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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    174001 8bgo:H (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    174002 8bgo:I (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    174003 8bgo:J (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    174004 8bgo:K (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    174005 8bgo:L (3.08) BS01 ZN 3.5.1.136 GO:0016811 ... A0A160VQZ8 36555375
    174006 8bgp:A (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    174007 8bgp:B (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    174008 8bgp:C (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    174009 8bgp:D (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    174010 8bgp:E (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    174011 8bgp:F (2.51) BS01 ZN ? GO:0016811 ... A0A160VQZ8 36555375
    174012 8bgw:A (2.2) BS03 FE N/A GO:0004129 ... N/A 37296134
    174013 8bgw:A (2.2) BS04 CA N/A GO:0004129 ... N/A 37296134
    174014 8bgw:B (2.2) BS08 FE N/A GO:0004129 ... N/A 37296134
    174015 8bgw:B (2.2) BS09 CA N/A GO:0004129 ... N/A 37296134
    174016 8bhf:M3 (3.1) BS02 MG ? GO:0003735 ... G1TRM4 37653241
    174017 8bhf:T1 (3.1) BS02 ZN ? GO:0003735 ... G1TXG5 37653241
    174018 8bhf:T1 (3.1) BS03 MG ? GO:0003735 ... G1TXG5 37653241
    174019 8bhf:W1 (3.1) BS03 ZN ? GO:0003735 ... U3KPD5 37653241
    174020 8bhf:Z1 (3.1) BS02 ZN N/A GO:0003735 ... N/A 37653241
    174021 8bhf:b1 (3.1) BS02 ZN ? GO:0003735 ... G1T040 37653241
    174022 8bhf:b3 (3.1) BS02 ZN N/A GO:0003735 ... N/A 37653241
    174023 8bhf:c1 (3.1) BS02 ZN ? GO:0003735 ... G1SY53 37653241
    174024 8bhf:e3 (3.1) BS02 ZN ? GO:0003735 ... G1U7M4 37653241
    174025 8bhf:j3 (3.1) BS03 MG N/A GO:0003735 ... N/A 37653241
    174026 8bhh:A (1.69) BS01 CA 3.1.1.-
    3.1.1.73
    GO:0030600 ... A0A2H3G048 36961270
    174027 8bhh:B (1.69) BS03 CA 3.1.1.-
    3.1.1.73
    GO:0030600 ... A0A2H3G048 36961270
    174028 8bhx:A (1.25) BS01 FE 1.15.1.1 GO:0004784 ... Q47RC2 37725277
    174029 8bhx:B (1.25) BS01 FE 1.15.1.1 GO:0004784 ... Q47RC2 37725277
    174030 8bi0:A (3.2) BS04 MG 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    174031 8bi0:B (3.2) BS05 MG 7.6.2.2 GO:0005515 ... Q9UNQ0 36580587
    174032 8bi5:A (2.5) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    174033 8bi5:B (2.5) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    174034 8bi6:A (2.4) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    174035 8bi6:B (2.4) BS01 MG 2.7.1.32
    2.7.1.82
    GO:0004103 ... P35790 N/A
    174036 8bi7:A (1.4) BS02 MG ? GO:0000122 ... P31947 36926879
    174037 8big:G (2.8) BS02 MG ? GO:0008168 ... Q7MY04 36963398
    174038 8bip:LA (3.1) BS02 MG ? GO:0002181 ... P0CX45 37079644
    174039 8bip:Le (3.1) BS02 MG ? GO:0002181 ... P38061 37079644
    174040 8bip:Lg (3.1) BS02 ZN ? GO:0002181 ... P87262 37079644
    174041 8bip:Lj (3.1) BS03 ZN ? GO:0000448 ... P49166 37079644
    174042 8bip:Lm (3.1) BS02 ZN ? GO:0003735 ... P0CH08 37079644
    174043 8bip:Lo (3.1) BS02 ZN ? GO:0002181 ... P0CX27 37079644
    174044 8bip:Lp (3.1) BS02 ZN ? GO:0002181 ... P0CX25 37079644
    174045 8bj9:A (2.069) BS01 FE N/A GO:0006826 ... N/A 37428843
    174046 8bja:A (3.0) BS01 ZN 2.3.2.26 GO:0000209 ... O95071 37409633
    174047 8bja:A (3.0) BS02 ZN 2.3.2.26 GO:0000209 ... O95071 37409633
    174048 8bja:A (3.0) BS03 ZN 2.3.2.26 GO:0000209 ... O95071 37409633
    174049 8bja:B (3.0) BS01 ZN 2.3.2.26 GO:0000209 ... O95071 37409633
    174050 8bja:B (3.0) BS02 ZN 2.3.2.26 GO:0000209 ... O95071 37409633
    174051 8bja:B (3.0) BS03 ZN 2.3.2.26 GO:0000209 ... O95071 37409633
    174052 8bjg:A (1.4) BS02 MG ? GO:0000122 ... P31947 36926879
    174053 8bjg:A (1.4) BS03 MG ? GO:0000122 ... P31947 36926879
    174054 8bjk:A (1.35) BS01 ZN ? N/A F8W4B7 37392419
    174055 8bjn:A (1.4) BS02 MG ? GO:0000122 ... P31947 36926879
    174056 8bjp:AAA (2.1) BS01 MG N/A N/A N/A N/A
    174057 8bjq:LA (3.8) BS02 MG ? GO:0002181 ... P0CX45 37079644
    174058 8bjq:Le (3.8) BS02 MG ? GO:0002181 ... P38061 37079644
    174059 8bjq:Lg (3.8) BS02 ZN ? GO:0002181 ... P87262 37079644
    174060 8bjq:Lj (3.8) BS03 ZN ? GO:0000448 ... P49166 37079644
    174061 8bjq:Lm (3.8) BS02 ZN ? GO:0003735 ... P0CH08 37079644
    174062 8bjq:Lo (3.8) BS02 ZN ? GO:0002181 ... P0CX27 37079644
    174063 8bjq:Lp (3.8) BS02 ZN ? GO:0002181 ... P0CX25 37079644
    174064 8bjt:A (2.188) BS02 ZN 2.7.11.21 GO:0004672 ... P53350 37197456
    174065 8bjx:AAA (1.283) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    174066 8bjz:B (1.89) BS01 ZN N/A N/A N/A N/A
