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BioLiP
Download all results in tab-seperated text for 60 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7utd:A (2.19) BS01 FCO 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    2 7utd:A (2.19) BS02 MG 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    3 7utd:A (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    4 7utd:B (2.19) BS01 MQ9 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    5 7utd:B (2.19) BS02 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    6 7utd:B (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    7 7utd:B (2.19) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    8 7utd:C (2.19) BS01 FCO 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    9 7utd:C (2.19) BS02 MG 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    10 7utd:C (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    11 7utd:D (2.19) BS01 MQ9 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    12 7utd:D (2.19) BS02 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    13 7utd:D (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    14 7utd:D (2.19) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    15 7utd:E (2.19) BS01 FCO 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    16 7utd:E (2.19) BS02 MG 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    17 7utd:E (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    18 7utd:F (2.19) BS01 MQ9 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    19 7utd:F (2.19) BS02 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    20 7utd:F (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    21 7utd:F (2.19) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    22 7utd:G (2.19) BS01 FCO 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    23 7utd:G (2.19) BS02 MG 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    24 7utd:G (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    25 7utd:H (2.19) BS01 MQ9 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    26 7utd:H (2.19) BS02 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    27 7utd:H (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    28 7utd:H (2.19) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    29 7utd:I (2.19) BS01 FCO 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    30 7utd:I (2.19) BS02 MG 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    31 7utd:I (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    32 7utd:J (2.19) BS01 MQ9 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    33 7utd:J (2.19) BS02 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    34 7utd:J (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    35 7utd:J (2.19) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    36 7utd:K (2.19) BS01 FCO 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    37 7utd:K (2.19) BS02 MG 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    38 7utd:K (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    39 7utd:L (2.19) BS01 MQ9 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    40 7utd:L (2.19) BS02 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    41 7utd:L (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    42 7utd:L (2.19) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    43 7utd:M (2.19) BS01 FCO 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    44 7utd:M (2.19) BS02 MG 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    45 7utd:M (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    46 7utd:N (2.19) BS01 MQ9 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    47 7utd:N (2.19) BS02 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    48 7utd:N (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    49 7utd:N (2.19) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    50 7utd:O (2.19) BS01 FCO 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    51 7utd:O (2.19) BS02 MG 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    52 7utd:O (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM7 36890228
    53 7utd:P (2.19) BS01 MQ9 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    54 7utd:P (2.19) BS02 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    55 7utd:P (2.19) BS03 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    56 7utd:P (2.19) BS04 F3S 1.12.99.6 GO:0008901 ... A0QUM6 36890228
    57 7utd:Q (2.19) BS01 MQ9 ? N/A A0QUM5 36890228
    58 7utd:R (2.19) BS01 MQ9 ? N/A A0QUM5 36890228
    59 7utd:S (2.19) BS01 MQ9 ? N/A A0QUM5 36890228
    60 7utd:T (2.19) BS01 MQ9 ? N/A A0QUM5 36890228
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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