCL ? GO:0009772 ... P11847 36738736
    55 8b64:M (2.589) BS09 BPH ? GO:0009772 ... P11847 36738736
    56 8b64:N (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    57 8b64:N (2.589) BS02 BCL ? GO:0005886 ... P02950 36738736
    58 8b64:N (2.589) BS03 SPO ? GO:0005886 ... P02950 36738736
    59 8b64:N (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    60 8b64:O (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    61 8b64:O (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    62 8b64:O (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    63 8b64:O (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    64 8b64:R (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    65 8b64:R (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    66 8b64:R (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    67 8b64:R (2.589) BS04 SPO ? GO:0005886 ... P02950 36738736
    68 8b64:S (2.589) BS01 SPO ? GO:0005886 ... P02950 36738736
    69 8b64:S (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    70 8b64:S (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    71 8b64:S (2.589) BS04 BCL ? GO:0005886 ... P02950 36738736
    72 8b64:T (2.589) BS01 BCL ? GO:0005886 ... P02950 36738736
    73 8b64:T (2.589) BS02 SPO ? GO:0005886 ... P02950 36738736
    74 8b64:T (2.589) BS03 BCL ? GO:0005886 ... P02950 36738736
    75 8b64:X (2.589) BS01 SPO ? GO:0005886 ... P26240 36738736
    76 8b64:a (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    77 8b64:a (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    78 8b64:a (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    79 8b64:a (2.589) BS04 BCL ? GO:0005886 ... P02948 36738736
    80 8b64:b (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    81 8b64:b (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    82 8b64:b (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    83 8b64:b (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    84 8b64:d (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    85 8b64:d (2.589) BS02 SPO ? GO:0005886 ... P02948 36738736
    86 8b64:d (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    87 8b64:d (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    88 8b64:e (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    89 8b64:e (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    90 8b64:e (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    91 8b64:e (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    92 8b64:e (2.589) BS05 SPO ? GO:0005886 ... P02948 36738736
    93 8b64:f (2.589) BS01 SPO ? GO:0005886 ... P02948 36738736
    94 8b64:f (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    95 8b64:f (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    96 8b64:f (2.589) BS04 BCL ? GO:0005886 ... P02948 36738736
    97 8b64:f (2.589) BS05 SPO ? GO:0005886 ... P02948 36738736
    98 8b64:g (2.589) BS01 SPO ? GO:0005886 ... P02948 36738736
    99 8b64:g (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    100 8b64:g (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    101 8b64:g (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    102 8b64:g (2.589) BS05 SPO ? GO:0005886 ... P02948 36738736
    103 8b64:i (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    104 8b64:i (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    105 8b64:i (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    106 8b64:i (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    107 8b64:j (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    108 8b64:j (2.589) BS02 SPO ? GO:0005886 ... P02948 36738736
    109 8b64:j (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    110 8b64:k (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    111 8b64:k (2.589) BS02 SPO ? GO:0005886 ... P02948 36738736
    112 8b64:k (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    113 8b64:k (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    114 8b64:n (2.589) BS01 SPO ? GO:0005886 ... P02948 36738736
    115 8b64:n (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    116 8b64:n (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    117 8b64:n (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    118 8b64:n (2.589) BS05 SPO ? GO:0005886 ... P02948 36738736
    119 8b64:o (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    120 8b64:o (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    121 8b64:o (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    122 8b64:o (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    123 8b64:r (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    124 8b64:r (2.589) BS02 SPO ? GO:0005886 ... P02948 36738736
    125 8b64:r (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    126 8b64:r (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    127 8b64:s (2.589) BS01 SPO ? GO:0005886 ... P02948 36738736
    128 8b64:s (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    129 8b64:s (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736
    130 8b64:s (2.589) BS04 SPO ? GO:0005886 ... P02948 36738736
    131 8b64:t (2.589) BS01 BCL ? GO:0005886 ... P02948 36738736
    132 8b64:t (2.589) BS02 SPO ? GO:0005886 ... P02948 36738736
    133 8b64:t (2.589) BS03 SPO ? GO:0005886 ... P02948 36738736
    134 8b64:t (2.589) BS04 BCL ? GO:0005886 ... P02948 36738736
    135 8b64:u (2.589) BS01 SPO ? GO:0005886 ... P02948 36738736
    136 8b64:u (2.589) BS02 BCL ? GO:0005886 ... P02948 36738736
    137 8b64:u (2.589) BS03 BCL ? GO:0005886 ... P02948 36738736

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218