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BioLiP
Download all results in tab-seperated text for 14664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10201 6dac:A (2.55) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    10202 6dag:A (2.8) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    10203 6daj:A (2.45) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    10204 6dal:A (2.65) BS01 HEM 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73
    GO:0002933 ... P08684 30912932
    10205 6dcd:A (1.55) BS01 HEM ? GO:0004497 ... B2HFD6 30826435
    10206 6dhe:E (2.05) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10207 6dhe:F (2.05) BS02 HEM ? GO:0009523 ... Q8DIN9 30405241
    10208 6dhe:e (2.05) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10209 6dhe:f (2.05) BS02 HEM ? GO:0009523 ... Q8DIN9 30405241
    10210 6dhf:E (2.08) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10211 6dhf:F (2.08) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    10212 6dhf:e (2.08) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10213 6dhf:f (2.08) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    10214 6dhg:E (2.5) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10215 6dhg:F (2.5) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    10216 6dhg:e (2.5) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10217 6dhg:f (2.5) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    10218 6dhh:E (2.2) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10219 6dhh:F (2.2) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    10220 6dhh:e (2.2) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10221 6dhh:f (2.2) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    10222 6dho:E (2.07) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10223 6dho:F (2.07) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    10224 6dho:e (2.07) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10225 6dho:f (2.07) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    10226 6dhp:E (2.04) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10227 6dhp:F (2.04) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    10228 6dhp:e (2.04) BS01 HEM ? GO:0005506 ... Q8DIP0 30405241
    10229 6dhp:f (2.04) BS01 HEM ? GO:0009523 ... Q8DIN9 30405241
    10230 6di4:A (1.9) BS01 HEM ? GO:0004601 ... P69905 30289405
    10231 6di4:B (1.9) BS01 HEM ? GO:0004601 ... P68871 30289405
    10232 6di4:C (1.9) BS01 HEM ? GO:0004601 ... P69905 30289405
    10233 6di4:D (1.9) BS01 HEM ? GO:0004601 ... P68871 30289405
    10234 6dpq:A (2.94) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30347977
    10235 6dpr:A (3.2) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30347977
    10236 6ds7:A (1.9) BS01 HEM 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    10237 6ds7:A (1.9) BS02 HEM 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    10238 6ds7:B (1.9) BS01 HEM 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    10239 6ds7:B (1.9) BS02 HEM 1.14.99.57 GO:0004392 ... P9WKH3 N/A
    10240 6dwm:A (2.85) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0001666 ... P04798 30254074
    10241 6dwm:B (2.85) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0001666 ... P04798 30254074
    10242 6dwm:C (2.85) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0001666 ... P04798 30254074
    10243 6dwm:D (2.85) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0001666 ... P04798 30254074
    10244 6dwn:A (3.0) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0001666 ... P04798 30254074
    10245 6dwn:B (3.0) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0001666 ... P04798 30254074
    10246 6dwn:C (3.0) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0001666 ... P04798 30254074
