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BioLiP
Download all results in tab-seperated text for 666 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    401 7coh:O (1.3) BS02 HEA 7.1.1.9 GO:0004129 ... P68530 N/A
    402 7cp5:A (1.76) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    403 7cp5:A (1.76) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    404 7cp5:B (1.76) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 34274318
    405 7cp5:N (1.76) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    406 7cp5:N (1.76) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    407 7cp5:O (1.76) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 34274318
    408 7d5w:A (1.84) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    409 7d5w:A (1.84) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    410 7d5w:B (1.84) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 34274318
    411 7d5w:N (1.84) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    412 7d5w:N (1.84) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    413 7d5w:O (1.84) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 34274318
    414 7d5x:A (1.74) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    415 7d5x:A (1.74) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    416 7d5x:B (1.74) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 34274318
    417 7d5x:N (1.74) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    418 7d5x:N (1.74) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 34274318
    419 7d5x:O (1.74) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 34274318
    420 7dgq:C3 (5.0) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 34913730
    421 7dgq:C3 (5.0) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 34913730
    422 7dgr:A9 (4.6) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 34913730
    423 7dgr:A9 (4.6) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 34913730
    424 7dgs:A9 (7.8) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 34913730
    425 7dgs:A9 (7.8) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 34913730
    426 7dkf:A3 (8.3) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 34913730
    427 7dkf:A3 (8.3) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 34913730
    428 7e1v:F (2.68) BS02 HEA N/A GO:0004129 ... N/A 34819223
    429 7e1v:F (2.68) BS03 HEA N/A GO:0004129 ... N/A 34819223
    430 7e1v:R (2.68) BS02 HEA N/A GO:0004129 ... N/A 34819223
    431 7e1v:R (2.68) BS03 HEA N/A GO:0004129 ... N/A 34819223
    432 7e1w:F (2.67) BS02 HEA N/A GO:0004129 ... N/A 34819223
    433 7e1w:F (2.67) BS03 HEA N/A GO:0004129 ... N/A 34819223
    434 7e1w:R (2.67) BS02 HEA N/A GO:0004129 ... N/A 34819223
    435 7e1w:R (2.67) BS03 HEA N/A GO:0004129 ... N/A 34819223
    436 7e1x:F (2.93) BS02 HEA N/A GO:0004129 ... N/A 34819223
    437 7e1x:F (2.93) BS03 HEA N/A GO:0004129 ... N/A 34819223
    438 7e1x:R (2.93) BS02 HEA N/A GO:0004129 ... N/A 34819223
    439 7e1x:R (2.93) BS03 HEA N/A GO:0004129 ... N/A 34819223
    440 7ev7:A (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 N/A
    441 7ev7:A (1.7) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 N/A
    442 7ev7:B (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 N/A
    443 7ev7:N (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 N/A
    444 7ev7:N (1.7) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 N/A
    445 7ev7:O (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 N/A
    446 7jro:a (3.8) BS01 HEA N/A GO:0004129 ... N/A 33463523
    447 7jro:a (3.8) BS02 HEA N/A GO:0004129 ... N/A 33463523
    448 7jrp:a (3.8) BS01 HEA N/A GO:0004129 ... N/A 33463523
    449 7jrp:a (3.8) BS02 HEA N/A GO:0004129 ... N/A 33463523
    450 7o37:a (3.2) BS02 HEA 7.1.1.9 GO:0001666 ... P00397 34616041
    451 7o37:a (3.2) BS03 HEA 7.1.1.9 GO:0001666 ... P00397 34616041
    452 7o37:b (3.2) BS01 HEA 7.1.1.9 GO:0001666 ... P00405 34616041
    453 7o3c:a (3.3) BS02 HEA 7.1.1.9 GO:0001666 ... P00397 34616041
    454 7o3c:a (3.3) BS03 HEA 7.1.1.9 GO:0001666 ... P00397 34616041
    455 7o3c:b (3.3) BS01 HEA 7.1.1.9 GO:0001666 ... P00405 34616041
    456 7o3e:a (3.6) BS02 HEA 7.1.1.9 GO:0001666 ... P00397 34616041
    457 7o3e:a (3.6) BS03 HEA 7.1.1.9 GO:0001666 ... P00397 34616041
    458 7o3e:b (3.6) BS01 HEA 7.1.1.9 GO:0001666 ... P00405 34616041
    459 7rh5:L (3.0) BS02 HEA N/A GO:0004129 ... N/A 34590581
    460 7rh5:L (3.0) BS03 HEA N/A GO:0004129 ... N/A 34590581
    461 7rh5:R (3.0) BS02 HEA N/A GO:0004129 ... N/A 34590581
    462 7rh5:R (3.0) BS03 HEA N/A GO:0004129 ... N/A 34590581
    463 7rh6:L (3.5) BS02 HEA N/A GO:0004129 ... N/A 34590581
    464 7rh6:L (3.5) BS03 HEA N/A GO:0004129 ... N/A 34590581
    465 7rh6:R (3.5) BS02 HEA N/A GO:0004129 ... N/A 34590581
    466 7rh6:R (3.5) BS03 HEA N/A GO:0004129 ... N/A 34590581
    467 7rh7:L (3.0) BS02 HEA N/A GO:0004129 ... N/A 34590581
    468 7rh7:L (3.0) BS03 HEA N/A GO:0004129 ... N/A 34590581
    469 7rh7:R (3.0) BS03 HEA N/A GO:0004129 ... N/A 34590581
    470 7rh7:R (3.0) BS04 HEA N/A GO:0004129 ... N/A 34590581
