Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    122001 6elz:j (3.3) BS03 ZN ? GO:0000448 ... P49166 29245012
    122002 6em1:j (3.6) BS03 ZN ? GO:0000448 ... P49166 29245012
    122003 6em1:u (3.6) BS02 ZN ? GO:0001671 ... Q07915 29245012
    122004 6en3:A (2.903) BS04 CA 2.3.1.-
    3.4.22.-
    6.3.2.-    		 N/A Q9KS12 29760474
    122005 6en4:D (3.08) BS01 ZN ? GO:0000398 ... Q7RTV0 29656923
    122006 6en4:D (3.08) BS02 ZN ? GO:0000398 ... Q7RTV0 29656923
    122007 6en4:D (3.08) BS03 ZN ? GO:0000398 ... Q7RTV0 29656923
    122008 6en5:A (1.75) BS02 ZN 3.4.15.1 GO:0006508 ... P12821 29206036
    122009 6en5:A (1.75) BS04 MG 3.4.15.1 GO:0006508 ... P12821 29206036
    122010 6en5:B (1.75) BS01 ZN 3.4.15.1 GO:0006508 ... P12821 29206036
    122011 6en5:B (1.75) BS03 MG 3.4.15.1 GO:0006508 ... P12821 29206036
    122012 6en5:C (1.75) BS01 ZN 3.4.15.1 GO:0006508 ... P12821 29206036
    122013 6en5:C (1.75) BS03 MG 3.4.15.1 GO:0006508 ... P12821 29206036
    122014 6en5:D (1.75) BS01 ZN 3.4.15.1 GO:0006508 ... P12821 29206036
    122015 6en5:D (1.75) BS03 MG 3.4.15.1 GO:0006508 ... P12821 29206036
    122016 6en6:A (1.8) BS01 ZN 3.4.15.1 GO:0006508 ... P12821 29206036
    122017 6en6:A (1.8) BS03 MG 3.4.15.1 GO:0006508 ... P12821 29206036
    122018 6en6:B (1.8) BS01 ZN 3.4.15.1 GO:0006508 ... P12821 29206036
    122019 6en6:B (1.8) BS03 MG 3.4.15.1 GO:0006508 ... P12821 29206036
    122020 6en6:C (1.8) BS01 ZN 3.4.15.1 GO:0006508 ... P12821 29206036
    122021 6en6:C (1.8) BS03 MG 3.4.15.1 GO:0006508 ... P12821 29206036
    122022 6en6:D (1.8) BS01 ZN 3.4.15.1 GO:0006508 ... P12821 29206036
    122023 6en6:D (1.8) BS03 MG 3.4.15.1 GO:0006508 ... P12821 29206036
    122024 6en9:L (1.5) BS04 MG 1.12.99.6 GO:0005515 ... P0ACE0 29555844
    122025 6en9:M (1.5) BS04 MG 1.12.99.6 GO:0005515 ... P0ACE0 29555844
    122026 6enb:A (1.84) BS02 ZN 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 29051536
    122027 6enc:A (1.95) BS01 ZN 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 29051536
    122028 6end:A (2.24) BS01 ZN 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 29051536
    122029 6enl:A (2.2) BS02 ZN 4.2.1.11 GO:0000015 ... P00924 2007121
    122030 6enm:A (1.59) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 29727184
    122031 6enm:A (1.59) BS03 ZN 3.4.24.65 GO:0004222 ... P39900 29727184
    122032 6enm:A (1.59) BS04 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    122033 6enm:A (1.59) BS05 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    122034 6enm:A (1.59) BS06 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    122035 6enm:B (1.59) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 29727184
    122036 6enm:B (1.59) BS03 ZN 3.4.24.65 GO:0004222 ... P39900 29727184
    122037 6enm:B (1.59) BS04 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    122038 6enm:B (1.59) BS05 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    122039 6enm:B (1.59) BS06 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    122040 6env:A (1.82) BS01 AU ? GO:0005506 ... P02791 29072740
