Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 14664 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2801 2fl0:G (2.7) BS03 HEM 1.16.3.1 GO:0004322 ... P22759 16584178
    2802 2fl0:H (2.7) BS01 HEM 1.16.3.1 GO:0004322 ... P22759 16584178
    2803 2flq:A (3.2) BS02 HEM 1.14.13.39 GO:0004517 ... Q5KZC5 16407211
    2804 2flq:B (3.2) BS02 HEM 1.14.13.39 GO:0004517 ... Q5KZC5 16407211
    2805 2fmy:A (2.2) BS01 HEM ? GO:0003677 ... Q3AB29 17292914
    2806 2fmy:A (2.2) BS02 HEM ? GO:0003677 ... Q3AB29 17292914
    2807 2fmy:B (2.2) BS01 HEM ? GO:0003677 ... Q3AB29 17292914
    2808 2fmy:B (2.2) BS03 HEM ? GO:0003677 ... Q3AB29 17292914
    2809 2fmy:C (2.2) BS01 HEM ? GO:0003677 ... Q3AB29 17292914
    2810 2fmy:C (2.2) BS02 HEM ? GO:0003677 ... Q3AB29 17292914
    2811 2fmy:D (2.2) BS01 HEM ? GO:0003677 ... Q3AB29 17292914
    2812 2fmy:D (2.2) BS03 HEM ? GO:0003677 ... Q3AB29 17292914
    2813 2fr7:A (2.01) BS01 HEM 1.14.99.15 GO:0004497 ... Q6N8N2 18762195
    2814 2frf:A (1.2) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 16777231
    2815 2fri:X (1.6) BS02 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 16777231
    2816 2frj:X (1.3) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 16777231
    2817 2frk:X (1.3) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 16777231
    2818 2frz:A (2.1) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    2819 2frz:B (2.1) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    2820 2fyn:A (3.2) BS01 HEM ? GO:0005886 ... Q02761 16924113
    2821 2fyn:A (3.2) BS02 HEM ? GO:0005886 ... Q02761 16924113
    2822 2fyn:B (3.2) BS01 HEM ? GO:0005886 ... Q02760 16924113
    2823 2fyn:D (3.2) BS01 HEM ? GO:0005886 ... Q02761 16924113
    2824 2fyn:D (3.2) BS02 HEM ? GO:0005886 ... Q02761 16924113
    2825 2fyn:E (3.2) BS01 HEM ? GO:0005886 ... Q02760 16924113
    2826 2fyn:G (3.2) BS01 HEM ? GO:0005886 ... Q02761 16924113
    2827 2fyn:G (3.2) BS02 HEM ? GO:0005886 ... Q02761 16924113
    2828 2fyn:H (3.2) BS01 HEM ? GO:0005886 ... Q02760 16924113
    2829 2fyn:J (3.2) BS01 HEM ? GO:0005886 ... Q02761 16924113
    2830 2fyn:J (3.2) BS02 HEM ? GO:0005886 ... Q02761 16924113
    2831 2fyn:K (3.2) BS01 HEM ? GO:0005886 ... Q02760 16924113
    2832 2fyn:M (3.2) BS01 HEM ? GO:0005886 ... Q02761 16924113
    2833 2fyn:M (3.2) BS02 HEM ? GO:0005886 ... Q02761 16924113
    2834 2fyn:N (3.2) BS01 HEM ? GO:0005886 ... Q02760 16924113
    2835 2fyn:P (3.2) BS01 HEM ? GO:0005886 ... Q02761 16924113
    2836 2fyn:P (3.2) BS02 HEM ? GO:0005886 ... Q02761 16924113
    2837 2fyn:Q (3.2) BS01 HEM ? GO:0005886 ... Q02760 16924113
    2838 2fyu:C (2.26) BS01 HEM ? GO:0005739 ... P00157 16924113
    2839 2fyu:C (2.26) BS02 HEM ? GO:0005739 ... P00157 16924113
    2840 2fyu:D (2.26) BS01 HEM 7.1.1.8 GO:0009055 ... P00125 16924113
    2841 2g0r:A (1.95) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 16790933
    2842 2g0s:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 16790933
    2843 2g0v:A (1.95) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 16790933
    2844 2g0x:A (1.95) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 16790933
    2845 2g0z:A (1.95) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 16790933
    2846 2g10:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 16790933
    2847 2g11:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 16790933
    2848 2g12:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 16790933