    10247 6dwn:D (3.0) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0001666 ... P04798 30254074
    10248 6dxi:A (2.6) BS01 HEM ? GO:0020037 ... Q8YUQ7 N/A
    10249 6e02:A (1.76) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    10250 6e03:A (1.76) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    10251 6e04:A (2.0) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 37011611
    10252 6e35:A (2.411) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 N/A
    10253 6e35:B (2.411) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 N/A
    10254 6e40:A (2.306) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10255 6e40:B (2.306) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10256 6e40:C (2.306) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10257 6e40:D (2.306) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10258 6e41:A (2.291) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10259 6e41:B (2.291) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10260 6e41:C (2.291) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10261 6e41:D (2.291) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10262 6e42:A (2.103) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10263 6e42:B (2.103) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10264 6e42:C (2.103) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10265 6e42:D (2.103) BS02 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10266 6e44:A (1.903) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10267 6e44:B (1.903) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10268 6e44:C (1.903) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10269 6e44:D (1.903) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10270 6e45:A (2.0) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10271 6e45:B (2.0) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10272 6e45:C (2.0) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10273 6e45:D (2.0) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10274 6e46:A (2.09) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10275 6e46:B (2.09) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10276 6e46:C (2.09) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10277 6e46:D (2.09) BS01 HEM 1.13.11.52 GO:0002376 ... P14902 30387777
    10278 6e8q:A (2.2) BS01 HEM ? GO:0004497 ... A6ZSR0 30397057
    10279 6eha:A (2.0) BS01 HEM 1.14.14.18 GO:0001525 ... P09601 31276659
    10280 6eha:B (2.0) BS01 HEM 1.14.14.18 GO:0001525 ... P09601 31276659
    10281 6ekw:A (1.43) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    10282 6ekx:A (1.13) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    10283 6eky:A (1.23) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    10284 6ekz:A (1.08) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    10285 6el0:A (1.65) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    10286 6el4:A (1.53) BS01 HEM 1.11.2.1 GO:0004601 ... B9W4V6 30376293
    10287 6erc:A (2.50002) BS01 HEM 1.11.1.7 GO:0004601 ... Q6TMK4 29242189
    10288 6erc:B (2.50002) BS02 HEM 1.11.1.7 GO:0004601 ... Q6TMK4 29242189
    10289 6et5:C (2.87) BS01 HEM ? GO:0005506 ... P07173 29618818
    10290 6et5:C (2.87) BS02 HEM ? GO:0005506 ... P07173 29618818
    10291 6et5:C (2.87) BS03 HEM ? GO:0005506 ... P07173 29618818
    10292 6et5:C (2.87) BS04 HEM ? GO:0005506 ... P07173 29618818
    10293 6eye:A (1.7) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 29108649
    10294 6f0a:A (2.26) BS03 HEM 1.13.11.52 GO:0002376 ... P14902 29240291
    10295 6f0a:C (2.26) BS03 HEM 1.13.11.52 GO:0002376 ... P14902 29240291
    10296 6f0b:A (2.8) BS01 HEM ? GO:0004497 ... Q8VS75 30516965
    10297 6f0c:A (1.7) BS01 HEM ? GO:0004497 ... Q8VS75 30516965
