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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    169201 7x6v:B (3.6) BS01 ZN ? GO:0003723 ... P18541 37038286
    169202 7x6v:B (3.6) BS02 ZN ? GO:0003723 ... P18541 37038286
    169203 7x73:A (1.49) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 36635268
    169204 7x73:A (1.49) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 36635268
    169205 7x73:A (1.49) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 36635268
    169206 7x73:A (1.49) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 36635268
    169207 7x73:B (1.49) BS01 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 36635268
    169208 7x73:B (1.49) BS02 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 36635268
    169209 7x73:B (1.49) BS03 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 36635268
    169210 7x73:B (1.49) BS04 ZN 2.1.1.-
    2.1.1.367
    GO:0002039 ... Q96KQ7 36635268
    169211 7x74:D (3.7) BS03 MG 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    169212 7x74:D (3.7) BS04 ZN 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    169213 7x74:D (3.7) BS05 ZN 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    169214 7x74:G (3.7) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169215 7x74:G (3.7) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169216 7x74:G (3.7) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    169217 7x74:H (3.7) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169218 7x74:H (3.7) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169219 7x74:H (3.7) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    169220 7x74:M (3.7) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169221 7x74:M (3.7) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169222 7x74:M (3.7) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    169223 7x74:N (3.7) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169224 7x74:N (3.7) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169225 7x75:D (3.45) BS03 MG 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    169226 7x75:D (3.45) BS04 ZN 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    169227 7x75:D (3.45) BS05 ZN 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    169228 7x75:G (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169229 7x75:G (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169230 7x75:G (3.45) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    169231 7x75:H (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169232 7x75:H (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169233 7x75:H (3.45) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    169234 7x75:K (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169235 7x75:K (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169236 7x75:L (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169237 7x75:L (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169238 7x75:L (3.45) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    169239 7x75:M (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169240 7x75:M (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169241 7x75:M (3.45) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    169242 7x75:N (3.45) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169243 7x75:N (3.45) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169244 7x76:D (3.67) BS03 MG 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    169245 7x76:D (3.67) BS04 ZN 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    169246 7x76:D (3.67) BS05 ZN 2.7.7.6 GO:0000287 ... Q8CJT1 35871291
    169247 7x76:G (3.67) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169248 7x76:G (3.67) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169249 7x76:G (3.67) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    169250 7x76:H (3.67) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169251 7x76:H (3.67) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169252 7x76:H (3.67) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    169253 7x76:M (3.67) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169254 7x76:M (3.67) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169255 7x76:M (3.67) BS05 ZN ? GO:0000976 ... Q9L2H5 35871291
    169256 7x76:N (3.67) BS03 ZN ? GO:0000976 ... Q9L2H5 35871291
    169257 7x76:N (3.67) BS04 ZN ? GO:0000976 ... Q9L2H5 35871291
    169258 7x78:A (1.85) BS04 MG 4.1.2.17 GO:0005829 ... A6TD81 35366538
    169259 7x79:A (1.8) BS02 CA 3.4.22.52 GO:0001533 ... P07384 N/A
    169260 7x79:A (1.8) BS03 CA 3.4.22.52 GO:0001533 ... P07384 N/A
    169261 7x7a:A (3.2) BS02 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169262 7x7a:A (3.2) BS03 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169263 7x7a:A (3.2) BS04 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169264 7x7a:A (3.2) BS05 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169265 7x7h:A (2.0) BS01 CA ? GO:0000976 ... Q9KM69 36987873
    169266 7x7h:C (2.0) BS01 CA ? GO:0000976 ... Q9KM69 36987873
