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BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    889801 8wmw:i (3.3) BS05 CLA N/A N/A N/A 38734819
    889802 8wmw:i (3.3) BS06 CLA N/A N/A N/A 38734819
    889803 8wmw:i (3.3) BS07 CLA N/A N/A N/A 38734819
    889804 8wmw:i (3.3) BS08 KC2 N/A N/A N/A 38734819
    889805 8wmw:i (3.3) BS09 CLA N/A N/A N/A 38734819
    889806 8wmw:i (3.3) BS10 CLA N/A N/A N/A 38734819
    889807 8wmw:i (3.3) BS11 II0 N/A N/A N/A 38734819
    889808 8wmw:i (3.3) BS12 II0 N/A N/A N/A 38734819
    889809 8wmw:i (3.3) BS13 II0 N/A N/A N/A 38734819
    889810 8wmw:i (3.3) BS14 KC2 N/A N/A N/A 38734819
    889811 8wmw:i (3.3) BS15 WVN N/A N/A N/A 38734819
    889812 8wmw:j (3.3) BS01 II0 N/A N/A N/A 38734819
    889813 8wmw:j (3.3) BS02 CLA N/A N/A N/A 38734819
    889814 8wmw:j (3.3) BS03 II0 N/A N/A N/A 38734819
    889815 8wmw:j (3.3) BS04 WVN N/A N/A N/A 38734819
    889816 8wmw:j (3.3) BS05 CLA N/A N/A N/A 38734819
    889817 8wmw:j (3.3) BS06 CLA N/A N/A N/A 38734819
    889818 8wmw:j (3.3) BS07 CLA N/A N/A N/A 38734819
    889819 8wmw:j (3.3) BS08 CLA N/A N/A N/A 38734819
    889820 8wmw:j (3.3) BS09 CLA N/A N/A N/A 38734819
    889821 8wmw:j (3.3) BS10 CLA N/A N/A N/A 38734819
    889822 8wmw:j (3.3) BS11 CLA N/A N/A N/A 38734819
    889823 8wmw:j (3.3) BS12 CLA N/A N/A N/A 38734819
    889824 8wmw:j (3.3) BS13 CLA N/A N/A N/A 38734819
    889825 8wmw:j (3.3) BS14 KC2 N/A N/A N/A 38734819
    889826 8wmw:j (3.3) BS15 CLA N/A N/A N/A 38734819
    889827 8wmw:j (3.3) BS16 CLA N/A N/A N/A 38734819
    889828 8wmw:j (3.3) BS17 II0 N/A N/A N/A 38734819
    889829 8wmw:j (3.3) BS18 II0 N/A N/A N/A 38734819
    889830 8wmw:j (3.3) BS19 IHT N/A N/A N/A 38734819
    889831 8wmw:j (3.3) BS20 II0 N/A N/A N/A 38734819
    889832 8wmw:k (3.3) BS01 CLA N/A N/A N/A 38734819
    889833 8wmw:k (3.3) BS02 CLA N/A N/A N/A 38734819
    889834 8wmw:k (3.3) BS03 CLA N/A N/A N/A 38734819
    889835 8wmw:k (3.3) BS04 CLA N/A N/A N/A 38734819
    889836 8wmw:k (3.3) BS05 CLA N/A N/A N/A 38734819
    889837 8wmw:k (3.3) BS06 CLA N/A N/A N/A 38734819
    889838 8wmw:k (3.3) BS07 CLA N/A N/A N/A 38734819
    889839 8wmw:k (3.3) BS08 CLA N/A N/A N/A 38734819
    889840 8wmw:k (3.3) BS09 CLA N/A N/A N/A 38734819
    889841 8wmw:k (3.3) BS10 KC2 N/A N/A N/A 38734819
    889842 8wmw:k (3.3) BS11 KC2 N/A N/A N/A 38734819
    889843 8wmw:k (3.3) BS12 KC2 N/A N/A N/A 38734819
    889844 8wmw:k (3.3) BS13 CLA N/A N/A N/A 38734819
    889845 8wmw:k (3.3) BS14 II0 N/A N/A N/A 38734819
    889846 8wmw:k (3.3) BS15 II0 N/A N/A N/A 38734819
    889847 8wmw:k (3.3) BS16 II0 N/A N/A N/A 38734819
    889848 8wmw:k (3.3) BS17 IHT N/A N/A N/A 38734819
    889849 8wmw:k (3.3) BS18 II0 N/A N/A N/A 38734819
    889850 8wmw:k (3.3) BS19 II0 N/A N/A N/A 38734819
    889851 8wmw:k (3.3) BS20 CLA N/A N/A N/A 38734819
    889852 8wmy:A (1.91) BS01 ADP 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    889853 8wmy:A (1.91) BS02 MG 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    889854 8wmy:A (1.91) BS03 MG 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    889855 8wmy:B (1.91) BS01 ADP 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    889856 8wmy:B (1.91) BS02 MG 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    889857 8wmy:B (1.91) BS03 MG 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    889858 8wnf:A (1.9) BS01 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    889859 8wng:A (1.92) BS01 ILE 6.1.1.5 GO:0000049 ... P56456 38246751
    889860 8wng:A (1.92) BS02 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    889861 8wni:A (1.95) BS01 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    889862 8wni:A (1.95) BS02 VAL 6.1.1.5 GO:0000049 ... P56456 38246751
    889863 8wnj:A (1.78) BS01 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    889864 8wnj:A (1.78) BS02 GV6 6.1.1.5 GO:0000049 ... P56456 38246751
    889865 8wnt:B (3.42) BS01 ALA ? GO:0003333 ... Q9NS82 38589439
    889866 8wnw:Q (3.5) BS01 CLA N/A N/A N/A 38734819
    889867 8wny:B (3.5) BS01 DSN ? GO:0003333 ... Q9NS82 38589439
    889868 8wo2:A (2.34) BS01 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    889869 8wo2:A (2.34) BS02 WN9 6.1.1.5 GO:0000049 ... P56456 38246751
