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BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    885001 8wa1:C (2.8) BS03 MG 2.7.7.6 GO:0000287 ... A0A140G1Q3 38428393
    885002 8wa1:G (2.8) BS01 FE 1.15.1.1 GO:0004784 ... A0A1S4CKK0 38428393
    885003 8wa1:L (2.8) BS01 FE 1.15.1.1 GO:0004784 ... A0A1S4CIZ9 38428393
    885004 8wa1:c (2.8) BS01 dna 2.7.7.6 GO:0000428 ... P38550 38428393
    885005 8wa2:A (3.0) BS01 FUB ? N/A A8J9H7 38552612
    885006 8wa2:A (3.0) BS02 FUB ? N/A A8J9H7 38552612
    885007 8wa2:A (3.0) BS03 FUB ? N/A A8J9H7 38552612
    885008 8wa2:A (3.0) BS04 GZL ? N/A A8J9H7 38552612
    885009 8wa2:A (3.0) BS05 FUB ? N/A A8J9H7 38552612
    885010 8wa2:A (3.0) BS06 FUB ? N/A A8J9H7 38552612
    885011 8wa2:A (3.0) BS07 GZL ? N/A A8J9H7 38552612
    885012 8wa2:A (3.0) BS08 FUB ? N/A A8J9H7 38552612
    885013 8wa2:A (3.0) BS09 FUB ? N/A A8J9H7 38552612
    885014 8wa2:A (3.0) BS10 FUB ? N/A A8J9H7 38552612
    885015 8wa2:A (3.0) BS11 FUB ? N/A A8J9H7 38552612
    885016 8wa2:A (3.0) BS12 FUB ? N/A A8J9H7 38552612
    885017 8wa2:A (3.0) BS13 FUB ? N/A A8J9H7 38552612
    885018 8wa2:A (3.0) BS14 FUB ? N/A A8J9H7 38552612
    885019 8wa2:A (3.0) BS15 FUB ? N/A A8J9H7 38552612
    885020 8wa2:A (3.0) BS16 FUB ? N/A A8J9H7 38552612
    885021 8wa2:A (3.0) BS17 FUB ? N/A A8J9H7 38552612
    885022 8wa2:A (3.0) BS18 FUB ? N/A A8J9H7 38552612
    885023 8wa2:A (3.0) BS19 FUB ? N/A A8J9H7 38552612
    885024 8wa2:A (3.0) BS20 FUB ? N/A A8J9H7 38552612
    885025 8wa2:A (3.0) BS21 FUB ? N/A A8J9H7 38552612
    885026 8wa2:A (3.0) BS22 FUB ? N/A A8J9H7 38552612
    885027 8wa2:A (3.0) BS23 FUB ? N/A A8J9H7 38552612
    885028 8wa2:A (3.0) BS24 BMA ? N/A A8J9H7 38552612
    885029 8wa2:A (3.0) BS25 MAN ? N/A A8J9H7 38552612
    885030 8wa2:A (3.0) BS26 FUB ? N/A A8J9H7 38552612
    885031 8wa2:A (3.0) BS27 GZL ? N/A A8J9H7 38552612
    885032 8wa2:A (3.0) BS28 AHR ? N/A A8J9H7 38552612
    885033 8wa2:A (3.0) BS29 AHR ? N/A A8J9H7 38552612
    885034 8wa2:A (3.0) BS30 AHR ? N/A A8J9H7 38552612
    885035 8wa2:A (3.0) BS31 CA ? N/A A8J9H7 38552612
    885036 8wa2:A (3.0) BS32 GLA ? N/A A8J9H7 38552612
    885037 8wa2:A (3.0) BS33 GLA ? N/A A8J9H7 38552612
    885038 8wa2:A (3.0) BS34 GLA ? N/A A8J9H7 38552612
    885039 8wa2:A (3.0) BS35 GLA ? N/A A8J9H7 38552612
    885040 8wa2:A (3.0) BS36 GLA ? N/A A8J9H7 38552612
    885041 8wa2:A (3.0) BS37 GLA ? N/A A8J9H7 38552612
    885042 8wa2:A (3.0) BS38 GLA ? N/A A8J9H7 38552612
    885043 8wa2:A (3.0) BS39 GLA ? N/A A8J9H7 38552612
    885044 8wa2:A (3.0) BS40 GLA ? N/A A8J9H7 38552612
    885045 8wa2:A (3.0) BS41 GLA ? N/A A8J9H7 38552612
    885046 8wa2:A (3.0) BS42 GLA ? N/A A8J9H7 38552612
    885047 8wa2:B (3.0) BS01 FUB ? N/A A8J9H7 38552612
    885048 8wa2:B (3.0) BS02 FUB ? N/A A8J9H7 38552612