    169267 7x7l:A (1.887) BS01 CO ? GO:0003868 ... A0A1D6H1G0 N/A
    169268 7x7l:B (1.887) BS01 CO ? GO:0003868 ... A0A1D6H1G0 N/A
    169269 7x7l:C (1.887) BS01 CO ? GO:0003868 ... A0A1D6H1G0 N/A
    169270 7x7l:D (1.887) BS01 CO ? GO:0003868 ... A0A1D6H1G0 N/A
    169271 7x7r:A (3.5) BS03 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169272 7x7r:A (3.5) BS04 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169273 7x7r:A (3.5) BS05 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169274 7x7w:A (2.097) BS01 MN N/A N/A N/A N/A
    169275 7x7w:B (2.097) BS01 MN N/A N/A N/A N/A
    169276 7x87:B (1.79) BS01 CA ? GO:0004553 ... I0AIT9 35065074
    169277 7x87:B (1.79) BS02 CA ? GO:0004553 ... I0AIT9 35065074
    169278 7x8a:A (2.8) BS02 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169279 7x8a:A (2.8) BS03 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169280 7x8a:A (2.8) BS04 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169281 7x8a:A (2.8) BS05 ZN ? GO:0003723 ... A0A0B0EGF3 36302881
    169282 7x8d:A (1.695) BS01 CO 1.13.11.27 GO:0003868 ... P93836 N/A
    169283 7x8e:A (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    169284 7x8e:B (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    169285 7x8e:C (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    169286 7x8e:D (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    169287 7x8e:E (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    169288 7x8e:F (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    169289 7x8e:G (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    169290 7x8e:H (2.749) BS01 CO N/A GO:0003868 ... N/A N/A
    169291 7x8h:A (1.986) BS01 CO 1.13.11.27 GO:0003868 ... P93836 36599124
    169292 7x8i:A (2.096) BS01 CO 1.13.11.27 GO:0003868 ... P93836 36599124
    169293 7x9h:A (1.69) BS04 MN 3.6.1.55 GO:0000287 ... P08337 35594391
    169294 7x9h:A (1.69) BS05 MN 3.6.1.55 GO:0000287 ... P08337 35594391
    169295 7x9i:A (1.9) BS04 MN 3.6.1.55 GO:0000287 ... P08337 35594391
    169296 7x9i:A (1.9) BS05 MN 3.6.1.55 GO:0000287 ... P08337 35594391
    169297 7x9j:A (1.98) BS03 MN 3.6.1.55 GO:0000287 ... P08337 35594391
    169298 7x9k:A (1.81) BS04 MN 3.6.1.55 GO:0000287 ... P08337 35594391
    169299 7x9k:A (1.81) BS05 MN 3.6.1.55 GO:0000287 ... P08337 35594391
    169300 7x9l:A (1.82) BS03 MN 3.6.1.55 GO:0000287 ... P08337 35594391
    169301 7x9n:A (1.7) BS03 MG 3.6.1.55 GO:0000287 ... P08337 35594391
    169302 7x9n:A (1.7) BS04 MG 3.6.1.55 GO:0000287 ... P08337 35594391
    169303 7x9o:A (1.58) BS03 MG 3.6.1.55 GO:0000287 ... P08337 35594391
    169304 7x9o:A (1.58) BS04 MG 3.6.1.55 GO:0000287 ... P08337 35594391
    169305 7x9w:A (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169306 7x9w:B (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169307 7x9w:C (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169308 7x9w:D (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169309 7x9w:E (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169310 7x9w:F (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169311 7x9w:G (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169312 7x9w:H (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169313 7x9w:I (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169314 7x9w:J (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169315 7x9w:K (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169316 7x9w:L (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169317 7x9w:M (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169318 7x9w:N (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169319 7x9w:O (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169320 7x9w:P (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169321 7x9w:Q (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169322 7x9w:R (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169323 7x9w:S (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169324 7x9w:T (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169325 7x9w:U (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169326 7x9w:V (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169327 7x9w:W (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169328 7x9w:X (2.78) BS01 FE 1.13.11.55 GO:0005737 ... P29082 36191023
