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BioLiP
Download all results in tab-seperated text for 34 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7m18:A (3.38) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    2 7m18:B (3.38) BS01 YNP ? GO:0000226 ... Q13509 34461087
    3 7m18:C (3.38) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    4 7m18:D (3.38) BS01 YNP ? GO:0000226 ... Q13509 34461087
    5 7m18:E (3.38) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    6 7m18:F (3.38) BS01 YNP ? GO:0000226 ... Q13509 34461087
    7 7m18:G (3.38) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    8 7m18:H (3.38) BS01 YNP ? GO:0000226 ... Q13509 34461087
    9 7m18:I (3.38) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    10 7m18:J (3.38) BS01 YNP ? GO:0000226 ... Q13509 34461087
    11 7m18:K (3.38) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    12 7m18:L (3.38) BS01 YNP ? GO:0000226 ... Q13509 34461087
    13 7m18:M (3.38) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    14 7m18:N (3.38) BS01 YNP ? GO:0000226 ... Q13509 34461087
    15 7m18:O (3.38) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    16 7m18:P (3.38) BS01 YNP ? GO:0000226 ... Q13509 34461087
    17 7m20:A (3.84) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    18 7m20:B (3.84) BS02 YNP ? GO:0000226 ... Q13509 34461087
    19 7m20:C (3.84) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    20 7m20:D (3.84) BS02 YNP ? GO:0000226 ... Q13509 34461087
    21 7m20:E (3.84) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    22 7m20:F (3.84) BS02 YNP ? GO:0000226 ... Q13509 34461087
    23 7m20:G (3.84) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    24 7m20:H (3.84) BS02 YNP ? GO:0000226 ... Q13509 34461087
    25 7m20:I (3.84) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    26 7m20:J (3.84) BS02 YNP ? GO:0000226 ... Q13509 34461087
    27 7m20:K (3.84) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    28 7m20:L (3.84) BS02 YNP ? GO:0000226 ... Q13509 34461087
    29 7m20:M (3.84) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    30 7m20:N (3.84) BS02 YNP ? GO:0000226 ... Q13509 34461087
    31 7m20:O (3.84) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    32 7m20:P (3.84) BS02 YNP ? GO:0000226 ... Q13509 34461087
    33 7m20:Q (3.84) BS01 YNP 3.6.5.- GO:0000226 ... P68363 34461087
    34 7m20:R (3.84) BS02 YNP ? GO:0000226 ... Q13509 34461087
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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