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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    160401 7pzu:A (2.15) BS01 ZN 3.5.1.108 GO:0006796 ... P47205 N/A
    160402 7pzv:A (1.92) BS01 ZN 3.5.1.108 GO:0006796 ... P47205 N/A
    160403 7pzw:A (2.0) BS01 ZN 3.5.1.108 GO:0006796 ... P47205 N/A
    160404 7pzx:A (2.39) BS01 ZN 3.5.1.108 GO:0006796 ... P47205 N/A
    160405 7pzy:AH (2.32) BS02 MG ? GO:0003735 ... A0A1D8PDZ1 35613268
    160406 7pzy:AK (2.32) BS03 ZN ? GO:0003723 ... A0A1D8PF45 35613268
    160407 7pzy:AN (2.32) BS02 ZN ? GO:0003735 ... A0A1D8PL68 35613268
    160408 7pzy:AP (2.32) BS03 ZN ? GO:0003735 ... A0A1D8PEV4 35613268
    160409 7pzy:AP (2.32) BS04 MG ? GO:0003735 ... A0A1D8PEV4 35613268
    160410 7pzy:AQ (2.32) BS02 ZN ? GO:0003735 ... A0A1D8PP14 35613268
    160411 7pzy:e (2.32) BS02 ZN ? GO:0002181 ... A0A1D8PTR4 35613268
    160412 7pzy:g (2.32) BS02 ZN ? GO:0003735 ... Q5A109 35613268
    160413 7pzy:j (2.32) BS03 MG ? GO:0002181 ... A0A1D8PF08 35613268
    160414 7pzy:x (2.32) BS03 MG ? GO:0002181 ... Q59TE0 35613268
    160415 7q01:A (2.01) BS01 ZN 3.5.1.108 GO:0006796 ... P47205 N/A
    160416 7q03:A (2.1) BS02 MG N/A GO:0004455 ... N/A 34827677
    160417 7q04:D (2.281) BS02 FE 1.14.12.15 GO:0005506 ... Q3C1D5 35312352
    160418 7q05:D (2.08) BS03 FE 1.14.12.15 GO:0005506 ... Q3C1D5 35312352
    160419 7q05:F (2.08) BS03 FE 1.14.12.15 GO:0005506 ... Q3C1D5 35312352
    160420 7q06:D (1.95) BS02 FE 1.14.12.15 GO:0005506 ... Q3C1D5 35312352
    160421 7q06:F (1.95) BS02 FE 1.14.12.15 GO:0005506 ... Q3C1D5 35312352
    160422 7q08:AK (2.56) BS03 ZN ? GO:0003723 ... A0A1D8PF45 35613268
    160423 7q08:AN (2.56) BS02 ZN ? GO:0003735 ... A0A1D8PL68 35613268
    160424 7q08:AP (2.56) BS02 ZN ? GO:0003735 ... A0A1D8PEV4 35613268
    160425 7q08:AQ (2.56) BS02 ZN ? GO:0003735 ... A0A1D8PP14 35613268
    160426 7q08:e (2.56) BS02 ZN ? GO:0002181 ... A0A1D8PTR4 35613268
    160427 7q0c:A (1.12) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 35008553
    160428 7q0c:B (1.12) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 35008553
    160429 7q0d:A (1.24) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00915 35008553
    160430 7q0d:B (1.24) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00915 35008553
    160431 7q0e:A (1.3) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 35008553
    160432 7q0f:AK (2.64) BS03 ZN ? GO:0003723 ... A0A1D8PF45 35613268
    160433 7q0f:AN (2.64) BS02 ZN ? GO:0003735 ... A0A1D8PL68 35613268
    160434 7q0f:AP (2.64) BS03 ZN ? GO:0003735 ... A0A1D8PEV4 35613268
    160435 7q0f:AQ (2.64) BS02 ZN ? GO:0003735 ... A0A1D8PP14 35613268
    160436 7q0f:e (2.64) BS02 ZN ? GO:0002181 ... A0A1D8PTR4 35613268
    160437 7q0j:D (4.3) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 35318334
    160438 7q0j:D (4.3) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 35318334
