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BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    105601 5pmq:A (1.46) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105602 5pmr:A (1.51) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105603 5pmr:A (1.51) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105604 5pms:A (1.24) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105605 5pms:A (1.24) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105606 5pmt:A (1.22) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105607 5pmt:A (1.22) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105608 5pmu:A (1.48) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105609 5pmu:A (1.48) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105610 5pmv:A (1.34) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105611 5pmv:A (1.34) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105612 5pmw:A (1.19) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105613 5pmw:A (1.19) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105614 5pmx:A (1.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105615 5pmx:A (1.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105616 5pmy:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105617 5pmy:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105618 5pmz:A (1.15) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105619 5pmz:A (1.15) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105620 5pn0:A (1.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105621 5pn0:A (1.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105622 5pn1:A (1.41) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105623 5pn1:A (1.41) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105624 5pn2:A (1.41) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105625 5pn2:A (1.41) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105626 5pn3:A (1.6) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105627 5pn3:A (1.6) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105628 5pn4:A (1.37) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105629 5pn4:A (1.37) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105630 5pn5:A (1.3) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105631 5pn5:A (1.3) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105632 5pn6:A (1.42) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105633 5pn6:A (1.42) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105634 5pn7:A (1.25) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105635 5pn7:A (1.25) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105636 5pn8:A (1.34) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105637 5pn8:A (1.34) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105638 5pn9:A (1.48) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105639 5pn9:A (1.48) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105640 5pna:A (1.78) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105641 5pna:A (1.78) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105642 5pnb:A (1.23) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105643 5pnb:A (1.23) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105644 5pnc:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105645 5pnc:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105646 5pnd:A (1.49) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105647 5pnd:A (1.49) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105648 5pne:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105649 5pne:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105650 5pnf:A (1.24) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105651 5pnf:A (1.24) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105652 5png:A (1.38) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105653 5png:A (1.38) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105654 5pnh:A (1.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105655 5pnh:A (1.