    174067 8bl0:A (1.82) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    174068 8bl0:B (1.82) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    174069 8bl1:A (2.06) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    174070 8bl1:B (2.06) BS02 ZN 2.3.1.-
    2.3.1.286
    2.4.2.-
    GO:0070403 ... Q8N6T7 N/A
    174071 8blj:A (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    174072 8blj:B (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    174073 8blj:B (2.18) BS02 CA ? GO:0015276 ... Q9ULK0 38060673
    174074 8blj:C (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    174075 8blj:C (2.18) BS02 CA ? GO:0015276 ... Q9ULK0 38060673
    174076 8blj:D (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    174077 8blj:E (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    174078 8blj:F (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    174079 8blj:F (2.18) BS02 CA ? GO:0015276 ... Q9ULK0 38060673
    174080 8bly:H (3.2) BS01 MG 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    174081 8bly:I (3.2) BS01 MG 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    174082 8bly:N (3.2) BS01 MG 5.6.1.7 GO:0000287 ... P0A6F5 37592181
    174083 8bms:A (2.6) BS02 MG 7.-.-.- GO:0005524 ... Q1GBJ0 37491368
    174084 8bms:B (2.6) BS03 MG 3.6.3.- GO:0005524 ... Q1GBI9 37491368
    174085 8bn1:A (2.61) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37433017
    174086 8bn1:B (2.61) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 37433017
    174087 8bn2:A (1.63) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    174088 8bn2:B (1.63) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    174089 8bn3:D6 (2.4) BS02 ZN ? GO:0003735 ... N/A 38324474
    174090 8bn3:D9 (2.4) BS02 ZN ? GO:0003735 ... N/A 38324474
    174091 8bn3:O4 (2.4) BS02 ZN ? GO:0002181 ... P87262 38324474
    174092 8bn3:O7 (2.4) BS03 ZN ? GO:0000448 ... P49166 38324474
    174093 8bn3:Q0 (2.4) BS02 ZN ? GO:0003735 ... P0CH08 38324474
    174094 8bn3:Q2 (2.4) BS02 ZN ? GO:0002181 ... P0CX27 38324474
    174095 8bn3:Q3 (2.4) BS02 ZN ? GO:0002181 ... P0CX25 38324474
    174096 8bn5:A (1.9) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    174097 8bn5:B (1.9) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    174098 8bn6:A (1.6) BS01 CA 5.6.2.2 GO:0003677 ... Q9I7C2 36877255
    174099 8bnv:A (2.86) BS01 MG ? GO:0000723 ... D3PAZ1 36838444
    174100 8bo1:B (2.501) BS02 MN 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    174101 8bo1:B (2.501) BS03 MG 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    174102 8bo1:B (2.501) BS04 MN 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    174103 8bo1:B (2.501) BS05 MG 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    174104 8bo1:D (2.501) BS02 MN 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    174105 8bo1:D (2.501) BS03 MG 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    174106 8bo1:D (2.501) BS04 MN 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    174107 8bo1:D (2.501) BS05 MG 4.6.1.1 GO:0005576 ... A0A9P1NJI6 37747912
    174108 8bo8:A (1.55) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 N/A
    174109 8bo8:A (1.55) BS03 ZN 3.4.17.21 GO:0004180 ... Q04609 N/A
    174110 8bo8:A (1.55) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 N/A
    174111 8boe:AAA (1.55) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 36626645
    174112 8bol:A (1.55) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 N/A
    174113 8bol:A (1.55) BS03 ZN 3.4.17.21 GO:0004180 ... Q04609 N/A
    174114 8bol:A (1.55) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 N/A
    174115 8bos:R (2.1) BS03 MG 3.6.5.2 GO:0003924 ... P01112 N/A
    174116 8bow:A (1.58) BS02 ZN 3.4.17.21 GO:0004180 ... Q04609 N/A
    174117 8bow:A (1.58) BS03 ZN 3.4.17.21 GO:0004180 ... Q04609 N/A
    174118 8bow:A (1.58) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 N/A
    174119 8boz:A (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    174120 8boz:C (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    174121 8boz:E (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    174122 8boz:G (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    174123 8boz:I (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    174124 8boz:K (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    174125 8boz:M (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    174126 8boz:O (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    174127 8bp1:A (1.72) BS01 MG N/A GO:0016787 ... N/A 38438341
    174128 8bp1:A (1.72) BS02 MG N/A GO:0016787 ... N/A 38438341
    174129 8bp2:BBB (2.8) BS04 MN 5.6.2.2 GO:0003677 ... P66937 36675148
    174130 8bp2:DDD (2.8) BS04 MN 5.6.2.2 GO:0003677 ... P66937 36675148
    174131 8bp7:B (2.71) BS01 MG 2.3.3.16 GO:0004108 ... Q31QM5 38600380