    889870 8wo3:A (2.2) BS01 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    889871 8wo3:A (2.2) BS02 MRC 6.1.1.5 GO:0000049 ... P56456 38246751
    889872 8wo5:A0 (7.4) BS01 peptide N/A N/A P16437 N/A
    889873 8wo5:A0 (7.4) BS02 peptide N/A N/A P16437 N/A
    889874 8wo5:A5 (7.4) BS01 peptide N/A N/A P26462 N/A
    889875 8wo5:A6 (7.4) BS01 peptide N/A N/A P16437 N/A
    889876 8wo5:A6 (7.4) BS02 peptide N/A N/A P16437 N/A
    889877 8wo5:A7 (7.4) BS01 peptide N/A N/A P16437 N/A
    889878 8wo5:A7 (7.4) BS02 peptide N/A N/A P16437 N/A
    889879 8wo5:A8 (7.4) BS01 peptide N/A N/A P16437 N/A
    889880 8wo5:A8 (7.4) BS02 peptide N/A N/A P16437 N/A
    889881 8wo5:A9 (7.4) BS01 peptide N/A N/A P16437 N/A
    889882 8wo5:A9 (7.4) BS02 peptide N/A N/A P16437 N/A
    889883 8wo5:AA (7.4) BS01 peptide N/A N/A P16323 N/A
    889884 8wo5:AA (7.4) BS02 peptide N/A N/A P16323 N/A
    889885 8wo5:AB (7.4) BS01 peptide N/A N/A P16323 N/A
    889886 8wo5:AC (7.4) BS01 peptide N/A N/A P16323 N/A
    889887 8wo5:AC (7.4) BS02 peptide N/A N/A P16323 N/A
    889888 8wo5:AE (7.4) BS01 peptide N/A N/A P16323 N/A
    889889 8wo5:AV (7.4) BS01 peptide N/A N/A P15928 N/A
    889890 8wo5:Ao (7.4) BS01 peptide N/A N/A P15928 N/A
    889891 8wo5:B5 (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889892 8wo5:B5 (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889893 8wo5:BA (7.4) BS01 peptide N/A N/A P0A1I7 N/A
    889894 8wo5:BA (7.4) BS02 peptide N/A N/A P0A1I7 N/A
    889895 8wo5:BB (7.4) BS01 peptide N/A N/A P0A1I7 N/A
    889896 8wo5:BC (7.4) BS01 peptide N/A N/A P0A1I7 N/A
    889897 8wo5:BD (7.4) BS01 peptide N/A N/A P0A1I7 N/A
    889898 8wo5:BE (7.4) BS01 peptide N/A N/A P0A1I7 N/A
    889899 8wo5:BF (7.4) BS01 peptide N/A N/A P0A1I7 N/A
    889900 8wo5:BV (7.4) BS01 peptide N/A N/A P15928 N/A
    889901 8wo5:Ba (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889902 8wo5:Ba (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889903 8wo5:Bg (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889904 8wo5:Bg (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889905 8wo5:Bm (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889906 8wo5:Bm (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889907 8wo5:Bs (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889908 8wo5:Bs (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889909 8wo5:By (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889910 8wo5:By (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889911 8wo5:C6 (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889912 8wo5:C6 (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889913 8wo5:CA (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889914 8wo5:CA (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889915 8wo5:CG (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889916 8wo5:CG (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889917 8wo5:CM (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889918 8wo5:CM (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889919 8wo5:CS (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889920 8wo5:CS (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889921 8wo5:CY (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889922 8wo5:CY (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889923 8wo5:Ce (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889924 8wo5:Ce (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889925 8wo5:Ck (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889926 8wo5:Ck (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889927 8wo5:Cq (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889928 8wo5:Cq (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889929 8wo5:Cw (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889930 8wo5:Cw (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889931 8wo5:D1 (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889932 8wo5:D1 (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889933 8wo5:D7 (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889934 8wo5:D7 (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889935 