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105656 5pni:A (1.45) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105657 5pni:A (1.45) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105658 5pnj:A (1.4) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105659 5pnj:A (1.4) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105660 5pnk:A (1.27) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105661 5pnk:A (1.27) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105662 5pnl:A (1.44) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105663 5pnl:A (1.44) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105664 5pnm:A (1.25) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105665 5pnm:A (1.25) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105666 5pnn:A (1.21) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105667 5pnn:A (1.21) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105668 5pno:A (1.55) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105669 5pno:A (1.55) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105670 5pnp:A (1.47) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105671 5pnp:A (1.47) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105672 5pnq:A (1.47) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105673 5pnq:A (1.47) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105674 5pnr:A (1.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105675 5pnr:A (1.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105676 5pns:A (1.36) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105677 5pns:A (1.36) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105678 5pnu:A (1.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105679 5pnu:A (1.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105680 5pnv:A (1.6) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105681 5pnv:A (1.6) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105682 5pnw:A (1.4) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105683 5pnw:A (1.4) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105684 5prc:L (2.35) BS05 FE2 ? GO:0009772 ... P06009 10024457
    105685 5prc:M (2.35) BS03 FE2 ? GO:0009772 ... P06010 10024457
    105686 5ptp:A (1.34) BS01 CA 3.4.21.4 GO:0004175 ... P00760 1557349
    105687 5pwc:A (1.549) BS01 ZN ? N/A H0Y4R8 28436492
    105688 5pwc:A (1.549) BS02 ZN ? N/A H0Y4R8 28436492
    105689 5pwc:B (1.549) BS01 ZN ? N/A H0Y4R8 28436492
    105690 5pwc:B (1.549) BS02 ZN ? N/A H0Y4R8 28436492
    105691 5pwd:A (1.569) BS01 ZN ? N/A H0Y4R8 28436492
    105692 5pwd:A (1.569) BS02 ZN ? N/A H0Y4R8 28436492
    105693 5pwd:B (1.569) BS01 ZN ? N/A H0Y4R8 28436492
    105694 5pwd:B (1.569) BS02 ZN ? N/A H0Y4R8 28436492
    105695 5pwe:A (1.69) BS01 ZN ? N/A P23497 28436492
    105696 5pwe:A (1.69) BS02 ZN ? N/A P23497 28436492
    105697 5pwe:B (1.69) BS01 ZN ? N/A P23497 28436492
    105698 5pwe:B (1.69) BS02 ZN ? N/A P23497 28436492
    105699 5pwf:A (1.48) BS01 ZN ? N/A P23497 28436492
    105700 5pwf:A (1.48) BS02 ZN ? N/A P23497 28436492
    105701 5pwf:A (1.48) BS03 ZN ? N/A P23497 28436492
    105702 5pwf:B (1.48) BS01 ZN ? N/A P23497 28436492
    105703 5pwf:B (1.48) BS02 ZN ? N/A P23497 28436492
    105704 5pwg:A (1.46) BS01 ZN ? N/A P23497 28436492
    105705 5pwg:A (1.46) BS02 ZN ? N/A P23497 28436492
    105706 5pwg:A (1.46) BS03 ZN ? N/A P23497 28436492
    105707 5pwg:B (1.46) BS01 ZN ? N/A P23497 28436492
    105708 5pwg:B (1.46) BS02 ZN ? N/A P23497 28436492
    105709 5pwh:A (1.5) BS01 ZN ? N/A P23497 28436492
    105710 5pwh:A (1.5) BS02 ZN ? N/A P23497 28436492
    105711 5pwh:B (1.5) BS01 ZN ? N/A P23497 28436492
    105712 5pwh:B (1.5) BS02 ZN ? N/A P23497 28436492
    105713 5pwi:A (1.62) BS01 ZN ? N/A P23497 28436492
    105714 5pwi:A (1.62) BS02 ZN ? N/A P23497 28436492
    105715 5pwi:B (1.62) BS01 ZN ? N/A P23497 28436492
    105716 5pwi:B (1.62) BS02 ZN ? N/A P23497 28436492
    105717 5pwj:A (1.89) BS01 ZN ? N/A P23497 28436492
    105718 5pwj:A (1.89) BS02 ZN ? N/A P23497 28436492
    105719 5pwj:B (1.89) BS01 ZN ? N/A P23497 28436492
    105720 5pwj:B (1.89) BS02 ZN ? N/A P23497 28436492
    105721 5pwk:A (1.62) BS01 ZN ? N/A P23497 28436492
    105722 5pwk:A (1.62) BS02 ZN ? N/A P23497 28436492
    105723 5pwk:B (1.62) BS01 ZN ? N/A P23497 28436492
    105724 5pwk:B (1.62) BS02 ZN ? N/A P23497 28436492
    105725 5pwl:A (1.83) BS01 ZN ? N/A P23497 28436492