    174132 8bp7:D (2.71) BS01 MG 2.3.3.16 GO:0004108 ... Q31QM5 38600380
    174133 8bp7:E (2.71) BS01 MG 2.3.3.16 GO:0004108 ... Q31QM5 38600380
    174134 8bp7:F (2.71) BS01 MG 2.3.3.16 GO:0004108 ... Q31QM5 38600380
    174135 8bp8:D (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174136 8bp8:D (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174137 8bp8:D (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174138 8bp8:E (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174139 8bp8:E (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174140 8bp8:E (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174141 8bp8:F (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174142 8bp8:F (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174143 8bp8:F (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174144 8bp8:G (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174145 8bp8:G (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174146 8bp8:G (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174147 8bp8:H (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174148 8bp8:H (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174149 8bp8:H (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174150 8bp8:I (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174151 8bp8:I (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174152 8bp8:I (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174153 8bp8:J (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174154 8bp8:J (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174155 8bp8:J (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174156 8bp8:K (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174157 8bp8:K (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174158 8bp8:K (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174159 8bp8:L (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174160 8bp8:L (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174161 8bp8:L (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174162 8bp8:M (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174163 8bp8:M (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174164 8bp8:M (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174165 8bp8:N (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174166 8bp8:N (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174167 8bp8:N (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174168 8bp8:O (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174169 8bp8:O (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174170 8bp8:O (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174171 8bp8:P (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174172 8bp8:P (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174173 8bp8:P (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    174174 8bp8:e (2.7) BS01 ZN ? GO:0005198 ... A2T3S6 36996819
    174175 8bpa:B (3.7) BS01 ZN 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    174176 8bpa:B (3.7) BS02 CA 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    174177 8bpa:B (3.7) BS03 CA 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    174178 8bpa:C (3.7) BS01 ZN ? GO:0000122 ... Q96QT6 37137925
    174179 8bpa:C (3.7) BS02 ZN ? GO:0000122 ... Q96QT6 37137925
    174180 8bpa:C (3.7) BS03 ZN ? GO:0000122 ... Q96QT6 37137925
    174181 8bpa:C (3.7) BS04 ZN ? GO:0000122 ... Q96QT6 37137925
    174182 8bpb:B (2.8) BS01 ZN 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    174183 8bpb:B (2.8) BS02 CA 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    174184 8bpb:B (2.8) BS03 CA 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    174185 8bpb:C (2.8) BS01 ZN ? N/A Q96QT6 37137925
    174186 8bpb:C (2.8) BS02 ZN ? N/A Q96QT6 37137925
    174187 8bpc:B (2.8) BS02 ZN 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    174188 8bpc:B (2.8) BS03 CA 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    174189 8bpc:B (2.8) BS04 CA 3.5.1.-
    3.5.1.98
    GO:0000118 ... Q92769 37137925
    174190 8bpc:C (2.8) BS01 ZN ? N/A Q96QT6 37137925
    174191 8bpc:C (2.8) BS02 ZN ? N/A Q96QT6 37137925
    174192 8bpd:A (1.8) BS04 CA 3.2.1.212 GO:0046872 ... A0A0N8WFH1 37877949
    174193 8bpd:A (1.8) BS05 CA 3.2.1.212 GO:0046872 ... A0A0N8WFH1 37877949
    174194 8bpn:A (1.99) BS01 CU ? N/A W0DP94 N/A
    174195 8bpn:A (1.99) BS02 CU ? N/A W0DP94 N/A
    174196 8bpn:B (1.99) BS01 CU ? N/A W0DP94 N/A
    174197 8bpn:B (1.99) BS02 CU ? N/A W0DP94 N/A
    174198 8bpn:C (1.99) BS01 CU ? N/A W0DP94 N/A
    174199 8bpn:C (1.99) BS02 CU ? N/A W0DP94 N/A
    174200 8bpn:D (1.99) BS01 CU ? N/A W0DP94 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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