    169329 7x9x:A (2.3) BS01 ZN 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169330 7x9x:A (2.3) BS02 ZN 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169331 7x9x:A (2.3) BS03 ZN 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169332 7x9x:A (2.3) BS04 FE 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169333 7x9x:A (2.3) BS05 FE 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169334 7x9x:B (2.3) BS01 ZN 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169335 7x9x:B (2.3) BS02 ZN 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169336 7x9x:B (2.3) BS03 ZN 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169337 7x9x:B (2.3) BS04 FE 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169338 7x9x:B (2.3) BS05 FE 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169339 7x9z:A (2.29) BS01 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169340 7x9z:A (2.29) BS02 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169341 7x9z:A (2.29) BS03 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169342 7x9z:A (2.29) BS04 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169343 7x9z:A (2.29) BS05 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169344 7x9z:A (2.29) BS06 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169345 7x9z:B (2.29) BS01 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169346 7x9z:B (2.29) BS02 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169347 7x9z:B (2.29) BS03 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169348 7x9z:B (2.29) BS04 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169349 7x9z:B (2.29) BS05 CO 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169350 7xa1:A (2.2) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 N/A
    169351 7xa2:A (1.84) BS01 FE 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169352 7xa4:A (1.96) BS01 ZN 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169353 7xa4:A (1.96) BS02 ZN 1.16.3.2 GO:0004322 ... Q9X0L2 36315654
    169354 7xa7:A (3.31) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... A0A7D7FA76 35874946
    169355 7xa7:C (3.31) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... A0A7D7FA76 35874946
    169356 7xa7:E (3.31) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... A0A7D7FA76 35874946
    169357 7xa7:G (3.31) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... A0A7D7FA76 35874946
    169358 7xa9:A (2.84) BS05 MG ? GO:0005247 ... P92941 36581207
    169359 7xa9:B (2.84) BS05 MG ? GO:0005247 ... P92941 36581207
    169360 7xaa:A (2.10041) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 35985255
    169361 7xaa:B (2.10041) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 35985255
    169362 7xab:A (2.00067) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 35985255
    169363 7xab:B (2.00067) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 35985255
    169364 7xam:C (3.5) BS02 MG ? GO:0002181 ... A0QSD4 37709237
    169365 7xam:C (3.5) BS03 MG ? GO:0002181 ... A0QSD4 37709237
    169366 7xam:F (3.5) BS03 MG ? GO:0000049 ... A0QSG1 37709237
    169367 7xam:Y (3.5) BS02 ZN ? GO:0003735 ... A0QV03 37709237
    169368 7xam:c (3.5) BS02 ZN ? GO:0003735 ... A0QS39 37709237
    169369 7xam:f (3.5) BS02 ZN ? GO:0003735 ... A0QSL4 37709237
    169370 7xam:g (3.5) BS02 ZN ? GO:0003735 ... A0R215 37709237
    169371 7xaz:A (3.0) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 35809570
    169372 7xaz:C (3.0) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 35809570
    169373 7xb0:A (2.9) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 35809570
    169374 7xb1:A (2.7) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 35809570
    169375 7xb6:A (2.901) BS01 MG ? GO:0003824 ... A0A7U3NFH8 N/A
    169376 7xb6:B (2.901) BS01 MG ? GO:0003824 ... A0A7U3NFH8 N/A
    169377 7xb6:C (2.901) BS01 MG ? GO:0003824 ... A0A7U3NFH8 N/A
    169378 7xb6:D (2.901) BS01 MG ? GO:0003824 ... A0A7U3NFH8 N/A
    169379 7xbb:A (2.10001) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 35688178
    169380 7xbb:B (2.10001) BS01 ZN 3.1.4.53 GO:0004114 ... Q08499 35688178
    169381 7xbf:A (3.51) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 36519268
    169382 7xbf:C (3.51) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 36519268
    169383 7xbg:A (3.37) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 36519268
    169384 7xbg:C (3.37) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 36519268
    169385 7xbh:A (3.02) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0006508 ... Q9BYF1 36519268
    169386 7xbk:G (3.7) BS02 MG 3.6.1.- GO:0003674 ... Q9H078 36745679
    169387 7xbk:H (3.7) BS01 MG 3.6.1.- GO:0003674 ... Q9H078 36745679
    169388 7xbt:A (1.84) BS02 MG ? N/A A6YEH8 36278314
    169389 7xby:A (2.85) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... F6V9L3 35729237
    169390 7xbz:A (2.15) BS02 MG 3.4.21.92 GO:0004176 ... Q2G036 36376309
    169391 7xbz:A (2.15) BS03 MG 3.4.21.92 GO:0004176 ... Q2G036 36376309
    169392 7xbz:B (2.15) BS02 MG 3.4.21.92 GO:0004176 ... Q2G036 36376309
    169393 7xbz:C (2.15) BS02 MG 3.4.21.92 GO:0004176 ... Q2G036 36376309
    169394 7xbz:G (2.15) BS02 MG 3.4.21.92 GO:0004176 ... Q2G036 36376309
    169395 7xbz:H (2.15) BS01 MG 3.4.21.92 GO:0004176 ... Q2G036 36376309
    169396 7xbz:I (2.15) BS03 MG 3.4.21.92 GO:0004176 ... Q2G036 36376309
    169397 7xbz:K (2.15) BS02 MG 3.4.21.92 GO:0004176 ... Q2G036 36376309
    169398 7xbz:M (2.15) BS02 MG 3.4.21.92 GO:0004176 ... Q2G036 36376309
    169399 7xbz:N (2.15) BS03 MG 3.4.21.92 GO:0004176 ... Q2G036 36376309
    169400 7xc7:A (3.1) BS03 ZN ? GO:0003723 ... A0A0B0EGF3 36302881

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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