    2849 2g14:A (1.9) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 16790933
    2850 2g3h:A (1.4) BS01 HEM 1.11.1.7 GO:0001666 ... Q9VF15 16906763
    2851 2g5g:X (1.9) BS01 HEM ? N/A Q0PBW2 16950397
    2852 2g6h:A (2.0) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2853 2g6h:B (2.0) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2854 2g6i:A (1.9) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2855 2g6i:B (1.9) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2856 2g6j:A (2.3) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2857 2g6j:B (2.3) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2858 2g6k:A (2.0) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2859 2g6k:B (2.0) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2860 2g6l:A (2.05) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2861 2g6l:B (2.05) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2862 2g6m:A (1.85) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2863 2g6m:B (1.85) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2864 2g6n:A (1.9) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2865 2g6n:B (1.9) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 16804678
    2866 2g6o:A (1.9) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 16804678
    2867 2g6o:B (1.9) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 16804678
    2868 2gb8:A (-1.00) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 17146057
    2869 2gdm:A (1.7) BS01 HEM ? GO:0005344 ... P02240 7643380
    2870 2ggn:X (1.35) BS01 HEM 1.11.1.11 GO:0004601 ... Q43758 16762924
    2871 2ghc:X (1.25) BS01 HEM 1.11.1.11 GO:0004601 ... Q43758 16762924
    2872 2ghd:X (1.4) BS01 HEM 1.11.1.11 GO:0004601 ... Q43758 16762924
    2873 2ghe:X (1.75) BS01 HEM 1.11.1.11 GO:0004601 ... Q43758 16762924
    2874 2ghh:X (2.013) BS01 HEM 1.11.1.11 GO:0004601 ... Q43758 16762924
    2875 2ghk:X (1.999) BS01 HEM 1.11.1.11 GO:0004601 ... Q43758 16762924
    2876 2gjm:A (2.75) BS02 HEM 1.11.1.7 GO:0004601 ... A5JUY8 N/A
    2877 2gkm:A (1.731) BS01 HEM ? GO:0005344 ... P9WN25 16846220
    2878 2gkm:B (1.731) BS01 HEM ? GO:0005344 ... P9WN25 16846220
    2879 2gkn:A (2.1) BS01 HEM ? GO:0005344 ... P9WN25 16846220
    2880 2gkn:B (2.1) BS01 HEM ? GO:0005344 ... P9WN25 16846220
    2881 2gl3:A (1.92) BS01 HEM ? GO:0005344 ... P9WN25 16846220
    2882 2gl3:B (1.92) BS01 HEM ? GO:0005344 ... P9WN25 16846220
    2883 2gln:A (1.98) BS01 HEM ? GO:0005344 ... P9WN25 16846220
    2884 2gln:B (1.98) BS01 HEM ? GO:0005344 ... P9WN25 16846220
    2885 2gnv:A (2.3) BS01 HEM 1.7.2.- GO:0005634 ... O04986 16893175
    2886 2gnv:B (2.3) BS01 HEM 1.7.2.- GO:0005634 ... O04986 16893175
    2887 2gnw:A (2.4) BS01 HEM 1.7.2.- GO:0005634 ... O04986 16893175
    2888 2gnw:B (2.4) BS01 HEM 1.7.2.- GO:0005634 ... O04986 16893175
    2889 2gqx:A (2.1) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 17962225
    2890 2gqx:B (2.1) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 17962225
    2891 2gr6:A (2.3) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    2892 2gr6:B (2.3) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 N/A
    2893 2grf:A (2.1) BS01 HEM ? GO:0001666 ... P02213 16684887
    2894 2grf:A (2.1) BS02 HEM ? GO:0001666 ... P02213 16684887
    2895 2grf:B (2.1) BS01 HEM ? GO:0001666 ... P02213 16684887
    2896 2grf:B (2.1) BS02 HEM ? GO:0001666 ... P02213 16684887
    2897 2grh:A (1.5) BS01 HEM ? GO:0001666 ... P02213 16684887