    160439 7q0j:D (4.3) BS06 MG 2.7.7.6 GO:0000287 ... P0A8T7 35318334
    160440 7q0k:D (4.0) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 35318334
    160441 7q0k:D (4.0) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 35318334
    160442 7q0p:AK (2.77) BS03 ZN ? GO:0003723 ... A0A1D8PF45 35613268
    160443 7q0p:AN (2.77) BS02 ZN ? GO:0003735 ... A0A1D8PL68 35613268
    160444 7q0p:AP (2.77) BS03 ZN ? GO:0003735 ... A0A1D8PEV4 35613268
    160445 7q0p:AQ (2.77) BS02 ZN ? GO:0003735 ... A0A1D8PP14 35613268
    160446 7q0p:e (2.77) BS02 ZN ? GO:0002181 ... A0A1D8PTR4 35613268
    160447 7q0p:g (2.77) BS02 ZN ? GO:0003735 ... Q5A109 35613268
    160448 7q0r:AK (2.67) BS03 ZN ? GO:0003723 ... A0A1D8PF45 35613268
    160449 7q0r:AN (2.67) BS02 ZN ? GO:0003735 ... A0A1D8PL68 35613268
    160450 7q0r:AP (2.67) BS03 ZN ? GO:0003735 ... A0A1D8PEV4 35613268
    160451 7q0r:AQ (2.67) BS02 ZN ? GO:0003735 ... A0A1D8PP14 35613268
    160452 7q0r:e (2.67) BS02 ZN ? GO:0002181 ... A0A1D8PTR4 35613268
    160453 7q0r:g (2.67) BS02 ZN ? GO:0003735 ... Q5A109 35613268
    160454 7q0t:A (1.34) BS01 V 3.2.1.17 GO:0003796 ... P00698 35486702
    160455 7q0u:A (1.19) BS02 V 3.2.1.17 GO:0003796 ... P00698 35486702
    160456 7q0v:A (1.12) BS02 V 3.2.1.17 GO:0003796 ... P00698 35486702
    160457 7q0w:A (1.2) BS01 CA 3.4.21.4 GO:0004175 ... P00760 35486702
    160458 7q0x:A (1.09) BS04 CA 3.4.21.4 GO:0004175 ... P00760 35486702
    160459 7q1b:A (1.75) BS01 ZN ? N/A A0A1B1JH81 34936867
    160460 7q1c:A (2.3) BS01 ZN ? N/A A0A1B1JH81 34936867
    160461 7q1c:B (2.3) BS01 ZN ? N/A A0A1B1JH81 34936867
    160462 7q1k:A (1.36) BS01 CU 3.2.1.4 GO:0004497 ... G3XAP7 N/A
    160463 7q1u:A (2.7) BS04 MG 2.3.1.- GO:0000139 ... Q5VTY9 34890564
    160464 7q1w:A (1.65) BS03 CA ? GO:0005975 ... A7B6A6 34936658
    160465 7q1w:A (1.65) BS04 MG ? GO:0005975 ... A7B6A6 34936658
    160466 7q20:A (1.95) BS03 CA ? GO:0005975 ... A7B6A6 34936658
    160467 7q20:A (1.95) BS04 CA ? GO:0005975 ... A7B6A6 34936658
    160468 7q20:A (1.95) BS05 CA ? GO:0005975 ... A7B6A6 34936658
    160469 7q20:A (1.95) BS06 MG ? GO:0005975 ... A7B6A6 34936658
    160470 7q20:G (1.95) BS03 CA ? GO:0005975 ... A7B6A6 34936658
    160471 7q20:G (1.95) BS04 MG ? GO:0005975 ... A7B6A6 34936658
    160472 7q20:G (1.95) BS05 MG ? GO:0005975 ... A7B6A6 34936658
    160473 7q20:G (1.95) BS06 MG ? GO:0005975 ... A7B6A6 34936658
    160474 7q21:D (2.9) BS03 CU 7.1.1.9 GO:0004129 ... Q79VD7 34910901
    160475 7q21:D (2.9) BS04 CA 7.1.1.9 GO:0004129 ... Q79VD7 34910901
    160476 7q21:G (2.9) BS01 CU 7.1.1.9 GO:0004129 ... Q8NNK2 34910901
    160477 7q21:G (2.9) BS02 CU 7.1.1.9 GO:0004129 ... Q8NNK2 34910901
    160478 7q21:d (2.9) BS03 CU 7.1.1.9 GO:0004129 ... Q79VD7 34910901
    160479 7q21:d (2.9) BS04 CA 7.1.1.9 GO:0004129 ... Q79VD7 34910901