    122041 6env:A (1.82) BS02 AU ? GO:0005506 ... P02791 29072740
    122042 6enw:A (2.6) BS01 AU ? GO:0005506 ... P02791 29072740
    122043 6enx:A (1.95) BS01 ZN 2.3.1.- GO:0036054 ... Q6DHI5 29044784
    122044 6eo0:A (2.4) BS01 ZN 2.3.1.- GO:0036054 ... Q6DHI5 29044784
    122045 6eo0:B (2.4) BS01 ZN 2.3.1.- GO:0036054 ... Q6DHI5 29044784
    122046 6eo0:C (2.4) BS03 ZN 2.3.1.- GO:0036054 ... Q6DHI5 29044784
    122047 6eo0:D (2.4) BS02 ZN 2.3.1.- GO:0036054 ... Q6DHI5 29044784
    122048 6eoi:A (1.76) BS01 MG ? GO:0000166 ... Q0CCT3 N/A
    122049 6eoi:B (1.76) BS03 MG ? GO:0000166 ... Q0CCT3 N/A
    122050 6eoj:B (3.55) BS01 ZN ? GO:0003723 ... Q06102 29074584
    122051 6eoj:B (3.55) BS02 ZN ? GO:0003723 ... Q06102 29074584
    122052 6eok:B (2.5) BS01 ZN 3.5.1.1 GO:0004067 ... P00805 30462348
    122053 6eok:C (2.5) BS01 ZN 3.5.1.1 GO:0004067 ... P00805 30462348
    122054 6eok:D (2.5) BS01 ZN 3.5.1.1 GO:0004067 ... P00805 30462348
    122055 6eom:A (2.103) BS01 ZN ? GO:0005737 ... H1XW48 29420664
    122056 6eon:A (1.75) BS02 CA ? GO:0004553 ... Q8AB22 30349080
    122057 6eop:A (2.4) BS02 CA 3.4.14.5 GO:0004177 ... Q6V1X1 29382749
    122058 6eop:B (2.4) BS02 CA 3.4.14.5 GO:0004177 ... Q6V1X1 29382749
    122059 6eop:C (2.4) BS02 CA 3.4.14.5 GO:0004177 ... Q6V1X1 29382749
    122060 6eox:A (1.3) BS01 ZN 3.4.24.65 GO:0004222 ... P39900 29727184
    122061 6eox:A (1.3) BS02 ZN 3.4.24.65 GO:0004222 ... P39900 29727184
    122062 6eox:A (1.3) BS03 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    122063 6eox:A (1.3) BS04 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    122064 6eox:A (1.3) BS05 CA 3.4.24.65 GO:0004222 ... P39900 29727184
    122065 6ep0:A (2.35) BS02 CA N/A N/A N/A 30850593
    122066 6epa:A (1.82) BS01 CA ? GO:0005509 ... Q9VWX8 29966094
    122067 6epa:A (1.82) BS02 CA ? GO:0005509 ... Q9VWX8 29966094
    122068 6epa:A (1.82) BS03 CA ? GO:0005509 ... Q9VWX8 29966094
    122069 6epb:A (1.75) BS01 ZN 3.2.1.14 GO:0004553 ... P48827 29566690
    122070 6epy:A (2.04) BS04 CA N/A N/A N/A 29602905
    122071 6epy:A (2.04) BS05 CA N/A N/A N/A 29602905
    122072 6epy:A (2.04) BS06 CA N/A N/A N/A 29602905
    122073 6epy:A (2.04) BS07 CA N/A N/A N/A 29602905
    122074 6epy:A (2.04) BS08 CA N/A N/A N/A 29602905
    122075 6epy:A (2.04) BS09 CA N/A N/A N/A 29602905
    122076 6epy:A (2.04) BS10 CA N/A N/A N/A 29602905
    122077 6epy:A (2.04) BS11 CA N/A N/A N/A 29602905
    122078 6epy:A (2.04) BS12 CA N/A N/A N/A 29602905
    122079 6epy:A (2.04) BS13 CA N/A N/A N/A 29602905
    122080 6epy:A (2.04) BS14 CA N/A N/A N/A 29602905
    122081 6epy:A (2.04) BS15 CA N/A N/A N/A 29602905
    122082 6epy:A (2.04) BS16 CA N/A N/A N/A 29602905
    122083 6epy:A (2.04) BS17 CA N/A N/A N/A 29602905
    122084 6epy:A (2.04) BS18 CA N/A N/A N/A 29602905
    122085 6epy:A (2.04) BS19 CA N/A N/A N/A 29602905
    122086 6epy:A (2.04) BS20 CA N/A N/A N/A 29602905
    122087 6epy:A (2.04) BS21 CA N/A N/A N/A 29602905
    122088 6epy:A (2.04) BS22 CA N/A N/A N/A 29602905
    122089 6epy:A (2.04) BS23 CA N/A N/A N/A 29602905
    122090 6epy:A (2.04) BS24 CA N/A N/A N/A 29602905
