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BioLiP
Download all results in tab-seperated text for 34 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4qry:A (2.2) BS01 RET N/A GO:0005216 ... N/A 26039169
    2 4qry:A (2.2) BS02 BR N/A GO:0005216 ... N/A 26039169
    3 4qry:A (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    4 4qry:A (2.2) BS04 RET N/A GO:0005216 ... N/A 26039169
    5 4qry:A (2.2) BS05 BR N/A GO:0005216 ... N/A 26039169
    6 4qry:A (2.2) BS06 BR N/A GO:0005216 ... N/A 26039169
    7 4qry:B (2.2) BS01 BR N/A GO:0005216 ... N/A 26039169
    8 4qry:B (2.2) BS02 RET N/A GO:0005216 ... N/A 26039169
    9 4qry:B (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    10 4qry:B (2.2) BS04 RET N/A GO:0005216 ... N/A 26039169
    11 4qry:B (2.2) BS05 BR N/A GO:0005216 ... N/A 26039169
    12 4qry:C (2.2) BS01 BR N/A GO:0005216 ... N/A 26039169
    13 4qry:C (2.2) BS02 RET N/A GO:0005216 ... N/A 26039169
    14 4qry:C (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    15 4qry:C (2.2) BS04 RET N/A GO:0005216 ... N/A 26039169
    16 4qry:C (2.2) BS05 BR N/A GO:0005216 ... N/A 26039169
    17 4qry:E (2.2) BS01 RET N/A GO:0005216 ... N/A 26039169
    18 4qry:E (2.2) BS02 BR N/A GO:0005216 ... N/A 26039169
    19 4qry:E (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    20 4qry:E (2.2) BS04 RET N/A GO:0005216 ... N/A 26039169
    21 4qry:E (2.2) BS05 BR N/A GO:0005216 ... N/A 26039169
    22 4qry:E (2.2) BS06 BR N/A GO:0005216 ... N/A 26039169
    23 4qry:F (2.2) BS01 BR N/A GO:0005216 ... N/A 26039169
    24 4qry:F (2.2) BS02 RET N/A GO:0005216 ... N/A 26039169
    25 4qry:F (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    26 4qry:F (2.2) BS04 BR N/A GO:0005216 ... N/A 26039169
    27 4qry:F (2.2) BS05 RET N/A GO:0005216 ... N/A 26039169
    28 4qry:F (2.2) BS06 BR N/A GO:0005216 ... N/A 26039169
    29 4qry:G (2.2) BS01 BR N/A GO:0005216 ... N/A 26039169
    30 4qry:G (2.2) BS02 RET N/A GO:0005216 ... N/A 26039169
    31 4qry:G (2.2) BS03 BR N/A GO:0005216 ... N/A 26039169
    32 4qry:G (2.2) BS04 BR N/A GO:0005216 ... N/A 26039169
    33 4qry:G (2.2) BS05 RET N/A GO:0005216 ... N/A 26039169
    34 4qry:G (2.2) BS06 BR N/A GO:0005216 ... N/A 26039169
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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