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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 1009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    601 7vot:5 (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    602 7vot:5 (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    603 7vot:6 (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    604 7vot:6 (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    605 7vot:7 (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    606 7vot:7 (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    607 7vot:8 (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    608 7vot:9 (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    609 7vot:9 (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    610 7vot:9 (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    611 7vot:A (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    612 7vot:A (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    613 7vot:A (2.9) BS06 SPO ? GO:0005886 ... Q3J1A4 35418573
    614 7vot:B (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    615 7vot:B (2.9) BS04 SPO ? GO:0005886 ... Q3J1A3 35418573
    616 7vot:C (2.9) BS01 SPO ? GO:0005886 ... Q3J1A3 35418573
    617 7vot:C (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    618 7vot:D (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    619 7vot:D (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    620 7vot:D (2.9) BS06 SPO ? GO:0005886 ... Q3J1A4 35418573
    621 7vot:E (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    622 7vot:E (2.9) BS04 SPO ? GO:0005886 ... Q3J1A3 35418573
    623 7vot:F (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    624 7vot:F (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    625 7vot:F (2.9) BS04 SPO ? GO:0005886 ... Q3J1A4 35418573
    626 7vot:F (2.9) BS07 SPO ? GO:0005886 ... Q3J1A4 35418573
    627 7vot:G (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    628 7vot:G (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    629 7vot:I (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    630 7vot:I (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    631 7vot:I (2.9) BS06 SPO ? GO:0005886 ... Q3J1A4 35418573
    632 7vot:J (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    633 7vot:J (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    634 7vot:K (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    635 7vot:K (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    636 7vot:K (2.9) BS06 SPO ? GO:0005886 ... Q3J1A4 35418573
    637 7vot:M (2.9) BS09 SPO ? GO:0009772 ... Q3J1A6 35418573
    638 7vot:N (2.9) BS01 SPO ? GO:0005886 ... Q3J1A3 35418573
    639 7vot:N (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    640 7vot:O (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    641 7vot:O (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    642 7vot:P (2.9) BS01 SPO ? GO:0005886 ... Q3J1A3 35418573
    643 7vot:P (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    644 7vot:Q (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    645 7vot:Q (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    646 7vot:R (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    647 7vot:R (2.9) BS04 SPO ? GO:0005886 ... Q3J1A3 35418573
    648 7vot:S (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    649 7vot:S (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    650 7vot:S (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    651 7vot:T (2.9) BS01 SPO ? GO:0005886 ... Q3J1A3 35418573
    652 7vot:T (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    653 7vot:U (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    654 7vot:U (2.9) BS04 SPO ? GO:0005886 ... Q3J1A4 35418573
    655 7vot:V (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    656 7vot:V (2.9) BS04 SPO ? GO:0005886 ... Q3J1A3 35418573
    657 7vot:V (2.9) BS05 SPO ? GO:0005886 ... Q3J1A3 35418573
    658 7vot:W (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    659 7vot:W (2.9) BS04 SPO ? GO:0005886 ... Q3J1A4 35418573
    660 7vot:X (2.9) BS01 SPO ? GO:0005886 ... P13402 35418573
    661 7vot:Z (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    662 7vot:Z (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    663 7vot:a (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    664 7vot:a (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    665 7vot:a (2.9) BS06 SPO ? GO:0005886 ... Q3J1A4 35418573
    666 7vot:b (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    667 7vot:b (2.9) BS04 SPO ? GO:0005886 ... Q3J1A3 35418573
    668 7vot:b0 (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    669 7vot:b0 (2.9) BS05 SPO ? GO:0005886 ... Q3J1A3 35418573
    670 7vot:b1 (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    671 7vot:b8 (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    672 7vot:b9 (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    673 7vot:b9 (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    674 7vot:b9 (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    675 7vot:c (2.9) BS01 SPO ? GO:0005886 ... Q3J1A3 35418573
    676 7vot:c (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    677 7vot:d (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    678 7vot:d (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    679 7vot:d (2.9) BS06 SPO ? GO:0005886 ... Q3J1A4 35418573
    680 7vot:e (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    681 7vot:e (2.9) BS04 SPO ? GO:0005886 ... Q3J1A3 35418573
    682 7vot:f (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    683 7vot:f (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    684 7vot:f (2.9) BS04 SPO ? GO:0005886 ... Q3J1A4 35418573
    685 7vot:f (2.9) BS07 SPO ? GO:0005886 ... Q3J1A4 35418573
    686 7vot:g (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    687 7vot:g (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    688 7vot:i (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    689 7vot:i (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    690 7vot:i (2.9) BS06 SPO ? GO:0005886 ... Q3J1A4 35418573
    691 7vot:j (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    692 7vot:j (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    693 7vot:k (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    694 7vot:k (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    695 7vot:k (2.9) BS06 SPO ? GO:0005886 ... Q3J1A4 35418573
    696 7vot:m (2.9) BS09 SPO ? GO:0009772 ... Q3J1A6 35418573
    697 7vot:n (2.9) BS01 SPO ? GO:0005886 ... Q3J1A3 35418573
    698 7vot:n (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    699 7vot:o (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    700 7vot:o (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    701 7vot:p (2.9) BS01 SPO ? GO:0005886 ... Q3J1A3 35418573