    885049 8wa2:B (3.0) BS03 FUB ? N/A A8J9H7 38552612
    885050 8wa2:B (3.0) BS04 FUB ? N/A A8J9H7 38552612
    885051 8wa2:B (3.0) BS05 AHR ? N/A A8J9H7 38552612
    885052 8wa2:B (3.0) BS06 FUB ? N/A A8J9H7 38552612
    885053 8wa2:B (3.0) BS07 FUB ? N/A A8J9H7 38552612
    885054 8wa2:B (3.0) BS08 FUB ? N/A A8J9H7 38552612
    885055 8wa2:B (3.0) BS09 FUB ? N/A A8J9H7 38552612
    885056 8wa2:B (3.0) BS10 FUB ? N/A A8J9H7 38552612
    885057 8wa2:B (3.0) BS11 FUB ? N/A A8J9H7 38552612
    885058 8wa2:B (3.0) BS12 FUB ? N/A A8J9H7 38552612
    885059 8wa2:B (3.0) BS13 FUB ? N/A A8J9H7 38552612
    885060 8wa2:B (3.0) BS14 FUB ? N/A A8J9H7 38552612
    885061 8wa2:B (3.0) BS15 FUB ? N/A A8J9H7 38552612
    885062 8wa2:B (3.0) BS16 FUB ? N/A A8J9H7 38552612
    885063 8wa2:B (3.0) BS17 FUB ? N/A A8J9H7 38552612
    885064 8wa2:B (3.0) BS18 FUB ? N/A A8J9H7 38552612
    885065 8wa2:B (3.0) BS19 FUB ? N/A A8J9H7 38552612
    885066 8wa2:B (3.0) BS20 FUB ? N/A A8J9H7 38552612
    885067 8wa2:B (3.0) BS21 FUB ? N/A A8J9H7 38552612
    885068 8wa2:B (3.0) BS22 FUB ? N/A A8J9H7 38552612
    885069 8wa2:B (3.0) BS23 FUB ? N/A A8J9H7 38552612
    885070 8wa2:B (3.0) BS24 FUB ? N/A A8J9H7 38552612
    885071 8wa2:B (3.0) BS25 FUB ? N/A A8J9H7 38552612
    885072 8wa2:B (3.0) BS26 FUB ? N/A A8J9H7 38552612
    885073 8wa2:B (3.0) BS27 FUB ? N/A A8J9H7 38552612
    885074 8wa2:B (3.0) BS28 FUB ? N/A A8J9H7 38552612
    885075 8wa2:B (3.0) BS29 FUB ? N/A A8J9H7 38552612
    885076 8wa2:B (3.0) BS30 BMA ? N/A A8J9H7 38552612
    885077 8wa2:B (3.0) BS31 MAN ? N/A A8J9H7 38552612
    885078 8wa2:B (3.0) BS32 FUB ? N/A A8J9H7 38552612
    885079 8wa2:B (3.0) BS33 FUB ? N/A A8J9H7 38552612
    885080 8wa2:B (3.0) BS34 AHR ? N/A A8J9H7 38552612
    885081 8wa2:B (3.0) BS35 GZL ? N/A A8J9H7 38552612
    885082 8wa2:B (3.0) BS36 FUB ? N/A A8J9H7 38552612
    885083 8wa2:B (3.0) BS37 FUB ? N/A A8J9H7 38552612
    885084 8wa2:B (3.0) BS38 AHR ? N/A A8J9H7 38552612
    885085 8wa2:B (3.0) BS39 AHR ? N/A A8J9H7 38552612
    885086 8wa2:B (3.0) BS40 CA ? N/A A8J9H7 38552612
    885087 8wa2:B (3.0) BS41 GLA ? N/A A8J9H7 38552612
    885088 8wa2:B (3.0) BS42 GLA ? N/A A8J9H7 38552612
    885089 8wa2:B (3.0) BS43 GLA ? N/A A8J9H7 38552612
    885090 8wa2:B (3.0) BS44 GLA ? N/A A8J9H7 38552612
    885091 8wa2:B (3.0) BS45 GLA ? N/A A8J9H7 38552612
    885092 8wa2:B (3.0) BS46 GLA ? N/A A8J9H7 38552612
    885093 8wa2:B (3.0) BS47 GLA ? N/A A8J9H7 38552612
    885094 8wa2:B (3.0) BS48 GLA ? N/A A8J9H7 38552612
    885095 8wa2:B (3.0) BS49 GLA ? N/A A8J9H7 38552612
    885096 8wa2:B (3.0) BS50 GLA ? N/A A8J9H7 38552612
    885097 8wa2:B (3.0) BS51 GLA ? N/A A8J9H7 38552612
    885098 8wa2:C (3.0) BS01 FUB ? N/A A8J9H7 38552612
    885099 8wa2:C (3.0) BS02 FUB ? N/A A8J9H7 38552612
