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BioLiP
Download all results in tab-seperated text for 27 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5chc:A (2.38) BS01 SF4 ? GO:0009061 ... G8QM55 26940877
    2 5chc:A (2.38) BS02 MO ? GO:0009061 ... G8QM55 26940877
    3 5chc:A (2.38) BS03 MGD ? GO:0009061 ... G8QM55 26940877
    4 5chc:A (2.38) BS04 MD1 ? GO:0009061 ... G8QM55 26940877
    5 5chc:A (2.38) BS05 BSY ? GO:0009061 ... G8QM55 26940877
    6 5chc:B (2.38) BS01 F3S ? GO:0009055 ... G8QM54 26940877
    7 5chc:B (2.38) BS02 SF4 ? GO:0009055 ... G8QM54 26940877
    8 5chc:B (2.38) BS03 SF4 ? GO:0009055 ... G8QM54 26940877
    9 5chc:B (2.38) BS04 SF4 ? GO:0009055 ... G8QM54 26940877
    10 5chc:C (2.38) BS01 SF4 ? GO:0009061 ... G8QM55 26940877
    11 5chc:C (2.38) BS02 MO ? GO:0009061 ... G8QM55 26940877
    12 5chc:C (2.38) BS03 MGD ? GO:0009061 ... G8QM55 26940877
    13 5chc:C (2.38) BS04 MD1 ? GO:0009061 ... G8QM55 26940877
    14 5chc:C (2.38) BS05 BSY ? GO:0009061 ... G8QM55 26940877
    15 5chc:D (2.38) BS01 F3S ? GO:0009055 ... G8QM54 26940877
    16 5chc:D (2.38) BS02 SF4 ? GO:0009055 ... G8QM54 26940877
    17 5chc:D (2.38) BS03 SF4 ? GO:0009055 ... G8QM54 26940877
    18 5chc:D (2.38) BS04 SF4 ? GO:0009055 ... G8QM54 26940877
    19 5chc:E (2.38) BS01 SF4 ? GO:0009061 ... G8QM55 26940877
    20 5chc:E (2.38) BS02 MO ? GO:0009061 ... G8QM55 26940877
    21 5chc:E (2.38) BS03 MGD ? GO:0009061 ... G8QM55 26940877
    22 5chc:E (2.38) BS04 MD1 ? GO:0009061 ... G8QM55 26940877
    23 5chc:E (2.38) BS05 BSY ? GO:0009061 ... G8QM55 26940877
    24 5chc:F (2.38) BS01 F3S ? GO:0009055 ... G8QM54 26940877
    25 5chc:F (2.38) BS02 SF4 ? GO:0009055 ... G8QM54 26940877
    26 5chc:F (2.38) BS03 SF4 ? GO:0009055 ... G8QM54 26940877
    27 5chc:F (2.38) BS04 SF4 ? GO:0009055 ... G8QM54 26940877
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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