8wo5:DB (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889936 8wo5:DB (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889937 8wo5:DD (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889938 8wo5:DD (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889939 8wo5:DJ (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889940 8wo5:DJ (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889941 8wo5:DQ (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889942 8wo5:DQ (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889943 8wo5:DW (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889944 8wo5:DW (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889945 8wo5:Dc (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889946 8wo5:Dc (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889947 8wo5:Di (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889948 8wo5:Di (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889949 8wo5:Do (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889950 8wo5:Do (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889951 8wo5:Du (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889952 8wo5:Du (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889953 8wo5:EE (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889954 8wo5:EE (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889955 8wo5:EK (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889956 8wo5:EK (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889957 8wo5:EQ (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889958 8wo5:EQ (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889959 8wo5:EW (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889960 8wo5:EW (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889961 8wo5:Ea (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889962 8wo5:Ea (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889963 8wo5:Eg (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889964 8wo5:Eg (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889965 8wo5:Em (7.4) BS01 peptide N/A N/A P0A1J9 N/A
    889966 8wo5:Em (7.4) BS02 peptide N/A N/A P0A1J9 N/A
    889967 8wo8:A (2.78) BS01 rna 3.1.26.- GO:0003723 ... Q8U4Q7 38302756
    889968 8woe:A0 (4.3) BS01 peptide N/A N/A P16437 N/A
    889969 8woe:A0 (4.3) BS02 peptide N/A N/A P16437 N/A
    889970 8woe:A5 (4.3) BS01 peptide N/A N/A P26462 N/A
    889971 8woe:A6 (4.3) BS01 peptide N/A N/A P16437 N/A
    889972 8woe:A6 (4.3) BS02 peptide N/A N/A P16437 N/A
    889973 8woe:A7 (4.3) BS01 peptide N/A N/A P16437 N/A
    889974 8woe:A7 (4.3) BS02 peptide N/A N/A P16437 N/A
    889975 8woe:A8 (4.3) BS01 peptide N/A N/A P16437 N/A
    889976 8woe:A8 (4.3) BS02 peptide N/A N/A P16437 N/A
    889977 8woe:A9 (4.3) BS01 peptide N/A N/A P16437 N/A
    889978 8woe:A9 (4.3) BS02 peptide N/A N/A P16437 N/A
    889979 8woe:AA (4.3) BS01 peptide N/A N/A P16323 N/A
    889980 8woe:AA (4.3) BS02 peptide N/A N/A P16323 N/A
    889981 8woe:AB (4.3) BS01 peptide N/A N/A P16323 N/A
    889982 8woe:AB (4.3) BS02 peptide N/A N/A P16323 N/A
    889983 8woe:AC (4.3) BS01 peptide N/A N/A P16323 N/A
    889984 8woe:AC (4.3) BS02 peptide N/A N/A P16323 N/A
    889985 8woe:AD (4.3) BS01 peptide N/A N/A P16323 N/A
    889986 8woe:AD (4.3) BS02 peptide N/A N/A P16323 N/A
    889987 8woe:AE (4.3) BS01 peptide N/A N/A P16323 N/A
    889988 8woe:AE (4.3) BS02 peptide N/A N/A P16323 N/A
    889989 8woe:AI (4.3) BS01 peptide N/A N/A P0A1J3 N/A
    889990 8woe:AV (4.3) BS01 peptide N/A N/A P15928 N/A
    889991 8woe:Ao (4.3) BS01 peptide N/A N/A P15928 N/A
    889992 8woe:B5 (4.3) BS01 peptide N/A N/A P0A1J9 N/A
    889993 8woe:BA (4.3) BS01 peptide N/A N/A P0A1I7 N/A
    889994 8woe:BA (4.3) BS02 peptide N/A N/A P0A1I7 N/A
    889995 8woe:BB (4.3) BS01 peptide N/A N/A P0A1I7 N/A
    889996 8woe:BC (4.3) BS01 peptide N/A N/A P0A1I7 N/A
    889997 8woe:BD (4.3) BS01 peptide N/A N/A P0A1I7 N/A
    889998 8woe:BE (4.3) BS01 peptide N/A N/A P0A1I7 N/A
    889999 8woe:BF (4.3) BS01 peptide N/A N/A P0A1I7 N/A
    890000 8woe:BF (4.3) BS02 peptide N/A N/A P0A1I7 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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