    160480 7q21:g (2.9) BS01 CU 7.1.1.9 GO:0004129 ... Q8NNK2 34910901
    160481 7q21:g (2.9) BS02 CU 7.1.1.9 GO:0004129 ... Q8NNK2 34910901
    160482 7q24:A (2.0) BS01 ZN 3.4.15.1 GO:0006508 ... P12821 35113565
    160483 7q24:A (2.0) BS02 MG 3.4.15.1 GO:0006508 ... P12821 35113565
    160484 7q24:B (2.0) BS02 ZN 3.4.15.1 GO:0006508 ... P12821 35113565
    160485 7q25:A (1.6) BS02 ZN 3.4.15.1 GO:0006508 ... P12821 35113565
    160486 7q25:A (1.6) BS03 MG 3.4.15.1 GO:0006508 ... P12821 35113565
    160487 7q25:B (1.6) BS03 ZN 3.4.15.1 GO:0006508 ... P12821 35113565
    160488 7q25:B (1.6) BS04 MG 3.4.15.1 GO:0006508 ... P12821 35113565
    160489 7q26:A (1.7) BS02 ZN 3.4.15.1 GO:0006508 ... P12821 35113565
    160490 7q26:A (1.7) BS03 MG 3.4.15.1 GO:0006508 ... P12821 35113565
    160491 7q26:B (1.7) BS03 ZN 3.4.15.1 GO:0006508 ... P12821 35113565
    160492 7q26:B (1.7) BS04 MG 3.4.15.1 GO:0006508 ... P12821 35113565
    160493 7q27:A (1.5) BS02 ZN 3.4.15.1 GO:0006508 ... P12821 35113565
    160494 7q28:A (1.65) BS03 ZN 3.4.15.1 GO:0006508 ... P12821 35113565
    160495 7q29:A (1.6) BS03 ZN 3.4.15.1 GO:0006508 ... P12821 35113565
    160496 7q2a:A (1.6) BS01 FE 1.13.11.2 GO:0018577 ... Q0S9X1 35346686
    160497 7q2a:A (1.6) BS02 CA 1.13.11.2 GO:0018577 ... Q0S9X1 35346686
    160498 7q2a:B (1.6) BS01 FE 1.13.11.2 GO:0018577 ... Q0S9X1 35346686
    160499 7q2a:B (1.6) BS02 CA 1.13.11.2 GO:0018577 ... Q0S9X1 35346686
    160500 7q2a:C (1.6) BS01 FE 1.13.11.2 GO:0018577 ... Q0S9X1 35346686
    160501 7q2a:C (1.6) BS02 CA 1.13.11.2 GO:0018577 ... Q0S9X1 35346686
    160502 7q2a:C (1.6) BS03 CA 1.13.11.2 GO:0018577 ... Q0S9X1 35346686
    160503 7q2a:D (1.6) BS01 FE 1.13.11.2 GO:0018577 ... Q0S9X1 35346686
    160504 7q2a:D (1.6) BS02 CA 1.13.11.2 GO:0018577 ... Q0S9X1 35346686
    160505 7q2x:A (3.0) BS05 MG ? GO:0000070 ... P38989 35349345
    160506 7q2x:B (3.0) BS06 MG ? GO:0000070 ... Q12267 35349345
    160507 7q2y:A (3.0) BS05 MG ? GO:0000070 ... P38989 35349345
    160508 7q2y:B (3.0) BS05 MG ? GO:0000070 ... Q12267 35349345
    160509 7q36:A (2.6) BS01 NA ? GO:0016020 ... N0DKS8 35422073
    160510 7q39:AAA (2.1) BS01 FE N/A GO:0009263 ... N/A 34941255
    160511 7q39:AAA (2.1) BS02 FE N/A GO:0009263 ... N/A 34941255
    160512 7q3c:AAA (2.15) BS01 FE N/A GO:0009263 ... N/A 34941255
    160513 7q3g:A (3.5) BS01 CA ? GO:0004888 ... V4JF97 36480474
    160514 7q3g:A (3.5) BS02 CA ? GO:0004888 ... V4JF97 36480474
    160515 7q3g:B (3.5) BS01 CA ? GO:0004888 ... V4JF97 36480474
    160516 7q3g:B (3.5) BS02 CA ? GO:0004888 ... V4JF97 36480474
    160517 7q3g:C (3.5) BS01 CA ? GO:0004888 ... V4JF97 36480474
    160518 7q3g:C (3.5) BS02 CA ? GO:0004888 ... V4JF97 36480474
    160519 7q3g:D (3.5) BS01 CA ? GO:0004888 ... V4JF97 36480474
    160520 7q3g:D (3.5) BS02 CA ? GO:0004888 ... V4JF97 36480474
    160521 7q3g:E (3.5) BS01 CA ? GO:0004888 ... V4JF97 36480474