    702 7vot:p (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    703 7vot:q (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    704 7vot:q (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    705 7vot:r (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    706 7vot:r (2.9) BS04 SPO ? GO:0005886 ... Q3J1A3 35418573
    707 7vot:s (2.9) BS01 SPO ? GO:0005886 ... Q3J1A4 35418573
    708 7vot:s (2.9) BS03 SPO ? GO:0005886 ... Q3J1A4 35418573
    709 7vot:s (2.9) BS05 SPO ? GO:0005886 ... Q3J1A4 35418573
    710 7vot:t (2.9) BS01 SPO ? GO:0005886 ... Q3J1A3 35418573
    711 7vot:t (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    712 7vot:u (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    713 7vot:u (2.9) BS04 SPO ? GO:0005886 ... Q3J1A4 35418573
    714 7vot:v (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    715 7vot:v (2.9) BS04 SPO ? GO:0005886 ... Q3J1A3 35418573
    716 7vot:v (2.9) BS05 SPO ? GO:0005886 ... Q3J1A3 35418573
    717 7vot:w (2.9) BS02 SPO ? GO:0005886 ... Q3J1A4 35418573
    718 7vot:w (2.9) BS04 SPO ? GO:0005886 ... Q3J1A4 35418573
    719 7vot:x (2.9) BS01 SPO ? GO:0005886 ... P13402 35418573
    720 7vot:z (2.9) BS02 SPO ? GO:0005886 ... Q3J1A3 35418573
    721 7vot:z (2.9) BS03 SPO ? GO:0005886 ... Q3J1A3 35418573
    722 7vy2:01 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    723 7vy2:01 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    724 7vy2:01 (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    725 7vy2:01 (2.75) BS05 SPO N/A GO:0016020 ... N/A 35393413
    726 7vy2:02 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    727 7vy2:02 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    728 7vy2:03 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    729 7vy2:03 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    730 7vy2:03 (2.75) BS06 SPO N/A GO:0016020 ... N/A 35393413
    731 7vy2:04 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    732 7vy2:04 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    733 7vy2:05 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    734 7vy2:05 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    735 7vy2:05 (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    736 7vy2:06 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    737 7vy2:06 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    738 7vy2:07 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    739 7vy2:08 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    740 7vy2:1 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    741 7vy2:1 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    742 7vy2:1 (2.75) BS05 SPO N/A GO:0016020 ... N/A 35393413
    743 7vy2:2 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    744 7vy2:2 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    745 7vy2:3 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    746 7vy2:3 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    747 7vy2:3 (2.75) BS05 SPO N/A GO:0016020 ... N/A 35393413
    748 7vy2:4 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    749 7vy2:4 (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    750 7vy2:5 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    751 7vy2:5 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    752 7vy2:5 (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    753 7vy2:6 (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    754 7vy2:8 (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    755 7vy2:A (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    756 7vy2:A (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    757 7vy2:B (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    758 7vy2:D (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    759 7vy2:D (2.75) BS06 SPO N/A GO:0016020 ... N/A 35393413
    760 7vy2:E (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    761 7vy2:E (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    762 7vy2:F (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    763 7vy2:F (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    764 7vy2:F (2.75) BS06 SPO N/A GO:0016020 ... N/A 35393413
    765 7vy2:G (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    766 7vy2:G (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    767 7vy2:I (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    768 7vy2:I (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    769 7vy2:I (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    770 7vy2:I (2.75) BS05 SPO N/A GO:0016020 ... N/A 35393413
    771 7vy2:J (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    772 7vy2:J (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    773 7vy2:K (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    774 7vy2:K (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    775 7vy2:K (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    776 7vy2:M (2.75) BS09 SPO N/A GO:0009772 ... N/A 35393413
    777 7vy2:N (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    778 7vy2:N (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    779 7vy2:O (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    780 7vy2:O (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    781 7vy2:P (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    782 7vy2:P (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    783 7vy2:Q (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    784 7vy2:Q (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    785 7vy2:R (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    786 7vy2:R (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    787 7vy2:S (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    788 7vy2:S (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    789 7vy2:S (2.75) BS04 SPO N/A GO:0016020 ... N/A 35393413
    790 7vy2:T (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    791 7vy2:V (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    792 7vy2:V (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    793 7vy2:W (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    794 7vy2:W (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    795 7vy2:X (2.75) BS01 SPO N/A N/A N/A 35393413
    796 7vy2:Y (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    797 7vy2:Y (2.75) BS02 SPO N/A GO:0016020 ... N/A 35393413
    798 7vy2:Y (2.75) BS06 SPO N/A GO:0016020 ... N/A 35393413
    799 7vy2:Z (2.75) BS01 SPO N/A GO:0016020 ... N/A 35393413
    800 7vy2:Z (2.75) BS03 SPO N/A GO:0016020 ... N/A 35393413
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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