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BioLiP
Download all results in tab-seperated text for 42 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6lt4:A (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    2 6lt4:A (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    3 6lt4:A (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    4 6lt4:B (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    5 6lt4:B (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    6 6lt4:B (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    7 6lt4:C (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    8 6lt4:C (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    9 6lt4:C (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    10 6lt4:D (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    11 6lt4:D (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    12 6lt4:D (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    13 6lt4:E (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    14 6lt4:E (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    15 6lt4:E (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    16 6lt4:F (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    17 6lt4:F (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    18 6lt4:F (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    19 6lt4:G (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    20 6lt4:G (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    21 6lt4:G (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    22 6lt4:H (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    23 6lt4:H (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    24 6lt4:H (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    25 6lt4:I (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    26 6lt4:I (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    27 6lt4:I (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    28 6lt4:J (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    29 6lt4:J (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    30 6lt4:J (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    31 6lt4:K (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    32 6lt4:K (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    33 6lt4:K (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    34 6lt4:L (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    35 6lt4:L (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    36 6lt4:L (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    37 6lt4:M (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    38 6lt4:M (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    39 6lt4:M (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    40 6lt4:N (4.5) BS01 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    41 6lt4:N (4.5) BS02 AGS ? GO:0005524 ... A0A0H2ZMB9 32910525
    42 6lt4:N (4.5) BS03 MG ? GO:0005524 ... A0A0H2ZMB9 32910525
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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