    2898 2grh:A (1.5) BS02 HEM ? GO:0001666 ... P02213 16684887
    2899 2grh:B (1.5) BS01 HEM ? GO:0001666 ... P02213 16684887
    2900 2grh:B (1.5) BS02 HEM ? GO:0001666 ... P02213 16684887
    2901 2grz:A (1.6) BS01 HEM ? GO:0001666 ... P02213 16684887
    2902 2grz:A (1.6) BS02 HEM ? GO:0001666 ... P02213 16684887
    2903 2grz:B (1.6) BS01 HEM ? GO:0001666 ... P02213 16684887
    2904 2grz:B (1.6) BS02 HEM ? GO:0001666 ... P02213 16684887
    2905 2gtf:X (1.4) BS01 HEM ? GO:0005576 ... Q26241 N/A
    2906 2gtl:A (3.5) BS01 HEM ? GO:0005344 ... P13579 16843898
    2907 2gtl:A (3.5) BS02 HEM ? GO:0005344 ... P13579 16843898
    2908 2gtl:B (3.5) BS01 HEM ? GO:0001666 ... P02218 16843898
    2909 2gtl:C (3.5) BS01 HEM ? GO:0005344 ... P11069 16843898
    2910 2gtl:D (3.5) BS01 HEM ? GO:0005344 ... O61233 16843898
    2911 2gtl:E (3.5) BS01 HEM ? GO:0005344 ... P13579 16843898
    2912 2gtl:E (3.5) BS02 HEM ? GO:0005344 ... P13579 16843898
    2913 2gtl:F (3.5) BS01 HEM ? GO:0001666 ... P02218 16843898
    2914 2gtl:G (3.5) BS01 HEM ? GO:0005344 ... P11069 16843898
    2915 2gtl:G (3.5) BS02 HEM ? GO:0005344 ... P11069 16843898
    2916 2gtl:H (3.5) BS01 HEM ? GO:0005344 ... O61233 16843898
    2917 2gtl:I (3.5) BS01 HEM ? GO:0005344 ... P13579 16843898
    2918 2gtl:I (3.5) BS02 HEM ? GO:0005344 ... P13579 16843898
    2919 2gtl:J (3.5) BS01 HEM ? GO:0001666 ... P02218 16843898
    2920 2gtl:K (3.5) BS01 HEM ? GO:0005344 ... P11069 16843898
    2921 2gtl:L (3.5) BS01 HEM ? GO:0005344 ... O61233 16843898
    2922 2h35:A (-1.00) BS01 HEM ? GO:0004601 ... P69905 17060917
    2923 2h35:B (-1.00) BS01 HEM ? GO:0004601 ... P68871 17060917
    2924 2h35:C (-1.00) BS01 HEM ? GO:0004601 ... P69905 17060917
    2925 2h35:D (-1.00) BS01 HEM ? GO:0004601 ... P68871 17060917
    2926 2h7q:A (1.5) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 16943206
    2927 2h7r:A (2.1) BS01 HEM 1.14.15.1 GO:0004497 ... P00183 16943206
    2928 2h88:C (1.74) BS01 HEM 1.3.5.1 GO:0005739 ... D0VWW3 16935256
    2929 2h88:D (1.74) BS01 HEM 1.3.5.1 GO:0005740 ... Q5ZIS0 16935256
    2930 2h88:P (1.74) BS01 HEM 1.3.5.1 GO:0005739 ... D0VWW3 16935256
    2931 2h88:Q (1.74) BS01 HEM 1.3.5.1 GO:0005740 ... Q5ZIS0 16935256
    2932 2h89:C (2.4) BS01 HEM 1.3.5.1 GO:0005739 ... D0VWW3 16935256
    2933 2h89:D (2.4) BS01 HEM 1.3.5.1 GO:0005740 ... Q5ZIS0 16935256
    2934 2h8d:A (1.78) BS01 HEM ? GO:0004601 ... P80043 16909420
    2935 2h8d:B (1.78) BS01 HEM ? GO:0004601 ... P80044 16909420
    2936 2h8d:C (1.78) BS01 HEM ? GO:0004601 ... P80043 16909420
    2937 2h8d:D (1.78) BS01 HEM ? GO:0004601 ... P80044 16909420
    2938 2h8f:A (1.3) BS01 HEM ? GO:0004601 ... P80043 16909420
    2939 2h8f:B (1.3) BS01 HEM ? GO:0004601 ... P80044 16909420
    2940 2h8f:C (1.3) BS01 HEM ? GO:0004601 ... P80043 16909420
    2941 2h8f:D (1.3) BS01 HEM ? GO:0004601 ... P80044 16909420
    2942 2hbc:A (2.1) BS01 HEM ? GO:0004601 ... P69905 N/A
    2943 2hbc:B (2.1) BS01 HEM ? GO:0004601 ... P68871 N/A
    2944 2hbd:A (2.2) BS01 HEM ? GO:0004601 ... P69905 N/A
    2945 2hbd:B (2.2) BS01 HEM ? GO:0004601 ... P68871 N/A
    2946 2hbe:A (2.0) BS01 HEM ? GO:0004601 ... P69905 N/A
    2947 2hbe:B (2.0) BS01 HEM ? GO:0004601 ... P68871 N/A
    2948 2hbf:A (2.2) BS01 HEM ? GO:0004601 ... P69905 N/A
    2949 2hbf:B (2.2) BS01 HEM ? GO:0004601 ... P68871 N/A
    2950 2hbg:A (1.5) BS01 HEM ? GO:0001666 ... P02216 2585515
