Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 4424 4425 4426 4427 4428 4429 4430 4431 4432 4433 4434 4435 4436 4437 4438 4439 4440 4441 4442 4443 4444 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    886601 8wdv:I (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    886602 8wdv:I (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    886603 8wdv:I (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    886604 8wdv:I (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    886605 8wdv:I (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    886606 8wdv:I (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    886607 8wdv:J (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    886608 8wdv:J (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    886609 8wdv:J (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    886610 8wdv:K (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    886611 8wdv:K (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    886612 8wdv:K (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    886613 8wdv:K (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    886614 8wdv:K (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    886615 8wdv:K (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    886616 8wdv:L (2.24) BS01 Z41 ? GO:0009772 ... P51762 38347078
    886617 8wdv:L (2.24) BS02 BCL ? GO:0009772 ... P51762 38347078
    886618 8wdv:L (2.24) BS03 BPH ? GO:0009772 ... P51762 38347078
    886619 8wdv:L (2.24) BS04 UQ8 ? GO:0009772 ... P51762 38347078
    886620 8wdv:L (2.24) BS05 UQ8 ? GO:0009772 ... P51762 38347078
    886621 8wdv:L (2.24) BS06 BCL ? GO:0009772 ... P51762 38347078
    886622 8wdv:L (2.24) BS07 UQ8 ? GO:0009772 ... P51762 38347078
    886623 8wdv:L (2.24) BS08 FE ? GO:0009772 ... P51762 38347078
    886624 8wdv:L (2.24) BS09 BCL ? GO:0009772 ... P51762 38347078
    886625 8wdv:L (2.24) BS10 BPH ? GO:0009772 ... P51762 38347078
    886626 8wdv:L (2.24) BS11 MQ8 ? GO:0009772 ... P51762 38347078
    886627 8wdv:M (2.24) BS01 BPH ? GO:0009772 ... P51763 38347078
    886628 8wdv:M (2.24) BS02 BCL ? GO:0009772 ... P51763 38347078
    886629 8wdv:M (2.24) BS03 UQ8 ? GO:0009772 ... P51763 38347078
    886630 8wdv:M (2.24) BS04 FE ? GO:0009772 ... P51763 38347078
    886631 8wdv:M (2.24) BS05 BCL ? GO:0009772 ... P51763 38347078
    886632 8wdv:M (2.24) BS06 BCL ? GO:0009772 ... P51763 38347078
    886633 8wdv:M (2.24) BS07 BPH ? GO:0009772 ... P51763 38347078
    886634 8wdv:M (2.24) BS08 MQ8 ? GO:0009772 ... P51763 38347078
    886635 8wdv:M (2.24) BS09 CRT ? GO:0009772 ... P51763 38347078
    886636 8wdv:N (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    886637 8wdv:N (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    886638 8wdv:N (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    886639 8wdv:O (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    886640 8wdv:O (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    886641 8wdv:O (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    886642 8wdv:O (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    886643 8wdv:O (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    886644 8wdv:O (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    886645 8wdv:P (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    886646 8wdv:P (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    