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BioLiP
Download all results in tab-seperated text for 50 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8fai:A (3.0) BS01 XL0 ? N/A P17792 36870333
    2 8fai:A (3.0) BS02 XL0 ? N/A P17792 36870333
    3 8fai:A (3.0) BS03 XL0 ? N/A P17792 36870333
    4 8fai:B (3.0) BS01 XL0 ? N/A P17792 36870333
    5 8fai:B (3.0) BS02 XL0 ? N/A P17792 36870333
    6 8fai:B (3.0) BS03 XL0 ? N/A P17792 36870333
    7 8fai:C (3.0) BS01 XL0 ? N/A P17792 36870333
    8 8fai:C (3.0) BS02 XL0 ? N/A P17792 36870333
    9 8fai:C (3.0) BS03 XL0 ? N/A P17792 36870333
    10 8fai:D (3.0) BS01 XL0 ? N/A P17792 36870333
    11 8fai:D (3.0) BS02 XL0 ? N/A P17792 36870333
    12 8fai:D (3.0) BS03 XL0 ? N/A P17792 36870333
    13 8fai:E (3.0) BS01 XL0 ? N/A P17792 36870333
    14 8fai:E (3.0) BS02 XL0 ? N/A P17792 36870333
    15 8fai:E (3.0) BS03 XL0 ? N/A P17792 36870333
    16 8fai:F (3.0) BS01 XL0 ? N/A P17792 36870333
    17 8fai:F (3.0) BS02 XL0 ? N/A P17792 36870333
    18 8fai:F (3.0) BS03 XL0 ? N/A P17792 36870333
    19 8fai:F (3.0) BS04 XL0 ? N/A P17792 36870333
    20 8fai:G (3.0) BS01 XL0 ? N/A P17792 36870333
    21 8fai:G (3.0) BS02 XL0 ? N/A P17792 36870333
    22 8fai:G (3.0) BS03 XL0 ? N/A P17792 36870333
    23 8fai:G (3.0) BS04 XL0 ? N/A P17792 36870333
    24 8fai:H (3.0) BS01 XL0 ? N/A P17792 36870333
    25 8fai:H (3.0) BS02 XL0 ? N/A P17792 36870333
    26 8fai:H (3.0) BS03 XL0 ? N/A P17792 36870333
    27 8fai:H (3.0) BS04 XL0 ? N/A P17792 36870333
    28 8fai:I (3.0) BS01 XL0 ? N/A P17792 36870333
    29 8fai:I (3.0) BS02 XL0 ? N/A P17792 36870333
    30 8fai:I (3.0) BS03 XL0 ? N/A P17792 36870333
    31 8fai:I (3.0) BS04 XL0 ? N/A P17792 36870333
    32 8fai:J (3.0) BS01 XL0 ? N/A P17792 36870333
    33 8fai:J (3.0) BS02 XL0 ? N/A P17792 36870333
    34 8fai:J (3.0) BS03 XL0 ? N/A P17792 36870333
    35 8fai:J (3.0) BS04 XL0 ? N/A P17792 36870333
    36 8fai:K (3.0) BS01 XL0 ? N/A P17792 36870333
    37 8fai:K (3.0) BS02 XL0 ? N/A P17792 36870333
    38 8fai:K (3.0) BS03 XL0 ? N/A P17792 36870333
    39 8fai:L (3.0) BS01 XL0 ? N/A P17792 36870333
    40 8fai:L (3.0) BS02 XL0 ? N/A P17792 36870333
    41 8fai:L (3.0) BS03 XL0 ? N/A P17792 36870333
    42 8fai:M (3.0) BS01 XL0 ? N/A P17792 36870333
    43 8fai:M (3.0) BS02 XL0 ? N/A P17792 36870333
    44 8fai:M (3.0) BS03 XL0 ? N/A P17792 36870333
    45 8fai:N (3.0) BS01 XL0 ? N/A P17792 36870333
    46 8fai:N (3.0) BS02 XL0 ? N/A P17792 36870333
    47 8fai:N (3.0) BS03 XL0 ? N/A P17792 36870333
    48 8fai:O (3.0) BS01 XL0 ? N/A P17792 36870333
    49 8fai:O (3.0) BS02 XL0 ? N/A P17792 36870333
    50 8fai:O (3.0) BS03 XL0 ? N/A P17792 36870333
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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