    105726 5pwl:A (1.83) BS02 ZN ? N/A P23497 28436492
    105727 5pwl:B (1.83) BS01 ZN ? N/A P23497 28436492
    105728 5pwl:B (1.83) BS02 ZN ? N/A P23497 28436492
    105729 5pwm:A (1.54) BS01 ZN ? N/A P23497 28436492
    105730 5pwm:A (1.54) BS02 ZN ? N/A P23497 28436492
    105731 5pwm:B (1.54) BS01 ZN ? N/A P23497 28436492
    105732 5pwm:B (1.54) BS02 ZN ? N/A P23497 28436492
    105733 5pwn:A (1.64) BS01 ZN ? N/A P23497 28436492
    105734 5pwn:A (1.64) BS02 ZN ? N/A P23497 28436492
    105735 5pwn:B (1.64) BS01 ZN ? N/A P23497 28436492
    105736 5pwn:B (1.64) BS02 ZN ? N/A P23497 28436492
    105737 5pwo:A (1.85) BS01 ZN ? N/A P23497 28436492
    105738 5pwo:A (1.85) BS02 ZN ? N/A P23497 28436492
    105739 5pwo:B (1.85) BS01 ZN ? N/A P23497 28436492
    105740 5pwo:B (1.85) BS02 ZN ? N/A P23497 28436492
    105741 5pwp:A (1.51) BS01 ZN ? N/A P23497 28436492
    105742 5pwp:A (1.51) BS02 ZN ? N/A P23497 28436492
    105743 5pwp:A (1.51) BS03 ZN ? N/A P23497 28436492
    105744 5pwp:B (1.51) BS01 ZN ? N/A P23497 28436492
    105745 5pwp:B (1.51) BS02 ZN ? N/A P23497 28436492
    105746 5pwq:A (1.52) BS01 ZN ? N/A P23497 28436492
    105747 5pwq:A (1.52) BS02 ZN ? N/A P23497 28436492
    105748 5pwq:B (1.52) BS01 ZN ? N/A P23497 28436492
    105749 5pwq:B (1.52) BS02 ZN ? N/A P23497 28436492
    105750 5pwr:A (1.46) BS01 ZN ? N/A P23497 28436492
    105751 5pwr:A (1.46) BS02 ZN ? N/A P23497 28436492
    105752 5pwr:B (1.46) BS01 ZN ? N/A P23497 28436492
    105753 5pwr:B (1.46) BS02 ZN ? N/A P23497 28436492
    105754 5pws:A (1.4) BS01 ZN ? N/A P23497 28436492
    105755 5pws:A (1.4) BS02 ZN ? N/A P23497 28436492
    105756 5pws:A (1.4) BS03 ZN ? N/A P23497 28436492
    105757 5pws:B (1.4) BS01 ZN ? N/A P23497 28436492
    105758 5pws:B (1.4) BS02 ZN ? N/A P23497 28436492
    105759 5pwt:A (1.58) BS01 ZN ? N/A P23497 28436492
    105760 5pwt:A (1.58) BS02 ZN ? N/A P23497 28436492
    105761 5pwt:B (1.58) BS01 ZN ? N/A P23497 28436492
    105762 5pwt:B (1.58) BS02 ZN ? N/A P23497 28436492
    105763 5pwu:A (1.44) BS01 ZN ? N/A P23497 28436492
    105764 5pwu:A (1.44) BS02 ZN ? N/A P23497 28436492
    105765 5pwu:A (1.44) BS03 ZN ? N/A P23497 28436492
    105766 5pwu:B (1.44) BS01 ZN ? N/A P23497 28436492
    105767 5pwu:B (1.44) BS02 ZN ? N/A P23497 28436492
    105768 5pwv:A (1.58) BS01 ZN ? N/A P23497 28436492
    105769 5pwv:A (1.58) BS02 ZN ? N/A P23497 28436492
    105770 5pwv:B (1.58) BS01 ZN ? N/A P23497 28436492
    105771 5pwv:B (1.58) BS02 ZN ? N/A P23497 28436492
    105772 5pww:A (1.59) BS01 ZN ? N/A P23497 28436492
    105773 5pww:A (1.59) BS02 ZN ? N/A P23497 28436492
    105774 5pww:B (1.59) BS01 ZN ? N/A P23497 28436492
    105775 5pww:B (1.59) BS02 ZN ? N/A P23497 28436492
    105776 5pwx:A (1.69) BS01 ZN ? N/A P23497 28436492
    105777 5pwx:A (1.69) BS02 ZN ? N/A P23497 28436492
    105778 5pwx:B (1.69) BS01 ZN ? N/A P23497 28436492
    105779 5pwx:B (1.69) BS02 ZN ? N/A P23497 28436492
    105780 5pwy:A (1.98) BS01 ZN ? N/A P23497 28436492
    105781 5pwy:A (1.98) BS02 ZN ? N/A P23497 28436492
    105782 5pwy:B (1.98) BS01 ZN ? N/A P23497 28436492
    105783 5pwy:B (1.98) BS02 ZN ? N/A P23497 28436492
    105784 5pwz:A (1.62) BS01 ZN ? N/A P23497 28436492
    105785 5pwz:A (1.62) BS02 ZN ? N/A P23497 28436492
    105786 5pwz:B (1.62) BS01 ZN ? N/A P23497 28436492
    105787 5pwz:B (1.62) BS02 ZN ? N/A P23497 28436492
    105788 5px0:A (1.55) BS01 ZN ? N/A P23497 28436492
    105789 5px0:A (1.55) BS02 ZN ? N/A P23497 28436492
    105790 5px0:B (1.55) BS01 ZN ? N/A P23497 28436492
    105791 5px0:B (1.55) BS02 ZN ? N/A P23497 28436492
    105792 5px1:A (1.55) BS01 ZN ? N/A P23497 28436492
    105793 5px1:A (1.55) BS02 ZN ? N/A P23497 28436492
    105794 5px1:A (1.55) BS03 ZN ? N/A P23497 28436492
    105795 5px1:B (1.55) BS01 ZN ? N/A P23497 28436492
    105796 5px1:B (1.55) BS02 ZN ? N/A P23497 28436492
    105797 5px2:A (1.43) BS01 ZN ? N/A P23497 28436492
    105798 5px2:A (1.43) BS02 ZN ? N/A P23497 28436492
    105799 5px2:A (1.43) BS03 ZN ? N/A P23497 28436492
    105800 5px2:B (1.43) BS01 ZN ? N/A P23497 28436492

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218