886647 8wdv:P (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    886648 8wdv:Q (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    886649 8wdv:Q (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    886650 8wdv:Q (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    886651 8wdv:Q (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    886652 8wdv:Q (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    886653 8wdv:Q (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    886654 8wdv:R (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    886655 8wdv:R (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    886656 8wdv:R (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    886657 8wdv:S (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    886658 8wdv:S (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    886659 8wdv:S (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    886660 8wdv:S (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    886661 8wdv:S (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    886662 8wdv:S (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    886663 8wdv:T (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    886664 8wdv:T (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    886665 8wdv:T (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    886666 8wdv:U (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    886667 8wdv:U (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    886668 8wdv:U (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    886669 8wdv:U (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    886670 8wdv:U (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    886671 8wdv:U (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    886672 8wdv:V (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    886673 8wdv:V (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    886674 8wdv:V (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    886675 8wdv:W (2.24) BS01 UQ8 ? GO:0005886 ... D3RP74 38347078
    886676 8wdv:W (2.24) BS02 CRT ? GO:0005886 ... D3RP74 38347078
    886677 8wdv:W (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    886678 8wdv:W (2.24) BS04 CA ? GO:0005886 ... D3RP74 38347078
    886679 8wdv:W (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    886680 8wdv:W (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    886681 8wdv:W (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    886682 8wdv:X (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    886683 8wdv:X (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    886684 8wdv:X (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    886685 8wdv:Y (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    886686 8wdv:Y (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    886687 8wdv:Y (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    886688 8wdv:Y (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    886689 8wdv:Y (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    886690 8wdv:Y (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    886691 8wdv:Z (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    886692 8wdv:Z (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    886693 8wdv:Z (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    886694 8wdv:Z (2.24) BS04 BCL ? GO:0005886 ... D3RP68 38347078
