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BioLiP
Download all results in tab-seperated text for 37 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8eaq:A (3.26) BS01 ZN ? GO:0000902 ... P29994 36376291
    2 8eaq:A (3.26) BS02 CA ? GO:0000902 ... P29994 36376291
    3 8eaq:A (3.26) BS03 PLX ? GO:0000902 ... P29994 36376291
    4 8eaq:A (3.26) BS04 PLX ? GO:0000902 ... P29994 36376291
    5 8eaq:A (3.26) BS05 PLX ? GO:0000902 ... P29994 36376291
    6 8eaq:A (3.26) BS06 PLX ? GO:0000902 ... P29994 36376291
    7 8eaq:A (3.26) BS07 PLX ? GO:0000902 ... P29994 36376291
    8 8eaq:A (3.26) BS08 PLX ? GO:0000902 ... P29994 36376291
    9 8eaq:A (3.26) BS09 PLX ? GO:0000902 ... P29994 36376291
    10 8eaq:B (3.26) BS01 PLX ? GO:0000902 ... P29994 36376291
    11 8eaq:B (3.26) BS02 PLX ? GO:0000902 ... P29994 36376291
    12 8eaq:B (3.26) BS03 ZN ? GO:0000902 ... P29994 36376291
    13 8eaq:B (3.26) BS04 CA ? GO:0000902 ... P29994 36376291
    14 8eaq:B (3.26) BS05 PLX ? GO:0000902 ... P29994 36376291
    15 8eaq:B (3.26) BS06 PLX ? GO:0000902 ... P29994 36376291
    16 8eaq:B (3.26) BS07 PLX ? GO:0000902 ... P29994 36376291
    17 8eaq:B (3.26) BS08 PLX ? GO:0000902 ... P29994 36376291
    18 8eaq:B (3.26) BS09 PLX ? GO:0000902 ... P29994 36376291
    19 8eaq:C (3.26) BS01 PLX ? GO:0000902 ... P29994 36376291
    20 8eaq:C (3.26) BS02 ZN ? GO:0000902 ... P29994 36376291
    21 8eaq:C (3.26) BS03 CA ? GO:0000902 ... P29994 36376291
    22 8eaq:C (3.26) BS04 PLX ? GO:0000902 ... P29994 36376291
    23 8eaq:C (3.26) BS05 PLX ? GO:0000902 ... P29994 36376291
    24 8eaq:C (3.26) BS06 PLX ? GO:0000902 ... P29994 36376291
    25 8eaq:C (3.26) BS07 PLX ? GO:0000902 ... P29994 36376291
    26 8eaq:C (3.26) BS08 PLX ? GO:0000902 ... P29994 36376291
    27 8eaq:C (3.26) BS09 PLX ? GO:0000902 ... P29994 36376291
    28 8eaq:D (3.26) BS01 PLX ? GO:0000902 ... P29994 36376291
    29 8eaq:D (3.26) BS02 PLX ? GO:0000902 ... P29994 36376291
    30 8eaq:D (3.26) BS03 PLX ? GO:0000902 ... P29994 36376291
    31 8eaq:D (3.26) BS04 ZN ? GO:0000902 ... P29994 36376291
    32 8eaq:D (3.26) BS05 CA ? GO:0000902 ... P29994 36376291
    33 8eaq:D (3.26) BS06 PLX ? GO:0000902 ... P29994 36376291
    34 8eaq:D (3.26) BS07 PLX ? GO:0000902 ... P29994 36376291
    35 8eaq:D (3.26) BS08 PLX ? GO:0000902 ... P29994 36376291
    36 8eaq:D (3.26) BS09 PLX ? GO:0000902 ... P29994 36376291
    37 8eaq:D (3.26) BS10 PLX ? GO:0000902 ... P29994 36376291
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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