    122091 6epy:A (2.04) BS25 CA N/A N/A N/A 29602905
    122092 6epy:A (2.04) BS26 CA N/A N/A N/A 29602905
    122093 6epy:A (2.04) BS27 CA N/A N/A N/A 29602905
    122094 6epy:A (2.04) BS28 CA N/A N/A N/A 29602905
    122095 6epy:A (2.04) BS29 CA N/A N/A N/A 29602905
    122096 6epy:A (2.04) BS30 CA N/A N/A N/A 29602905
    122097 6epy:A (2.04) BS31 CA N/A N/A N/A 29602905
    122098 6epy:A (2.04) BS32 CA N/A N/A N/A 29602905
    122099 6epy:A (2.04) BS33 CA N/A N/A N/A 29602905
    122100 6epy:A (2.04) BS34 CA N/A N/A N/A 29602905
    122101 6epy:A (2.04) BS35 CA N/A N/A N/A 29602905
    122102 6epy:A (2.04) BS36 CA N/A N/A N/A 29602905
    122103 6epy:A (2.04) BS37 CA N/A N/A N/A 29602905
    122104 6epy:B (2.04) BS04 CA N/A N/A N/A 29602905
    122105 6epy:B (2.04) BS05 CA N/A N/A N/A 29602905
    122106 6epy:B (2.04) BS06 CA N/A N/A N/A 29602905
    122107 6epy:B (2.04) BS07 CA N/A N/A N/A 29602905
    122108 6epy:B (2.04) BS08 CA N/A N/A N/A 29602905
    122109 6epy:B (2.04) BS09 CA N/A N/A N/A 29602905
    122110 6epy:B (2.04) BS10 CA N/A N/A N/A 29602905
    122111 6epy:B (2.04) BS11 CA N/A N/A N/A 29602905
    122112 6epy:B (2.04) BS12 CA N/A N/A N/A 29602905
    122113 6epy:B (2.04) BS13 CA N/A N/A N/A 29602905
    122114 6epy:B (2.04) BS14 CA N/A N/A N/A 29602905
    122115 6epy:B (2.04) BS15 CA N/A N/A N/A 29602905
    122116 6epy:B (2.04) BS16 CA N/A N/A N/A 29602905
    122117 6epy:B (2.04) BS17 CA N/A N/A N/A 29602905
    122118 6epy:B (2.04) BS18 CA N/A N/A N/A 29602905
    122119 6epy:B (2.04) BS19 CA N/A N/A N/A 29602905
    122120 6epy:B (2.04) BS20 CA N/A N/A N/A 29602905
    122121 6epy:B (2.04) BS21 CA N/A N/A N/A 29602905
    122122 6epy:B (2.04) BS22 CA N/A N/A N/A 29602905
    122123 6epy:B (2.04) BS23 CA N/A N/A N/A 29602905
    122124 6epy:B (2.04) BS24 CA N/A N/A N/A 29602905
    122125 6epy:B (2.04) BS25 CA N/A N/A N/A 29602905
    122126 6epy:B (2.04) BS26 CA N/A N/A N/A 29602905
    122127 6epy:B (2.04) BS27 CA N/A N/A N/A 29602905
    122128 6epy:B (2.04) BS28 CA N/A N/A N/A 29602905
    122129 6epy:B (2.04) BS29 CA N/A N/A N/A 29602905
    122130 6epy:B (2.04) BS30 CA N/A N/A N/A 29602905
    122131 6epy:B (2.04) BS31 CA N/A N/A N/A 29602905
    122132 6epy:B (2.04) BS32 CA N/A N/A N/A 29602905
    122133 6epy:B (2.04) BS33 CA N/A N/A N/A 29602905
    122134 6epy:B (2.04) BS34 CA N/A N/A N/A 29602905
    122135 6epy:B (2.04) BS35 CA N/A N/A N/A 29602905
    122136 6epy:B (2.04) BS36 CA N/A N/A N/A 29602905
    122137 6epy:C (2.04) BS04 CA N/A N/A N/A 29602905
    122138 6epy:C (2.04) BS05 CA N/A N/A N/A 29602905
    122139 6epy:C (2.04) BS06 CA N/A N/A N/A 29602905
    122140 6epy:C (2.04) BS07 CA N/A N/A N/A 29602905
    122141 6epy:C (2.04) BS08 CA N/A N/A N/A 29602905
    122142 6epy:C (2.04) BS09 CA N/A N/A N/A 29602905
    122143 6epy:C (2.04) BS10 CA N/A N/A N/A 29602905
    122144 6epy:C (2.04) BS11 CA N/A N/A N/A 29602905
    122145 6epy:C (2.04) BS12 CA N/A N/A N/A 29602905
    122146 6epy:C (2.04) BS13 CA N/A N/A N/A 29602905
    122147 6epy:C (2.04) BS14 CA N/A N/A N/A 29602905
    122148 6epy:C (2.04) BS15 CA N/A N/A N/A 29602905