    886695 8wdx:A (1.65) BS01 W6K ? GO:0005324 ... P15090 38043490
    886696 8wdy:A (2.69) BS01 ZN N/A N/A Q9BYF1 38467833
    886697 8wdz:A (2.71) BS01 ZN N/A N/A Q9BYF1 38467833
    886698 8we0:A (2.8) BS01 ZN N/A N/A Q9BYF1 38467833
    886699 8we1:A (2.47) BS01 ZN N/A N/A Q9BYF1 38467833
    886700 8we2:A (2.11) BS01 peptide N/A N/A P63104 N/A
    886701 8we2:B (2.11) BS01 peptide N/A N/A P63104 N/A
    886702 8we3:A (1.82) BS01 W6B ? GO:0005324 ... P15090 38043490
    886703 8we4:A (2.91) BS01 ZN N/A N/A Q9BYF1 38467833
    886704 8we6:A (2.9) BS01 CA ? GO:0002520 ... Q13936 37972591
    886705 8we6:A (2.9) BS02 CLR ? GO:0002520 ... Q13936 37972591
    886706 8we6:A (2.9) BS03 CLR ? GO:0002520 ... Q13936 37972591
    886707 8we6:A (2.9) BS04 CLR ? GO:0002520 ... Q13936 37972591
    886708 8we6:A (2.9) BS05 CLR ? GO:0002520 ... Q13936 37972591
    886709 8we6:A (2.9) BS06 PT5 ? GO:0002520 ... Q13936 37972591
    886710 8we6:D (2.9) BS01 CA ? N/A P54289 37972591
    886711 8we7:A (3.2) BS01 CA ? GO:0002520 ... Q13936 37972591
    886712 8we7:A (3.2) BS02 CLR ? GO:0002520 ... Q13936 37972591
    886713 8we7:A (3.2) BS03 CLR ? GO:0002520 ... Q13936 37972591
    886714 8we7:D (3.2) BS01 CA ? N/A P54289 37972591
    886715 8we8:A (2.9) BS01 CA ? GO:0002520 ... Q13936 37972591
    886716 8we8:A (2.9) BS02 CLR ? GO:0002520 ... Q13936 37972591
    886717 8we8:A (2.9) BS03 CLR ? GO:0002520 ... Q13936 37972591
    886718 8we8:A (2.9) BS04 CLR ? GO:0002520 ... Q13936 37972591
    886719 8we8:A (2.9) BS05 CLR ? GO:0002520 ... Q13936 37972591
    886720 8we8:A (2.9) BS06 PT5 ? GO:0002520 ... Q13936 37972591
    886721 8we8:A (2.9) BS07 6UB ? GO:0002520 ... Q13936 37972591
    886722 8we8:A (2.9) BS08 CLR ? GO:0002520 ... Q13936 37972591
    886723 8we8:B (2.9) BS01 CLR ? GO:0005246 ... P22947 37972591
    886724 8we8:D (2.9) BS01 CA ? N/A P54289 37972591
    886725 8we9:A (3.0) BS01 CA ? GO:0002520 ... Q13936 37972591
    886726 8we9:A (3.0) BS02 CLR ? GO:0002520 ... Q13936 37972591
    886727 8we9:A (3.0) BS03 CLR ? GO:0002520 ... Q13936 37972591
    886728 8we9:A (3.0) BS04 CLR ? GO:0002520 ... Q13936 37972591
    886729 8we9:A (3.0) BS05 PT5 ? GO:0002520 ... Q13936 37972591
    886730 8we9:D (3.0) BS01 CA ? N/A P54289 37972591
    886731 8wea:A (3.2) BS01 9Z9 ? GO:0002520 ... Q13936 37972591
    886732 8wea:A (3.2) BS02 WB9 ? GO:0002520 ... Q13936 37972591
    886733 8wea:D (3.2) BS01 CA ? N/A P54289 37972591
    886734 8wej:B (2.79) BS01 HEM 1.-.-.- GO:0005515 ... P04839 38355798
    886735 8wej:B (2.79) BS02 HEM 1.-.-.- GO:0005515 ... P04839 38355798
    886736 8wej:B (2.79) BS03 NDP 1.-.-.- GO:0005515 ... P04839 38355798
    886737 8wej:B (2.79) BS04 FDA 1.-.-.- GO:0005515 ... P04839 38355798
    886738 8wej:E (2.79) BS01 peptide 3.6.5.2 GO:0001764 ... P63000 38355798
    886739 8wej:E (2.79) BS02 GTP 3.6.5.2 GO:0001764 ... P63000 38355798
    886740 8wej:E (2.79) BS03 MG 3.6.5.2 GO:0001764 ... P63000 38355798
    886741 8wem:A (1.8) BS01 ZN N/A N/A P54355 N/A
    886742 8wem:C (1.8) BS01 ZN N/A N/A P54355 N/A
    886743 8wen:A (1.97) BS01 ZN N/A N/A O05091 N/A
    886744 8wen:C (1.97) BS01 ZN N/A N/A O05091 N/A
    886745 8weo:A (1.5) BS01 ZN N/A N/A P54355 N/A
    886746 8weo:B (1.5) BS01 ZN N/A N/A P54355 N/A
    886747 8wep:A (1.2) BS01 ZN N/A N/A P00918 N/A
