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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 197122 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    105401 5pjy:A (1.34) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105402 5pjz:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105403 5pjz:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105404 5pk0:A (1.28) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105405 5pk0:A (1.28) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105406 5pk1:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105407 5pk1:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105408 5pk2:A (1.42) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105409 5pk2:A (1.42) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105410 5pk3:A (1.42) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105411 5pk3:A (1.42) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105412 5pk4:A (1.72) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105413 5pk4:A (1.72) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105414 5pk5:A (1.39) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105415 5pk5:A (1.39) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105416 5pk6:A (2.38) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105417 5pk6:A (2.38) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105418 5pk7:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105419 5pk7:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105420 5pk8:A (1.44) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105421 5pk8:A (1.44) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105422 5pk9:A (1.34) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105423 5pk9:A (1.34) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105424 5pka:A (1.71) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105425 5pka:A (1.71) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105426 5pkb:A (1.4) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105427 5pkb:A (1.4) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105428 5pkc:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105429 5pkc:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105430 5pkd:A (1.55) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105431 5pkd:A (1.55) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105432 5pke:A (1.44) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105433 5pke:A (1.44) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105434 5pkf:A (1.34) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105435 5pkf:A (1.34) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105436 5pkg:A (1.54) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105437 5pkg:A (1.54) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105438 5pkh:A (1.19) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105439 5pkh:A (1.19) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105440 5pki:A (1.19) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105441 5pki:A (1.19) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105442 5pkj:A (1.22) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105443 5pkj:A (1.22) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105444 5pkk:A (1.5) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105445 5pkk:A (1.5) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105446 5pkl:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105447 5pkl:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105448 5pkm:A (1.37) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105449 5pkm:A (1.37) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105450 5pkn:A (1.3) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105451 5pkn:A (1.3) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105452 5pko:A (2.38) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105453 5pko:A (2.38) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105454 5pkp:A (1.3) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105455 5pkp:A (1.3) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105456 5pkq:A (1.28) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105457 5pkq:A (1.28) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105458 5pkr:A (1.31) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105459 5pkr:A (1.31) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105460 5pks:A (1.5) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105461 5pks:A (1.5) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105462 5pkt:A (1.5) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105463 5pkt:A (1.5) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105464 5pku:A (1.47) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105465 5pku:A (1.47) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105466 5pkv:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105467 5pkv:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105468 5pkw:A (1.35) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105469 5pkw:A (1.35) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105470 5pkx:A (1.45) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105471 5pkx:A (1.45) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105472 5pky:A (1.25) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105473 5pky:A (1.25) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105474 5pkz:A (1.5) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105475 5pkz:A (1.5) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105476 5pl0:A (1.27) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105477 5pl0:A (1.27) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105478 5pl1:A (1.42) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105479 5pl1:A (1.42) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105480 5pl2:A (1.34) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105481 5pl2:A (1.34) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105482 5pl3:A (1.27) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105483 5pl3:A (1.27) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105484 5pl4:A (1.21) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105485 5pl4:A (1.21) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105486 5pl5:A (1.57) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105487 5pl5:A (1.57) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105488 5pl6:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105489 5pl6:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105490 5pl7:A (1.3) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105491 5pl7:A (1.3) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105492 5pl8:A (1.54) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105493 5pl8:A (1.54) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105494 5pl9:A (1.65) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105495 5pl9:A (1.65) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105496 5pla:A (1.37) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105497 5pla:A (1.37) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105498 5plb:A (1.49) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105499 5plb:A (1.49) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105500 5plc:A (1.49) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105501 5plc:A (1.49) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105502 5pld:A (1.46) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105503 5pld:A (1.46) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105504 5ple:A (1.45) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105505 5ple:A (1.45) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105506 5plf:A (1.33) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105507 5plf:A (1.33) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105508 5plg:A (1.31) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105509 5plg:A (1.31) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105510 5plh:A (1.46) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105511 5plh:A (1.46) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105512 5pli:A (1.39) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105513 5pli:A (1.39) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105514 5plj:A (1.49) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105515 5plj:A (1.49) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105516 5plk:A (1.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105517 5plk:A (1.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105518 5pll:A (1.28) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105519 5pll:A (1.28) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105520 5plm:A (1.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105521 5plm:A (1.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105522 5pln:A (1.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105523 5pln:A (1.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105524 5plo:A (1.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105525 5plo:A (1.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105526 5plp:A (1.46) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105527 5plp:A (1.46) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105528 5plq:A (1.36) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105529 5plq:A (1.36) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105530 5plr:A (1.53) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105531 5plr:A (1.53) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105532 5pls:A (1.7) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105533 5pls:A (1.7) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105534 5plt:A (1.53) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105535 5plt:A (1.53) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105536 5plu:A (1.47) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105537 5plu:A (1.47) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105538 5plv:A (1.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105539 5plv:A (1.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105540 5plw:A (1.31) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105541 5plw:A (1.31) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105542 5plx:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105543 5plx:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105544 5ply:A (1.38) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105545 5ply:A (1.38) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105546 5plz:A (1.71) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105547 5plz:A (1.71) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105548 5pm0:A (2.14) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105549 5pm0:A (2.14) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105550 5pm1:A (1.54) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105551 5pm1:A (1.54) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105552 5pm2:A (1.52) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105553 5pm2:A (1.52) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105554 5pm3:A (1.46) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105555 5pm3:A (1.46) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105556 5pm4:A (1.44) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105557 5pm4:A (1.44) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105558 5pm5:A (1.76) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105559 5pm5:A (1.76) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105560 5pm6:A (1.78) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105561 5pm6:A (1.78) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105562 5pm7:A (1.43) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105563 5pm7:A (1.43) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105564 5pm8:A (1.54) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105565 5pm8:A (1.54) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105566 5pm9:A (1.5) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105567 5pm9:A (1.5) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105568 5pma:A (1.29) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105569 5pma:A (1.29) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105570 5pmb:A (1.63) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105571 5pmb:A (1.63) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105572 5pmc:A (1.58) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105573 5pmc:A (1.58) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105574 5pmd:A (1.63) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105575 5pmd:A (1.63) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105576 5pme:A (1.39) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105577 5pme:A (1.39) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105578 5pmf:A (1.36) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105579 5pmf:A (1.36) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105580 5pmg:A (1.51) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105581 5pmg:A (1.51) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105582 5pmh:A (1.52) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105583 5pmh:A (1.52) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105584 5pmi:A (1.71) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105585 5pmi:A (1.71) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105586 5pmj:A (1.37) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105587 5pmj:A (1.37) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105588 5pmk:A (1.44) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105589 5pmk:A (1.44) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105590 5pml:A (1.58) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105591 5pml:A (1.58) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105592 5pmm:A (1.39) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105593 5pmm:A (1.39) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105594 5pmn:A (1.72) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105595 5pmn:A (1.72) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105596 5pmo:A (1.53) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105597 5pmo:A (1.53) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105598 5pmp:A (1.55) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    105599 5pmp:A (1.55) BS02 MG 1.14.11.66 N/A Q6B0I6 28436492
    105600 5pmq:A (1.46) BS01 ZN 1.14.11.66 N/A Q6B0I6 28436492
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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