    122149 6epy:C (2.04) BS16 CA N/A N/A N/A 29602905
    122150 6epy:C (2.04) BS17 CA N/A N/A N/A 29602905
    122151 6epy:C (2.04) BS18 CA N/A N/A N/A 29602905
    122152 6epy:C (2.04) BS19 CA N/A N/A N/A 29602905
    122153 6epy:C (2.04) BS20 CA N/A N/A N/A 29602905
    122154 6epy:C (2.04) BS21 CA N/A N/A N/A 29602905
    122155 6epy:C (2.04) BS22 CA N/A N/A N/A 29602905
    122156 6epy:C (2.04) BS23 CA N/A N/A N/A 29602905
    122157 6epy:C (2.04) BS24 CA N/A N/A N/A 29602905
    122158 6epy:D (2.04) BS04 CA N/A N/A N/A 29602905
    122159 6epy:D (2.04) BS05 CA N/A N/A N/A 29602905
    122160 6epy:D (2.04) BS06 CA N/A N/A N/A 29602905
    122161 6epy:D (2.04) BS07 CA N/A N/A N/A 29602905
    122162 6epy:D (2.04) BS08 CA N/A N/A N/A 29602905
    122163 6epy:D (2.04) BS09 CA N/A N/A N/A 29602905
    122164 6epy:D (2.04) BS10 CA N/A N/A N/A 29602905
    122165 6epy:D (2.04) BS11 CA N/A N/A N/A 29602905
    122166 6epy:D (2.04) BS12 CA N/A N/A N/A 29602905
    122167 6epz:C (1.8) BS03 MG N/A N/A N/A 29602905
    122168 6epz:D (1.8) BS03 MG N/A N/A N/A 29602905
    122169 6eq0:A (2.45) BS02 CA N/A N/A N/A 29602905
    122170 6eq0:A (2.45) BS03 CA N/A N/A N/A 29602905
    122171 6eq0:A (2.45) BS04 CA N/A N/A N/A 29602905
    122172 6eq0:A (2.45) BS05 CA N/A N/A N/A 29602905
    122173 6eq0:A (2.45) BS06 CA N/A N/A N/A 29602905
    122174 6eq0:B (2.45) BS02 CA N/A N/A N/A 29602905
    122175 6eq0:B (2.45) BS03 CA N/A N/A N/A 29602905
    122176 6eq1:A (2.1) BS05 CA N/A N/A N/A 29602905
    122177 6eq1:B (2.1) BS05 CA N/A N/A N/A 29602905
    122178 6eq1:B (2.1) BS06 CA N/A N/A N/A 29602905
    122179 6eq8:A (2.19) BS02 CA N/A N/A N/A 29602905
    122180 6eq8:A (2.19) BS03 CA N/A N/A N/A 29602905
    122181 6eq8:A (2.19) BS04 CA N/A N/A N/A 29602905
    122182 6eq8:A (2.19) BS05 CA N/A N/A N/A 29602905
    122183 6eq8:B (2.19) BS02 CA N/A N/A N/A 29602905
    122184 6eq8:B (2.19) BS03 CA N/A N/A N/A 29602905
    122185 6eq8:C (2.19) BS02 CA N/A N/A N/A 29602905
    122186 6eq8:C (2.19) BS03 CA N/A N/A N/A 29602905
    122187 6eq8:C (2.19) BS04 CA N/A N/A N/A 29602905
    122188 6eq8:D (2.19) BS02 CA N/A N/A N/A 29602905
    122189 6eql:A (2.38) BS02 MN 2.4.1.186 GO:0016757 ... P46976 30356213
    122190 6eql:B (2.38) BS02 MN 2.4.1.186 GO:0016757 ... P46976 30356213
    122191 6eqs:A (1.32) BS01 ZN 2.3.1.- GO:0036054 ... Q9NXA8 29044784
    122192 6eqs:B (1.32) BS01 ZN 2.3.1.- GO:0036054 ... Q9NXA8 29044784
    122193 6eqs:C (1.32) BS02 ZN 2.3.1.- GO:0036054 ... Q9NXA8 29044784
    122194 6eqs:D (1.32) BS01 ZN 2.3.1.- GO:0036054 ... Q9NXA8 29044784
    122195 6equ:A (1.65) BS01 ZN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 29199489
    122196 6eqv:A (1.895) BS02 CA 3.4.21.75 GO:0004252 ... P09958 29314830
    122197 6eqv:A (1.895) BS03 CA 3.4.21.75 GO:0004252 ... P09958 29314830
    122198 6eqv:A (1.895) BS04 CA 3.4.21.75 GO:0004252 ... P09958 29314830
    122199 6eqw:A (1.994) BS02 CA 3.4.21.75 GO:0004252 ... P09958 29314830
    122200 6eqw:A (1.994) BS03 CA 3.4.21.75 GO:0004252 ... P09958 29314830
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218