    160522 7q3g:E (3.5) BS02 CA ? GO:0004888 ... V4JF97 36480474
    160523 7q3l:9 (2.21) BS02 ZN ? GO:0000375 ... Q12874 34822310
    160524 7q3l:G (2.21) BS01 ZN ? GO:0000398 ... Q7RTV0 34822310
    160525 7q3l:G (2.21) BS02 ZN ? GO:0000398 ... Q7RTV0 34822310
    160526 7q3l:G (2.21) BS03 ZN ? GO:0000398 ... Q7RTV0 34822310
    160527 7q3y:A (4.34) BS01 ZN 3.4.15.1 GO:0001666 ... P12821 35818993
    160528 7q3z:A (1.85) BS01 ZN ? N/A Q08AF3 35037067
    160529 7q3z:B (1.85) BS01 ZN ? N/A Q08AF3 35037067
    160530 7q49:A (3.72) BS01 ZN 3.4.15.1 GO:0001666 ... P12821 35818993
    160531 7q4d:A (3.78) BS01 ZN 3.4.15.1 GO:0001666 ... P12821 35818993
    160532 7q4d:B (3.78) BS01 ZN 3.4.15.1 GO:0001666 ... P12821 35818993
    160533 7q4e:A (3.63) BS01 ZN 3.4.15.1 GO:0001666 ... P12821 35818993
    160534 7q4i:A (2.4) BS03 MN 2.4.1.122 GO:0016020 ... Q7K237 35504880
    160535 7q4i:B (2.4) BS03 MN 2.4.1.122 GO:0016020 ... Q7K237 35504880
    160536 7q4o:1 (2.1) BS02 ZN ? GO:0000245 ... Q15428 34822310
    160537 7q4o:9 (2.1) BS02 ZN ? GO:0000375 ... Q12874 34822310
    160538 7q4o:G (2.1) BS01 ZN ? GO:0000398 ... Q7RTV0 34822310
    160539 7q4o:G (2.1) BS02 ZN ? GO:0000398 ... Q7RTV0 34822310
    160540 7q4o:G (2.1) BS03 ZN ? GO:0000398 ... Q7RTV0 34822310
    160541 7q4p:1 (2.15) BS02 ZN ? GO:0000245 ... Q15428 34822310
    160542 7q4p:9 (2.15) BS02 ZN ? GO:0000375 ... Q12874 34822310
    160543 7q4p:G (2.15) BS01 ZN ? GO:0000398 ... Q7RTV0 34822310
    160544 7q4p:G (2.15) BS02 ZN ? GO:0000398 ... Q7RTV0 34822310
    160545 7q4p:G (2.15) BS03 ZN ? GO:0000398 ... Q7RTV0 34822310
    160546 7q4r:A (1.79) BS01 MG ? GO:0005524 ... P0DMV8 35164081
    160547 7q4u:CA (4.39) BS01 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160548 7q4u:CA (4.39) BS02 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160549 7q4u:CA (4.39) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160550 7q4u:D (4.39) BS01 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160551 7q4u:D (4.39) BS02 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160552 7q4u:D (4.39) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160553 7q4u:IA (4.39) BS01 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160554 7q4u:IA (4.39) BS02 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160555 7q4u:IA (4.39) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160556 7q4u:J (4.39) BS01 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160557 7q4u:J (4.39) BS02 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160558 7q4u:J (4.39) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160559 7q4u:OA (4.39) BS01 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160560 7q4u:OA (4.39) BS02 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160561 7q4u:OA (4.39) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160562 7q4u:P (4.39) BS01 