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BioLiP
Download all results in tab-seperated text for 19 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7arc:B (2.88) BS01 SF4 ? GO:0005739 ... A0A7S0V8A9 33768254
    2 7arc:D (2.88) BS01 SF4 ? GO:0016651 ... A0A7S0VKR5 33768254
    3 7arc:E (2.88) BS01 FES N/A GO:0016491 ... N/A 33768254
    4 7arc:F (2.88) BS01 FMN 7.1.1.2 GO:0005739 ... A0A7S0V3A3 33768254
    5 7arc:F (2.88) BS02 SF4 7.1.1.2 GO:0005739 ... A0A7S0V3A3 33768254
    6 7arc:G (2.88) BS01 peptide N/A GO:0008137 ... N/A 33768254
    7 7arc:G (2.88) BS02 FES N/A GO:0008137 ... N/A 33768254
    8 7arc:G (2.88) BS03 SF4 N/A GO:0008137 ... N/A 33768254
    9 7arc:G (2.88) BS04 SF4 N/A GO:0008137 ... N/A 33768254
    10 7arc:I (2.88) BS01 peptide ? GO:0003954 ... A0A7S0UQ60 33768254
    11 7arc:I (2.88) BS02 SF4 ? GO:0003954 ... A0A7S0UQ60 33768254
    12 7arc:I (2.88) BS03 SF4 ? GO:0003954 ... A0A7S0UQ60 33768254
    13 7arc:P (2.88) BS01 peptide N/A N/A N/A 33768254
    14 7arc:P (2.88) BS02 NDP N/A N/A N/A 33768254
    15 7arc:Q (2.88) BS01 peptide N/A GO:0022900 ... N/A 33768254
    16 7arc:R (2.88) BS01 peptide N/A N/A N/A 33768254
    17 7arc:R (2.88) BS02 ZN N/A N/A N/A 33768254
    18 7arc:U (2.88) BS01 8Q1 ? GO:0000035 ... A0A7S0UWZ2 33768254
    19 7arc:W (2.88) BS01 8Q1 ? GO:0005739 ... A0A7S0UM40 33768254
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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