    471 7thu:A (1.93) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    472 7thu:A (1.93) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    473 7thu:B (1.93) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 35257742
    474 7thu:N (1.93) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    475 7thu:N (1.93) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    476 7tie:A (1.9) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    477 7tie:A (1.9) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    478 7tie:B (1.9) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 35257742
    479 7tie:N (1.9) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    480 7tie:N (1.9) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    481 7tih:A (2.35) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    482 7tih:A (2.35) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    483 7tih:N (2.35) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    484 7tih:N (2.35) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    485 7tih:O (2.35) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 35257742
    486 7tii:A (2.45) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    487 7tii:A (2.45) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    488 7tii:N (2.45) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    489 7tii:N (2.45) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 35257742
    490 7tii:O (2.45) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 35257742
    491 7vuw:A (1.6) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    492 7vuw:A (1.6) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    493 7vuw:B (1.6) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 37742916
    494 7vuw:N (1.6) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    495 7vuw:N (1.6) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    496 7vuw:O (1.6) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 37742916
    497 7vvr:A (1.65) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    498 7vvr:A (1.65) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    499 7vvr:B (1.65) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 37742916
    500 7vvr:N (1.65) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    501 7vvr:N (1.65) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    502 7vvr:O (1.65) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 37742916
    503 7w3e:A (1.45) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    504 7w3e:A (1.45) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    505 7w3e:B (1.45) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 37742916
    506 7w3e:N (1.45) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    507 7w3e:N (1.45) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 37742916
    508 7w3e:O (1.45) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 37742916
    509 7w5z:C1 (3.02) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 35357889
    510 7w5z:C1 (3.02) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 35357889
    511 7w5z:C2 (3.02) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y9 35357889
    512 7w5z:c1 (3.02) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 35357889
    513 7w5z:c1 (3.02) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 35357889
    514 7w5z:c2 (3.02) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y9 35357889
    515 7xma:A (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 36481732
    516 7xma:A (2.2) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36481732
    517 7xma:B (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396
    P68530    		 36481732
    518 7xma:N (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 36481732
    519 7xma:N (2.2) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36481732
    520 7xma:O (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396
    P68530    		 36481732
    521 7xmb:A (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 36481732
    522 7xmb:A (2.2) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36481732
    523 7xmb:B (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396
    P68530    		 36481732
    524 7xmb:N (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 36481732
    525 7xmb:N (2.2) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36481732
    526 7xmb:O (2.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00396
    P68530    		 36481732
    527 7y44:A (1.9) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 24813624
    528 7y44:A (1.9) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 24813624
    529 7y44:N (1.9) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 24813624
    530 7y44:N (1.9) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 24813624
    531 7y44:O (1.9) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 24813624
    532 7ypy:A (1.5) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    533 7ypy:A (1.5) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    534 7ypy:B (1.5) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 27605664