    2951 2hbs:A (2.05) BS01 HEM ? GO:0004601 ... P69905 9325099
    2952 2hbs:B (2.05) BS01 HEM ? GO:0004601 ... P68871 9325099
    2953 2hbs:C (2.05) BS01 HEM ? GO:0004601 ... P69905 9325099
    2954 2hbs:D (2.05) BS01 HEM ? GO:0004601 ... P68871 9325099
    2955 2hbs:E (2.05) BS01 HEM ? GO:0004601 ... P69905 9325099
    2956 2hbs:F (2.05) BS01 HEM ? GO:0004601 ... P68871 9325099
    2957 2hbs:G (2.05) BS01 HEM ? GO:0004601 ... P69905 9325099
    2958 2hbs:H (2.05) BS01 HEM ? GO:0004601 ... P68871 9325099
    2959 2hco:A (2.7) BS01 HEM ? GO:0004601 ... P69905 7373648
    2960 2hco:B (2.7) BS01 HEM ? GO:0004601 ... P68871 7373648
    2961 2hhb:A (1.74) BS01 HEM ? GO:0004601 ... P69905 6726807
    2962 2hhb:B (1.74) BS01 HEM ? GO:0004601 ... P68871 6726807
    2963 2hhb:C (1.74) BS01 HEM ? GO:0004601 ... P69905 6726807
    2964 2hhb:D (1.74) BS01 HEM ? GO:0004601 ... P68871 6726807
    2965 2hhd:A (2.2) BS01 HEM ? GO:0004601 ... P69905 8639677
    2966 2hhd:B (2.2) BS01 HEM ? GO:0004601 ... P68871 8639677
    2967 2hhd:C (2.2) BS01 HEM ? GO:0004601 ... P69905 8639677
    2968 2hhd:D (2.2) BS01 HEM ? GO:0004601 ... P68871 8639677
    2969 2hhe:A (2.2) BS01 HEM ? GO:0004601 ... P69905 7929044
    2970 2hhe:B (2.2) BS01 HEM ? GO:0004601 ... P68871 7929044
    2971 2hhe:C (2.2) BS01 HEM ? GO:0004601 ... P69905 7929044
    2972 2hhe:D (2.2) BS01 HEM ? GO:0004601 ... P68871 7929044
    2973 2hi4:A (1.95) BS01 HEM 1.14.14.1
    4.2.1.152
    GO:0004497 ... P05177 17311915
    2974 2hkx:A (2.3) BS01 HEM ? GO:0003677 ... Q3AB29 17327664
    2975 2hkx:B (2.3) BS01 HEM ? GO:0003677 ... Q3AB29 17327664
    2976 2hpd:A (2.0) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 8342039
    2977 2hpd:B (2.0) BS01 HEM 1.14.14.1
    1.6.2.4
    GO:0004497 ... P14779 8342039
    2978 2htn:A (2.5) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 17077480
    2979 2htn:B (2.5) BS01 HEM 1.16.3.1 GO:0004322 ... P0ABD3 17077480
    2980 2htn:C (2.5) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 17077480
    2981 2htn:D (2.5) BS01 HEM 1.16.3.1 GO:0004322 ... P0ABD3 17077480
    2982 2htn:E (2.5) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 17077480
    2983 2htn:F (2.5) BS01 HEM 1.16.3.1 GO:0004322 ... P0ABD3 17077480
    2984 2htn:G (2.5) BS03 HEM 1.16.3.1 GO:0004322 ... P0ABD3 17077480
    2985 2htn:H (2.5) BS01 HEM 1.16.3.1 GO:0004322 ... P0ABD3 17077480
    2986 2hx2:A (1.95) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 17425297
    2987 2hx2:B (1.95) BS03 HEM 1.14.13.39 GO:0004517 ... P29473 17425297
    2988 2hx3:A (2.0) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 17425297
    2989 2hx3:B (2.0) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 17425297
    2990 2hx4:A (2.15) BS02 HEM 1.14.13.39 GO:0004517 ... P29476 17425297
    2991 2hx4:B (2.15) BS03 HEM 1.14.13.39 GO:0004517 ... P29476 17425297
    2992 2hys:A (1.2) BS01 HEM ? GO:0005576 ... Q26241 17290983
    2993 2hz1:A (1.8) BS02 HEM ? GO:0005344 ... P73925 17242429
    2994 2hz2:A (2.0) BS01 HEM ? GO:0005344 ... P73925 17242429
    2995 2hz3:A (1.9) BS01 HEM ? GO:0005344 ... P73925 17242429
    2996 2i89:A (2.1) BS01 HEM ? GO:0020037 ... P04166 17105194
    2997 2i89:B (2.1) BS01 HEM ? GO:0020037 ... P04166 17105194
    2998 2i89:C (2.1) BS01 HEM ? GO:0020037 ... P04166 17105194
    2999 2i89:D (2.1) BS01 HEM ? GO:0020037 ... P04166 17105194
    3000 2i96:A (-1.00) BS01 HEM ? GO:0020037 ... P00167 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218