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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 16739 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    12201 7y7a:C2 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12202 7y7a:C2 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12203 7y7a:C2 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12204 7y7a:C2 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12205 7y7a:C3 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12206 7y7a:C3 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12207 7y7a:C3 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12208 7y7a:C3 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12209 7y7a:C5 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12210 7y7a:C5 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12211 7y7a:C5 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12212 7y7a:C5 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12213 7y7a:C6 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12214 7y7a:C6 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12215 7y7a:C6 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12216 7y7a:C8 (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12217 7y7a:C8 (4.3) BS02 PEB ? GO:0009507 ... P37207 36922595
    12218 7y7a:CA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12219 7y7a:CA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12220 7y7a:CA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12221 7y7a:CC (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12222 7y7a:CC (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12223 7y7a:CC (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12224 7y7a:CC (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12225 7y7a:CD (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12226 7y7a:CD (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12227 7y7a:CD (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12228 7y7a:CD (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12229 7y7a:CF (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12230 7y7a:CF (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12231 7y7a:CF (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12232 7y7a:CF (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12233 7y7a:CH (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12234 7y7a:CH (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12235 7y7a:CH (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12236 7y7a:CJ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12237 7y7a:CJ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12238 7y7a:CJ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12239 7y7a:CK (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12240 7y7a:CL (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12241 7y7a:CL (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12242 7y7a:CL (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12243 7y7a:CM (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12244 7y7a:CM (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12245 7y7a:CM (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12246 7y7a:CM (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12247 7y7a:CQ (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12248 7y7a:CQ (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12249 7y7a:CQ (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12250 7y7a:CR (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12251 7y7a:CS (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12252 7y7a:CT (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12253 7y7a:CT (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12254 7y7a:CT (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12255 7y7a:CU (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12256 7y7a:CU (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12257 7y7a:CU (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12258 7y7a:CV (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12259 7y7a:CV (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12260 7y7a:CV (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12261 7y7a:CV (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12262 7y7a:CW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12263 7y7a:CW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12264 7y7a:CW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12265 7y7a:Ca (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12266 7y7a:Ca (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12267 7y7a:Cb (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12268 7y7a:Cb (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12269 7y7a:Cb (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12270 7y7a:Cc (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12271 7y7a:Cc (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12272 7y7a:Cc (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12273 7y7a:Cc (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12274 7y7a:Cf (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12275 7y7a:Cf (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12276 7y7a:Cg (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12277 7y7a:Cg (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12278 7y7a:Cg (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12279 7y7a:Cg (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12280 7y7a:Ch (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12281 7y7a:Ch (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12282 7y7a:Ch (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12283 7y7a:Ci (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12284 7y7a:Ci (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12285 7y7a:Ci (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12286 7y7a:Ci (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12287 7y7a:Ck (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12288 7y7a:Ck (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12289 7y7a:Ck (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12290 7y7a:Cl (4.3) BS01 PEB ? GO:0009507 ... P37207 36922595
    12291 7y7a:Cp (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12292 7y7a:Cp (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12293 7y7a:Cp (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12294 7y7a:Cp (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12295 7y7a:D1 (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12296 7y7a:D2 (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12297 7y7a:D2 (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12298 7y7a:D2 (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12299 7y7a:D2 (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12300 7y7a:D3 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12301 7y7a:D3 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12302 7y7a:D3 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12303 7y7a:D3 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12304 7y7a:D4 (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12305 7y7a:D5 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12306 7y7a:D5 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12307 7y7a:D5 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12308 7y7a:D5 (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12309 7y7a:D6 (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12310 7y7a:D6 (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12311 7y7a:D6 (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12312 7y7a:D8 (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12313 7y7a:DA (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12314 7y7a:DA (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12315 7y7a:DA (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12316 7y7a:DC (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12317 7y7a:DC (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12318 7y7a:DC (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12319 7y7a:DC (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12320 7y7a:DD (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12321 7y7a:DD (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12322 7y7a:DD (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12323 7y7a:DD (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12324 7y7a:DF (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12325 7y7a:DF (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12326 7y7a:DF (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12327 7y7a:DF (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12328 7y7a:DH (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12329 7y7a:DH (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12330 7y7a:DH (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12331 7y7a:DH (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12332 7y7a:DI (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12333 7y7a:DJ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12334 7y7a:DJ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12335 7y7a:DJ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12336 7y7a:DJ (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12337 7y7a:DK (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12338 7y7a:DL (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12339 7y7a:DL (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12340 7y7a:DL (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12341 7y7a:DL (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12342 7y7a:DM (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12343 7y7a:DM (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12344 7y7a:DM (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12345 7y7a:DM (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12346 7y7a:DP (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12347 7y7a:DQ (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12348 7y7a:DQ (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12349 7y7a:DQ (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12350 7y7a:DR (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12351 7y7a:DS (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12352 7y7a:DT (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12353 7y7a:DT (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12354 7y7a:DT (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12355 7y7a:DU (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12356 7y7a:DU (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12357 7y7a:DU (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12358 7y7a:DU (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12359 7y7a:DV (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12360 7y7a:DV (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12361 7y7a:DV (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12362 7y7a:DV (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12363 7y7a:DW (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12364 7y7a:DW (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12365 7y7a:DW (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12366 7y7a:Da (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12367 7y7a:Da (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12368 7y7a:Da (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12369 7y7a:Db (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12370 7y7a:Db (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12371 7y7a:Db (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12372 7y7a:Dc (4.3) BS01 PEB ? GO:0009507 ... P11392 36922595
    12373 7y7a:Dc (4.3) BS02 PEB ? GO:0009507 ... P11392 36922595
    12374 7y7a:Dc (4.3) BS03 PEB ? GO:0009507 ... P11392 36922595
    12375 7y7a:Dc (4.3) BS04 PEB ? GO:0009507 ... P11392 36922595
    12376 7y7a:De (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12377 7y7a:Df (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12378 7y7a:Df (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12379 7y7a:Df (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12380 7y7a:Dg (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12381 7y7a:Dg (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12382 7y7a:Dg (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12383 7y7a:Dg (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12384 7y7a:Dh (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12385 7y7a:Dh (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12386 7y7a:Dh (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12387 7y7a:Dh (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12388 7y7a:Di (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12389 7y7a:Di (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12390 7y7a:Di (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12391 7y7a:Di (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12392 7y7a:Dj (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12393 7y7a:Dk (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12394 7y7a:Dk (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    12395 7y7a:Dk (4.3) BS03 PEB ? GO:0009507 ... P11393 36922595
    12396 7y7a:Dk (4.3) BS04 PEB ? GO:0009507 ... P11393 36922595
    12397 7y7a:Dl (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12398 7y7a:Dn (4.3) BS01 PEB ? GO:0009507 ... P37208 36922595
    12399 7y7a:Dp (4.3) BS01 PEB ? GO:0009507 ... P11393 36922595
    12400 7y7a:Dp (4.3) BS02 PEB ? GO:0009507 ... P11393 36922595
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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