    535 7ypy:N (1.5) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    536 7ypy:N (1.5) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 27605664
    537 7ypy:O (1.5) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 27605664
    538 7z10:a (3.87) BS02 HEA 7.1.1.9 GO:0004129 ... P00401 35839926
    539 7z10:a (3.87) BS03 HEA 7.1.1.9 GO:0004129 ... P00401 35839926
    540 7z10:b (3.87) BS01 HEA 7.1.1.9 GO:0004129 ... P00410 35839926
    541 8b6h:DA (2.6) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    542 8b6h:DA (2.6) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    543 8b6h:DB (2.6) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y9 36949187
    544 8b6h:Da (2.6) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    545 8b6h:Da (2.6) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    546 8bqs:DA (2.9) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 N/A
    547 8bqs:DA (2.9) BS03 HEA 7.1.1.9 GO:0004129 ... Q950Y4 N/A
    548 8bqs:DB (2.9) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y9 N/A
    549 8bqs:Da (2.9) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 N/A
    550 8bqs:Da (2.9) BS03 HEA 7.1.1.9 GO:0004129 ... Q950Y4 N/A
    551 8c8q:A (3.36) BS01 HEA 7.1.1.9 GO:0004129 ... P07657 36797353
    552 8c8q:A (3.36) BS02 HEA 7.1.1.9 GO:0004129 ... P07657 36797353
    553 8d4t:N (3.1) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 35858451
    554 8d4t:N (3.1) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 35858451
    555 8d4t:O (3.1) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 35858451
    556 8dh6:a (2.94) BS03 HEA 7.1.1.9 GO:0004129 ... P00401 N/A
    557 8dh6:a (2.94) BS04 HEA 7.1.1.9 GO:0004129 ... P00401 N/A
    558 8dh6:b (2.94) BS01 HEA 7.1.1.9 GO:0004129 ... P00410 N/A
    559 8e7s:K (3.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00401 37188665
    560 8e7s:K (3.2) BS04 HEA 7.1.1.9 GO:0004129 ... P00401 37188665
    561 8e7s:P (3.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00410 37188665
    562 8e7s:k (3.2) BS03 HEA 7.1.1.9 GO:0004129 ... P00401 37188665
    563 8e7s:k (3.2) BS04 HEA 7.1.1.9 GO:0004129 ... P00401 37188665
    564 8e7s:p (3.2) BS01 HEA 7.1.1.9 GO:0004129 ... P00410 37188665
    565 8ec0:K (3.3) BS02 HEA 7.1.1.9 GO:0004129 ... P00401 37188665
    566 8ec0:K (3.3) BS03 HEA 7.1.1.9 GO:0004129 ... P00401 37188665
    567 8gbt:A (2.8) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 37695261
    568 8gbt:A (2.8) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 37695261
    569 8gbt:N (2.8) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 37695261
    570 8gbt:N (2.8) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 37695261
    571 8gbt:O (2.8) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 37695261
    572 8gcq:A (2.38) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 37717031
    573 8gcq:A (2.38) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 37717031
    574 8gcq:B (2.38) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 37717031
    575 8gcq:N (2.38) BS03 HEA 7.1.1.9 GO:0004129 ... P00396 37717031
    576 8gcq:N (2.38) BS04 HEA 7.1.1.9 GO:0004129 ... P00396 37717031
    577 8gvm:A (1.851) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 30077971
    578 8gvm:A (1.851) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 30077971
    579 8gvm:B (1.851) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 30077971
    580 8gvm:N (1.851) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 30077971
    581 8gvm:N (1.851) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 30077971
    582 8gvm:O (1.851) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 30077971
    583 8gym:C1 (2.96) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    584 8gym:C1 (2.96) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    585 8gym:C2 (2.96) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y9 37248254
    586 8gym:c1 (2.96) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    587 8gym:c1 (2.96) BS03 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    588 8gym:c2 (2.96) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y9 37248254
    589 8gzu:26 (4.18) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    590 8gzu:26 (4.18) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    591 8gzu:81 (4.18) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    592 8gzu:81 (4.18) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    593 8gzu:C1 (4.18) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    594 8gzu:C1 (4.18) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    595 8gzu:c1 (4.18) BS01 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    596 8gzu:c1 (4.18) BS02 HEA 7.1.1.9 GO:0004129 ... Q950Y4 37248254
    597 8h8r:A (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    598 8h8r:A (1.7) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    599 8h8r:B (1.7) BS01 HEA 7.1.1.9 GO:0004129 ... P68530 36708913
    600 8h8r:N (1.7) BS02 HEA 7.1.1.9 GO:0004129 ... P00396 36708913
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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