    10298 6f17:A (1.45) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    10299 6f18:A (1.8) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    10300 6f19:A (1.895) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    10301 6f1a:A (2.399) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    10302 6f85:A (2.05) BS01 HEM 1.14.15.19 GO:0004497 ... A9FDB7 29509407
    10303 6f85:B (2.05) BS01 HEM 1.14.15.19 GO:0004497 ... A9FDB7 29509407
    10304 6f88:A (1.75) BS01 HEM 1.14.15.19 GO:0004497 ... A9FDB7 29509407
    10305 6f88:B (1.75) BS01 HEM 1.14.15.19 GO:0004497 ... A9FDB7 29509407
    10306 6f8a:A (1.35) BS01 HEM 1.14.15.19 GO:0004497 ... A9FDB7 29509407
    10307 6f8a:B (1.35) BS01 HEM 1.14.15.19 GO:0004497 ... A9FDB7 29509407
    10308 6f8c:A (1.9) BS01 HEM 1.14.15.19 GO:0004497 ... A9FDB7 29509407
    10309 6f8c:B (1.9) BS01 HEM 1.14.15.19 GO:0004497 ... A9FDB7 29509407
    10310 6fiy:A (1.09) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 30072383
    10311 6fiy:B (1.09) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 30072383
    10312 6fja:A (2.2) BS02 HEM 1.7.2.1 GO:0005507 ... I6NAW4 N/A
    10313 6fks:A (1.6) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 30072383
    10314 6fks:B (1.6) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 30072383
    10315 6fkt:A (1.86003) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 30072383
    10316 6fkt:B (1.86003) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 30072383
    10317 6fl2:A (1.27) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 30072383
    10318 6fl2:B (1.27) BS01 HEM 1.11.1.- GO:0004601 ... A0A0W8ATM9 30072383
    10319 6fmo:A (3.18) BS01 HEM 1.14.14.154 GO:0004497 ... Q7Z1V1 30327430
    10320 6fmo:B (3.18) BS01 HEM 1.14.14.154 GO:0004497 ... Q7Z1V1 30327430
    10321 6fmo:C (3.18) BS01 HEM 1.14.14.154 GO:0004497 ... Q7Z1V1 30327430
    10322 6fmo:D (3.18) BS01 HEM 1.14.14.154 GO:0004497 ... Q7Z1V1 30327430
    10323 6fo0:C (4.1) BS01 HEM ? GO:0005739 ... P00157 29765610
    10324 6fo0:C (4.1) BS02 HEM ? GO:0005739 ... P00157 29765610
    10325 6fo0:P (4.1) BS01 HEM ? GO:0005739 ... P00157 29765610
    10326 6fo0:P (4.1) BS02 HEM ? GO:0005739 ... P00157 29765610
    10327 6fo2:C (4.4) BS01 HEM ? GO:0005739 ... P00157 29765610
    10328 6fo2:C (4.4) BS02 HEM ? GO:0005739 ... P00157 29765610
    10329 6fo2:P (4.4) BS01 HEM ? GO:0005739 ... P00157 29765610
    10330 6fo2:P (4.4) BS02 HEM ? GO:0005739 ... P00157 29765610
    10331 6fo6:C (4.1) BS01 HEM ? GO:0005739 ... P00157 29765610
    10332 6fo6:C (4.1) BS02 HEM ? GO:0005739 ... P00157 29765610
    10333 6fo6:P (4.1) BS01 HEM ? GO:0005739 ... P00157 29765610
    10334 6fo6:P (4.1) BS02 HEM ? GO:0005739 ... P00157 29765610
    10335 6fqf:A (2.1) BS01 HEM ? GO:0004601 ... P68871 29857171
    10336 6fqf:B (2.1) BS01 HEM ? GO:0004601 ... P68871 29857171
    10337 6fqf:C (2.1) BS01 HEM ? GO:0004601 ... P68871 29857171
    10338 6fqf:D (2.1) BS01 HEM ? GO:0004601 ... P68871 29857171
    10339 6fsh:A (2.5) BS01 HEM ? GO:0004497 ... Q70AY8 29751197
    10340 6fsh:B (2.5) BS01 HEM ? GO:0004497 ... Q70AY8 29751197
    10341 6fsh:C (2.5) BS01 HEM ? GO:0004497 ... Q70AY8 29751197
    10342 6fsh:D (2.5) BS01 HEM ? GO:0004497 ... Q70AY8 29751197
    10343 6fsk:A (1.56) BS01 HEM ? GO:0004601 ... A0A067N4E7 N/A
    10344 6fsk:B (1.56) BS01 HEM ? GO:0004601 ... A0A067N4E7 N/A
    10345 6fsl:A (2.5) BS01 HEM ? GO:0004601 ... A0A067N4E7 N/A
    10346 6fsl:B (2.5) BS01 HEM ? GO:0004601 ... A0A067N4E7 N/A
    10347 6fuu:A (1.75) BS01 HEM N/A N/A N/A 29719099
    10348 6fwf:A (4.2) BS01 HEM 1.7.99.7 GO:0004129 ... C6S880 29483528
    10349 6fwf:A (4.2) BS02 HEM 1.7.99.7 GO:0004129 ... C6S880 29483528
    10350 6fyj:A (1.3) BS01 HEM 1.11.2.4 GO:0004497 ... I3DZK9 30119014
    10351 6g5a:A (1.483) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    10352 6g5b:A (1.6) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    10353 6g5o:A (2.25) BS01 HEM 1.14.15.- GO:0004497 ... G0L713 30404923
