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BioLiP
Download all results in tab-seperated text for 60 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8akq:0 (4.1) BS01 ADP ? N/A P74717 39152237
    2 8akq:1 (4.1) BS01 ADP ? N/A P74717 39152237
    3 8akq:2 (4.1) BS01 ADP ? N/A P74717 39152237
    4 8akq:3 (4.1) BS01 ADP ? N/A P74717 39152237
    5 8akq:4 (4.1) BS01 ADP ? N/A P74717 39152237
    6 8akq:5 (4.1) BS01 ADP ? N/A P74717 39152237
    7 8akq:6 (4.1) BS01 ADP ? N/A P74717 39152237
    8 8akq:7 (4.1) BS01 ADP ? N/A P74717 39152237
    9 8akq:A (4.1) BS01 ADP ? N/A P74717 39152237
    10 8akq:B (4.1) BS01 ADP ? N/A P74717 39152237
    11 8akq:C (4.1) BS01 ADP ? N/A P74717 39152237
    12 8akq:D (4.1) BS01 ADP ? N/A P74717 39152237
    13 8akq:E (4.1) BS01 ADP ? N/A P74717 39152237
    14 8akq:F (4.1) BS01 ADP ? N/A P74717 39152237
    15 8akq:G (4.1) BS01 ADP ? N/A P74717 39152237
    16 8akq:H (4.1) BS01 ADP ? N/A P74717 39152237
    17 8akq:I (4.1) BS01 ADP ? N/A P74717 39152237
    18 8akq:J (4.1) BS01 ADP ? N/A P74717 39152237
    19 8akq:K (4.1) BS01 ADP ? N/A P74717 39152237
    20 8akq:L (4.1) BS01 ADP ? N/A P74717 39152237
    21 8akq:M (4.1) BS01 ADP ? N/A P74717 39152237
    22 8akq:N (4.1) BS01 ADP ? N/A P74717 39152237
    23 8akq:O (4.1) BS01 ADP ? N/A P74717 39152237
    24 8akq:P (4.1) BS01 ADP ? N/A P74717 39152237
    25 8akq:Q (4.1) BS01 ADP ? N/A P74717 39152237
    26 8akq:R (4.1) BS01 ADP ? N/A P74717 39152237
    27 8akq:S (4.1) BS01 ADP ? N/A P74717 39152237
    28 8akq:T (4.1) BS01 ADP ? N/A P74717 39152237
    29 8akq:U (4.1) BS01 ADP ? N/A P74717 39152237
    30 8akq:V (4.1) BS01 ADP ? N/A P74717 39152237
    31 8akq:W (4.1) BS01 ADP ? N/A P74717 39152237
    32 8akq:X (4.1) BS01 ADP ? N/A P74717 39152237
    33 8akq:Y (4.1) BS01 ADP ? N/A P74717 39152237
    34 8akq:Z (4.1) BS01 ADP ? N/A P74717 39152237
    35 8akq:a (4.1) BS01 ADP ? N/A P74717 39152237
    36 8akq:b (4.1) BS01 ADP ? N/A P74717 39152237
    37 8akq:c (4.1) BS01 ADP ? N/A P74717 39152237
    38 8akq:d (4.1) BS01 ADP ? N/A P74717 39152237
    39 8akq:e (4.1) BS01 ADP ? N/A P74717 39152237
    40 8akq:f (4.1) BS01 ADP ? N/A P74717 39152237
    41 8akq:g (4.1) BS01 ADP ? N/A P74717 39152237
    42 8akq:h (4.1) BS01 ADP ? N/A P74717 39152237
    43 8akq:i (4.1) BS01 ADP ? N/A P74717 39152237
    44 8akq:j (4.1) BS01 ADP ? N/A P74717 39152237
    45 8akq:k (4.1) BS01 ADP ? N/A P74717 39152237
    46 8akq:l (4.1) BS01 ADP ? N/A P74717 39152237
    47 8akq:m (4.1) BS01 ADP ? N/A P74717 39152237
    48 8akq:n (4.1) BS01 ADP ? N/A P74717 39152237
    49 8akq:o (4.1) BS01 ADP ? N/A P74717 39152237
    50 8akq:p (4.1) BS01 ADP ? N/A P74717 39152237
    51 8akq:q (4.1) BS01 ADP ? N/A P74717 39152237
    52 8akq:r (4.1) BS01 ADP ? N/A P74717 39152237
    53 8akq:s (4.1) BS01 ADP ? N/A P74717 39152237
    54 8akq:t (4.1) BS01 ADP ? N/A P74717 39152237
    55 8akq:u (4.1) BS01 ADP ? N/A P74717 39152237
    56 8akq:v (4.1) BS01 ADP ? N/A P74717 39152237
    57 8akq:w (4.1) BS01 ADP ? N/A P74717 39152237
    58 8akq:x (4.1) BS01 ADP ? N/A P74717 39152237
    59 8akq:y (4.1) BS01 ADP ? N/A P74717 39152237
    60 8akq:z (4.1) BS01 ADP ? N/A P74717 39152237
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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