    886748 8weq:A (3.29) BS01 FAD N/A N/A A0A4P7SP66 N/A
    886749 8weq:B (3.29) BS01 FAD N/A N/A A0A4P7SP66 N/A
    886750 8weq:C (3.29) BS01 FAD N/A N/A A0A4P7SP66 N/A
    886751 8wer:A (1.42) BS01 ZN N/A N/A P00918 N/A
    886752 8wes:A (1.45) BS01 ZN N/A N/A P00918 N/A
    886753 8wes:A (1.45) BS02 BCT N/A N/A P00918 N/A
    886754 8wev:A (2.29) BS01 AMP N/A N/A A0A3N2H3K2 N/A
    886755 8wev:A (2.29) BS02 MG N/A N/A A0A3N2H3K2 N/A
    886756 8wev:B (2.29) BS01 AMP N/A N/A A0A3N2H3K2 N/A
    886757 8wew:A (2.5) BS01 RET N/A N/A Q18DH5 N/A
    886758 8wew:B (2.5) BS01 RET N/A N/A Q18DH5 N/A
    886759 8wew:B (2.5) BS02 MG N/A N/A Q18DH5 N/A
    886760 8wex:A (2.33) BS01 ZN ? GO:0016740 ... A0A3A6V1D8 37895170
    886761 8wex:B (2.33) BS01 ZN ? GO:0016740 ... A0A3A6V1D8 37895170
    886762 8wey:1 (1.92) BS01 CLA N/A GO:0009765 ... N/A 38442179
    886763 8wey:1 (1.92) BS02 CLA N/A GO:0009765 ... N/A 38442179
    886764 8wey:1 (1.92) BS03 CLA N/A GO:0009765 ... N/A 38442179
    886765 8wey:1 (1.92) BS04 CLA N/A GO:0009765 ... N/A 38442179
    886766 8wey:1 (1.92) BS05 CLA N/A GO:0009765 ... N/A 38442179
    886767 8wey:1 (1.92) BS06 CLA N/A GO:0009765 ... N/A 38442179
    886768 8wey:1 (1.92) BS07 CLA N/A GO:0009765 ... N/A 38442179
    886769 8wey:1 (1.92) BS08 CLA N/A GO:0009765 ... N/A 38442179
    886770 8wey:1 (1.92) BS09 CLA N/A GO:0009765 ... N/A 38442179
    886771 8wey:1 (1.92) BS10 CLA N/A GO:0009765 ... N/A 38442179
    886772 8wey:1 (1.92) BS11 CLA N/A GO:0009765 ... N/A 38442179
    886773 8wey:1 (1.92) BS12 5X6 N/A GO:0009765 ... N/A 38442179
    886774 8wey:1 (1.92) BS13 5X6 N/A GO:0009765 ... N/A 38442179
    886775 8wey:1 (1.92) BS14 5X6 N/A GO:0009765 ... N/A 38442179
    886776 8wey:1 (1.92) BS15 5X6 N/A GO:0009765 ... N/A 38442179
    886777 8wey:1 (1.92) BS16 5X6 N/A GO:0009765 ... N/A 38442179
    886778 8wey:2 (1.92) BS01 CLA N/A GO:0009765 ... N/A 38442179
    886779 8wey:2 (1.92) BS02 5X6 N/A GO:0009765 ... N/A 38442179
    886780 8wey:2 (1.92) BS03 CLA N/A GO:0009765 ... N/A 38442179
    886781 8wey:2 (1.92) BS04 CLA N/A GO:0009765 ... N/A 38442179
    886782 8wey:2 (1.92) BS05 CLA N/A GO:0009765 ... N/A 38442179
    886783 8wey:2 (1.92) BS06 CLA N/A GO:0009765 ... N/A 38442179
    886784 8wey:2 (1.92) BS07 CLA N/A GO:0009765 ... N/A 38442179
    886785 8wey:2 (1.92) BS08 CLA N/A GO:0009765 ... N/A 38442179
    886786 8wey:2 (1.92) BS09 CLA N/A GO:0009765 ... N/A 38442179
    886787 8wey:2 (1.92) BS10 CLA N/A GO:0009765 ... N/A 38442179
    886788 8wey:2 (1.92) BS11 CLA N/A GO:0009765 ... N/A 38442179
    886789 8wey:2 (1.92) BS12 CLA N/A GO:0009765 ... N/A 38442179
    886790 8wey:2 (1.92) BS13 CLA N/A GO:0009765 ... N/A 38442179
    886791 8wey:2 (1.92) BS14 CLA N/A GO:0009765 ... N/A 38442179
    886792 8wey:2 (1.92) BS15 5X6 N/A GO:0009765 ... N/A 38442179
    886793 8wey:2 (1.92) BS16 5X6 N/A GO:0009765 ... N/A 38442179
    886794 8wey:2 (1.92) BS17 5X6 N/A GO:0009765 ... N/A 38442179
    886795 8wey:2 (1.92) BS18 5X6 N/A GO:0009765 ... N/A 38442179
    886796 8wey:2 (1.92) BS19 5X6 N/A GO:0009765 ... N/A 38442179
    886797 8wey:3 (1.92) BS01 CLA N/A GO:0009765 ... N/A 38442179
    886798 8wey:3 (1.92) BS02 CLA N/A GO:0009765 ... N/A 38442179
    886799 8wey:3 (1.92) BS03 CLA N/A GO:0009765 ... N/A 38442179
    886800 8wey:3 (1.92) BS04 CLA N/A GO:0009765 ... N/A 38442179
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218