    10354 6g5o:B (2.25) BS01 HEM 1.14.15.- GO:0004497 ... G0L713 30404923
    10355 6g5q:A (2.4) BS02 HEM 1.14.15.- GO:0004497 ... G0L713 30404923
    10356 6g5q:B (2.4) BS02 HEM 1.14.15.- GO:0004497 ... G0L713 30404923
    10357 6g5t:A (1.5) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    10358 6g94:A (2.5) BS01 HEM ? GO:0005506 ... P0AAM1 29888350
    10359 6g94:B (2.5) BS01 HEM ? GO:0005506 ... P0AAM1 29888350
    10360 6geo:A (1.5) BS01 HEM 1.14.19.70 GO:0004497 ... P9WPP7 31367508
    10361 6geq:A (1.6) BS01 HEM 1.14.19.70 GO:0004497 ... P9WPP7 31367508
    10362 6gii:A (1.9) BS01 HEM ? GO:0004497 ... A0A0K6ITW2 29738765
    10363 6giq:C (3.23) BS01 HEM 7.1.1.8 GO:0005739 ... P00163 30598556
    10364 6giq:C (3.23) BS02 HEM 7.1.1.8 GO:0005739 ... P00163 30598556
    10365 6giq:D (3.23) BS01 HEM 7.1.1.8 GO:0005739 ... P07143 30598556
    10366 6giq:N (3.23) BS02 HEM 7.1.1.8 GO:0005739 ... P00163 30598556
    10367 6giq:N (3.23) BS03 HEM 7.1.1.8 GO:0005739 ... P00163 30598556
    10368 6giq:O (3.23) BS01 HEM 7.1.1.8 GO:0005739 ... P07143 30598556
    10369 6gk5:A (1.6) BS01 HEM 1.14.-.- GO:0004497 ... A9ERX9 30045877
    10370 6gk6:A (1.6) BS01 HEM 1.14.-.- GO:0004497 ... A9ERX9 30045877
    10371 6gmf:A (1.55) BS01 HEM ? GO:0004497 ... A0A017T5A5 30592153
    10372 6gzw:A (1.41) BS01 HEM N/A GO:0004601 ... N/A 30945782
    10373 6gzw:B (1.41) BS01 HEM N/A GO:0004601 ... N/A 30945782
    10374 6h08:A (1.9) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 32550044
    10375 6h08:B (1.9) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 32550044
    10376 6h08:C (1.9) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 32550044
    10377 6h1l:A (1.968) BS02 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... F2Q7T0 30733479
    10378 6h1l:B (1.968) BS02 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... F2Q7T0 30733479
    10379 6h1o:A (1.734) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 30733479
    10380 6h1o:B (1.734) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 30733479
    10381 6h1s:A (1.95) BS02 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 30733479
    10382 6h1s:B (1.95) BS02 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 30733479
    10383 6h1t:A (2.08) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... A0A1Q8UP87 30733479
    10384 6h1t:B (2.08) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... A0A1Q8UP87 30733479
    10385 6h1t:C (2.08) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... A0A1Q8UP87 30733479
    10386 6h1t:D (2.08) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... A0A1Q8UP87 30733479
    10387 6h5z:A (1.8) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 30926858
    10388 6h6c:A (1.75) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 30926858
    10389 6h6i:A (1.6) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 30926858
    10390 6h6j:A (2.6) BS01 HEM 1.7.-.- GO:0005092 ... Q9ER97 30926858
    10391 6hal:A (2.2) BS01 HEM ? GO:0004601 ... P69905 30289410
    10392 6hal:B (2.2) BS01 HEM ? GO:0004601 ... P68871 30289410
    10393 6hal:C (2.2) BS01 HEM ? GO:0004601 ... P69905 30289410
    10394 6hal:D (2.2) BS01 HEM ? GO:0004601 ... P68871 30289410
    10395 6haw:C (3.45) BS01 HEM ? GO:0005739 ... P00157 30613327
    10396 6haw:C (3.45) BS02 HEM ? GO:0005739 ... P00157 30613327
    10397 6hbi:A (1.8) BS01 HEM ? GO:0001666 ... P02213 9826511
    10398 6hbi:A (1.8) BS02 HEM ? GO:0001666 ... P02213 9826511
    10399 6hbi:B (1.8) BS01 HEM ? GO:0001666 ... P02213 9826511
    10400 6hbi:B (1.8) BS02 HEM ? GO:0001666 ... P02213 9826511

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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