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160563 7q4u:P (4.39) BS02 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160564 7q4u:P (4.39) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160565 7q4u:UA (4.39) BS01 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160566 7q4u:UA (4.39) BS02 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160567 7q4u:UA (4.39) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160568 7q4u:W (4.39) BS01 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160569 7q4u:W (4.39) BS02 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160570 7q4u:W (4.39) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160571 7q4v:B (4.7) BS04 ZN 1.12.7.2 GO:0008137 ... H6LFG4 36811855
    160572 7q4v:F (4.7) BS03 ZN 1.12.7.2 GO:0008137 ... H6LFG4 36811855
    160573 7q4w:B (3.78) BS05 ZN 1.12.7.2 GO:0008137 ... H6LFG4 36811855
    160574 7q4w:F (3.78) BS01 ZN 1.12.7.2 GO:0008137 ... H6LFG4 36811855
    160575 7q52:AAA (2.35) BS01 FE 2.7.11.1 GO:0004672 ... P9WI73 35737472
    160576 7q59:D (4.36) BS01 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160577 7q59:D (4.36) BS02 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160578 7q59:D (4.36) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160579 7q59:d (4.36) BS01 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160580 7q59:d (4.36) BS02 ZN 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160581 7q59:d (4.36) BS03 MG 2.7.7.6 GO:0000287 ... P9WGY7 N/A
    160582 7q5n:G (2.5) BS01 ZN ? GO:0002098 ... G0SE11 36102610
    160583 7q5n:J (2.5) BS01 ZN ? GO:0002098 ... G0SE11 36102610
    160584 7q5n:J (2.5) BS02 ZN ? GO:0002098 ... G0SE11 36102610
    160585 7q5v:A (1.17) BS02 MN 1.14.11.29 GO:0005506 ... Q9GZT9 37449559
    160586 7q5v:A (1.17) BS04 MG 1.14.11.29 GO:0005506 ... Q9GZT9 37449559
    160587 7q5v:A (1.17) BS05 MG 1.14.11.29 GO:0005506 ... Q9GZT9 37449559
    160588 7q5x:A (1.21) BS02 MN 1.14.11.29 GO:0005506 ... Q9GZT9 37449559
    160589 7q5x:A (1.21) BS04 MG 1.14.11.29 GO:0005506 ... Q9GZT9 37449559
    160590 7q6i:C (3.6) BS03 MG ? GO:0005524 ... A0A090T942 36123441
    160591 7q6i:D (3.6) BS02 MG ? GO:0005524 ... A0A090T942 36123441
    160592 7q6i:G (3.6) BS02 MG ? GO:0005524 ... A0A090T942 36123441
    160593 7q6i:I (3.6) BS02 MG ? GO:0005524 ... A0A090T942 36123441
    160594 7q6i:J (3.6) BS02 MG ? GO:0005524 ... A0A090T942 36123441
    160595 7q6i:K (3.6) BS02 MG ? GO:0005524 ... A0A090T942 36123441
    160596 7q6i:L (3.6) BS02 MG ? GO:0005524 ... A0A090T942 36123441
    160597 7q6i:N (3.6) BS02 MG ? GO:0005524 ... A0A090T942 36123441
    160598 7q6i:P (3.6) BS02 MG ? GO:0005524 ... A0A090T942 36123441
    160599 7q7d:A (2.6) BS02 MG 2.7.11.1 GO:0004672 ... O94768 N/A
    160600 7q7e:A (2.85) BS02 MG 2.7.11.1 GO:0004672 ... O94768 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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