    885100 8wa2:C (3.0) BS03 GZL ? N/A A8J9H7 38552612
    885101 8wa2:C (3.0) BS04 FUB ? N/A A8J9H7 38552612
    885102 8wa2:C (3.0) BS05 GZL ? N/A A8J9H7 38552612
    885103 8wa2:C (3.0) BS06 FUB ? N/A A8J9H7 38552612
    885104 8wa2:C (3.0) BS07 FUB ? N/A A8J9H7 38552612
    885105 8wa2:C (3.0) BS08 FUB ? N/A A8J9H7 38552612
    885106 8wa2:C (3.0) BS09 AHR ? N/A A8J9H7 38552612
    885107 8wa2:C (3.0) BS10 FUB ? N/A A8J9H7 38552612
    885108 8wa2:C (3.0) BS11 FUB ? N/A A8J9H7 38552612
    885109 8wa2:C (3.0) BS12 FUB ? N/A A8J9H7 38552612
    885110 8wa2:C (3.0) BS13 FUB ? N/A A8J9H7 38552612
    885111 8wa2:C (3.0) BS14 FUB ? N/A A8J9H7 38552612
    885112 8wa2:C (3.0) BS15 GZL ? N/A A8J9H7 38552612
    885113 8wa2:C (3.0) BS16 FUB ? N/A A8J9H7 38552612
    885114 8wa2:C (3.0) BS17 AHR ? N/A A8J9H7 38552612
    885115 8wa2:C (3.0) BS18 CA ? N/A A8J9H7 38552612
    885116 8wa2:C (3.0) BS19 GLA ? N/A A8J9H7 38552612
    885117 8wa2:C (3.0) BS20 GLA ? N/A A8J9H7 38552612
    885118 8wa2:C (3.0) BS21 GLA ? N/A A8J9H7 38552612
    885119 8wa2:D (3.0) BS01 FUB ? N/A A8J9H7 38552612
    885120 8wa2:D (3.0) BS02 FUB ? N/A A8J9H7 38552612
    885121 8wa2:D (3.0) BS03 GZL ? N/A A8J9H7 38552612
    885122 8wa2:D (3.0) BS04 FUB ? N/A A8J9H7 38552612
    885123 8wa2:D (3.0) BS05 FUB ? N/A A8J9H7 38552612
    885124 8wa2:D (3.0) BS06 FUB ? N/A A8J9H7 38552612
    885125 8wa2:D (3.0) BS07 FUB ? N/A A8J9H7 38552612
    885126 8wa2:D (3.0) BS08 FUB ? N/A A8J9H7 38552612
    885127 8wa2:D (3.0) BS09 FUB ? N/A A8J9H7 38552612
    885128 8wa2:D (3.0) BS10 FUB ? N/A A8J9H7 38552612
    885129 8wa2:D (3.0) BS11 FUB ? N/A A8J9H7 38552612
    885130 8wa2:D (3.0) BS12 FUB ? N/A A8J9H7 38552612
    885131 8wa2:D (3.0) BS13 FUB ? N/A A8J9H7 38552612
    885132 8wa2:D (3.0) BS14 FUB ? N/A A8J9H7 38552612
    885133 8wa2:D (3.0) BS15 FUB ? N/A A8J9H7 38552612
    885134 8wa2:D (3.0) BS16 FUB ? N/A A8J9H7 38552612
    885135 8wa2:D (3.0) BS17 AHR ? N/A A8J9H7 38552612
    885136 8wa2:D (3.0) BS18 FUB ? N/A A8J9H7 38552612
    885137 8wa2:D (3.0) BS19 FUB ? N/A A8J9H7 38552612
    885138 8wa2:D (3.0) BS20 GZL ? N/A A8J9H7 38552612
    885139 8wa2:D (3.0) BS21 FUB ? N/A A8J9H7 38552612
    885140 8wa2:D (3.0) BS22 FUB ? N/A A8J9H7 38552612
    885141 8wa2:D (3.0) BS23 FUB ? N/A A8J9H7 38552612
    885142 8wa2:D (3.0) BS24 AHR ? N/A A8J9H7 38552612
    885143 8wa2:D (3.0) BS25 CA ? N/A A8J9H7 38552612
    885144 8wa2:D (3.0) BS26 GLA ? N/A A8J9H7 38552612
    885145 8wa2:D (3.0) BS27 GLA ? N/A A8J9H7 38552612
    885146 8wa2:D (3.0) BS28 GLA ? N/A A8J9H7 38552612
    885147 8wa2:E (3.0) BS01 FUB ? N/A A8J9H7 38552612
    885148 8wa2:E (3.0) BS02 FUB ? N/A A8J9H7 38552612
    885149 8wa2:E (3.0) BS03 FUB ? N/A A8J9H7 38552612
    885150 8wa2:E (3.0) BS04 FUB ? N/A A8J9H7 38552612
    885151 8wa2:E (3.0) BS05 FUB ? N/A A8J9H7 38552612
