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BioLiP
Download all results in tab-seperated text for 72 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7umt:a (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    2 7umt:a (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    3 7umt:a (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    4 7umt:a (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    5 7umt:b (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    6 7umt:b (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    7 7umt:b (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    8 7umt:b (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    9 7umt:c (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    10 7umt:c (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    11 7umt:c (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    12 7umt:c (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    13 7umt:d (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    14 7umt:d (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    15 7umt:d (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    16 7umt:d (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    17 7umt:e (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    18 7umt:e (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    19 7umt:e (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    20 7umt:e (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    21 7umt:f (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    22 7umt:f (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    23 7umt:f (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    24 7umt:f (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    25 7umt:g (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    26 7umt:g (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    27 7umt:g (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    28 7umt:g (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    29 7umt:h (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    30 7umt:h (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    31 7umt:h (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    32 7umt:h (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    33 7umt:i (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    34 7umt:i (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    35 7umt:i (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    36 7umt:i (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    37 7umt:j (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    38 7umt:j (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39 7umt:j (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    40 7umt:j (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    41 7umt:k (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    42 7umt:k (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    43 7umt:k (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    44 7umt:k (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    45 7umt:l (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    46 7umt:l (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    47 7umt:l (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    48 7umt:l (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    49 7umt:m (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    50 7umt:m (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    51 7umt:m (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    52 7umt:m (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    53 7umt:n (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    54 7umt:n (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    55 7umt:n (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    56 7umt:n (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    57 7umt:o (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    58 7umt:o (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    59 7umt:o (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    60 7umt:o (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    61 7umt:p (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    62 7umt:p (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    63 7umt:p (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    64 7umt:p (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    65 7umt:q (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    66 7umt:q (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    67 7umt:q (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    68 7umt:q (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    69 7umt:r (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    70 7umt:r (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    71 7umt:r (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    72 7umt:r (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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