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BioLiP
Download all results in tab-seperated text for 17 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7uxk:A (2.63) BS02 WHL 2.7.11.22 GO:0000082 ... P24941 36534810
    2 8ehz:B (2.06) BS02 WHL 2.3.2.27 N/A Q9UNE7 37914719
    3 8ei0:A (1.47) BS02 WHL 2.3.2.27 N/A Q9UNE7 37914719
    4 8ei3:C (3.49) BS02 WHL ? N/A P40337 37914719
    5 8ei4:A (2.43) BS02 WHL 2.3.2.26 GO:0004842 ... Q9H0M0 37914719
    6 8ei5:A (2.6) BS02 WHL 2.3.2.26 GO:0004842 ... O00308 37914719
    7 8ei5:B (2.6) BS02 WHL 2.3.2.26 GO:0004842 ... O00308 37914719
    8 8ei5:C (2.6) BS03 WHL 2.3.2.26 GO:0004842 ... O00308 37914719
    9 8ei5:D (2.6) BS03 WHL 2.3.2.26 GO:0004842 ... O00308 37914719
    10 8ei9:A (3.9) BS02 WHL ? GO:0007155 ... P35222 37914719
    11 8eia:A (3.6) BS02 WHL ? GO:0007155 ... P35222 37914719
    12 8eib:A (3.76) BS02 WHL ? GO:0007155 ... P35222 37914719
    13 8eic:A (2.62) BS02 WHL ? GO:0007155 ... P35222 37914719
    14 8f14:A (1.69) BS02 WHL 2.3.2.27 N/A Q9UNE7 N/A
    15 8f15:A (1.73) BS03 WHL 2.3.2.27 N/A Q9UNE7 N/A
    16 8f15:B (1.73) BS02 WHL 2.3.2.27 N/A Q9UNE7 N/A
    17 8f15:C (1.73) BS02 WHL 2.3.2.27 N/A Q9UNE7 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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