    885152 8wa2:E (3.0) BS06 FUB ? N/A A8J9H7 38552612
    885153 8wa2:E (3.0) BS07 FUB ? N/A A8J9H7 38552612
    885154 8wa2:E (3.0) BS08 FUB ? N/A A8J9H7 38552612
    885155 8wa2:E (3.0) BS09 FUB ? N/A A8J9H7 38552612
    885156 8wa2:E (3.0) BS10 FUB ? N/A A8J9H7 38552612
    885157 8wa2:E (3.0) BS11 FUB ? N/A A8J9H7 38552612
    885158 8wa2:E (3.0) BS12 FUB ? N/A A8J9H7 38552612
    885159 8wa2:E (3.0) BS13 FUB ? N/A A8J9H7 38552612
    885160 8wa2:E (3.0) BS14 GZL ? N/A A8J9H7 38552612
    885161 8wa2:E (3.0) BS15 FUB ? N/A A8J9H7 38552612
    885162 8wa2:E (3.0) BS16 FUB ? N/A A8J9H7 38552612
    885163 8wa2:E (3.0) BS17 FUB ? N/A A8J9H7 38552612
    885164 8wa2:E (3.0) BS18 FUB ? N/A A8J9H7 38552612
    885165 8wa2:E (3.0) BS19 AHR ? N/A A8J9H7 38552612
    885166 8wa2:E (3.0) BS20 FUB ? N/A A8J9H7 38552612
    885167 8wa2:E (3.0) BS21 FUB ? N/A A8J9H7 38552612
    885168 8wa2:E (3.0) BS22 GZL ? N/A A8J9H7 38552612
    885169 8wa2:E (3.0) BS23 FUB ? N/A A8J9H7 38552612
    885170 8wa2:E (3.0) BS24 GZL ? N/A A8J9H7 38552612
    885171 8wa2:E (3.0) BS25 FUB ? N/A A8J9H7 38552612
    885172 8wa2:E (3.0) BS26 GZL ? N/A A8J9H7 38552612
    885173 8wa2:E (3.0) BS27 AHR ? N/A A8J9H7 38552612
    885174 8wa2:E (3.0) BS28 FUB ? N/A A8J9H7 38552612
    885175 8wa2:E (3.0) BS29 BMA ? N/A A8J9H7 38552612
    885176 8wa2:E (3.0) BS30 MAN ? N/A A8J9H7 38552612
    885177 8wa2:E (3.0) BS31 AHR ? N/A A8J9H7 38552612
    885178 8wa2:E (3.0) BS32 CA ? N/A A8J9H7 38552612
    885179 8wa2:E (3.0) BS33 GLA ? N/A A8J9H7 38552612
    885180 8wa2:E (3.0) BS34 GLA ? N/A A8J9H7 38552612
    885181 8wa2:E (3.0) BS35 GLA ? N/A A8J9H7 38552612
    885182 8wa2:E (3.0) BS36 GLA ? N/A A8J9H7 38552612
    885183 8wa2:E (3.0) BS37 GLA ? N/A A8J9H7 38552612
    885184 8wa2:E (3.0) BS38 GLA ? N/A A8J9H7 38552612
    885185 8wa2:E (3.0) BS39 GLA ? N/A A8J9H7 38552612
    885186 8wa2:E (3.0) BS40 GLA ? N/A A8J9H7 38552612
    885187 8wa2:E (3.0) BS41 GLA ? N/A A8J9H7 38552612
    885188 8wa2:F (3.0) BS01 FUB ? N/A A8J9H7 38552612
    885189 8wa2:F (3.0) BS02 FUB ? N/A A8J9H7 38552612
    885190 8wa2:F (3.0) BS03 FUB ? N/A A8J9H7 38552612
    885191 8wa2:F (3.0) BS04 FUB ? N/A A8J9H7 38552612
    885192 8wa2:F (3.0) BS05 FUB ? N/A A8J9H7 38552612
    885193 8wa2:F (3.0) BS06 FUB ? N/A A8J9H7 38552612
    885194 8wa2:F (3.0) BS07 FUB ? N/A A8J9H7 38552612
    885195 8wa2:F (3.0) BS08 FUB ? N/A A8J9H7 38552612
    885196 8wa2:F (3.0) BS09 FUB ? N/A A8J9H7 38552612
    885197 8wa2:F (3.0) BS10 FUB ? N/A A8J9H7 38552612
    885198 8wa2:F (3.0) BS11 FUB ? N/A A8J9H7 38552612
    885199 8wa2:F (3.0) BS12 FUB ? N/A A8J9H7 38552612
    885200 8wa2:F (3.0) BS13 FUB ? N/A A8J9H7 38552612
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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