Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 780 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 2 3 4 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 2j3u:B (2.15) BS01 GLA ? N/A Q15485 17215869
    202 2j3u:C (2.15) BS01 GLA ? N/A Q15485 17215869
    203 2j3u:E (2.15) BS01 GLA ? N/A Q15485 17215869
    204 2j3u:F (2.15) BS01 GLA ? N/A Q15485 17215869
    205 2p1s:A (1.93) BS03 GLA 3.4.21.- GO:0005576 ... P24627 N/A
    206 2vxj:A (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    207 2vxj:B (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    208 2vxj:C (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    209 2vxj:D (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    210 2vxj:E (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    211 2vxj:F (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    212 2vxj:G (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    213 2vxj:H (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    214 2vxj:I (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    215 2vxj:J (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    216 2vxj:K (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    217 2vxj:L (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    218 2vxj:M (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    219 2vxj:N (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    220 2vxj:O (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    221 2vxj:P (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    222 2vxj:Q (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    223 2vxj:R (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    224 2vxj:S (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    225 2vxj:T (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    226 2vxj:U (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    227 2vxj:V (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    228 2vxj:W (1.9) BS03 GLA ? GO:0005737 ... Q05097 18762193
    229 2vxj:X (1.9) BS02 GLA ? GO:0005737 ... Q05097 18762193
    230 2wmj:A (2.0) BS03 GLA N/A GO:0005975 ... N/A 19608744
    231 2wmj:B (2.0) BS03 GLA N/A GO:0005975 ... N/A 19608744
    232 2wyf:A (2.4) BS02 GLA ? GO:0005737 ... Q05097 20410292 PDBbind: -logKd/Ki=4.43, Kd=37uM
    233 2wyf:B (2.4) BS02 GLA ? GO:0005737 ... Q05097 20410292
    234 2wyf:C (2.4) BS02 GLA ? GO:0005737 ... Q05097 20410292
    235 2wyf:D (2.4) BS01 GLA ? GO:0005737 ... Q05097 20410292
    236 2wyf:E (2.4) BS02 GLA ? GO:0005737 ... Q05097 20410292
    237 2wyf:F (2.4) BS01 GLA ? GO:0005737 ... Q05097 20410292
    238 2wyf:G (2.4) BS01 GLA ? GO:0005737 ... Q05097 20410292
    239 2wyf:H (2.4) BS01 GLA ? GO:0005737 ... Q05097 20410292
    240 2xn2:A (1.58) BS01 GLA 3.2.1.22 GO:0004553 ... G1UB44 21827767
    241 2yb7:A (1.7) BS01 GLA N/A N/A N/A 21454512
    242 2yb7:B (1.7) BS01 GLA N/A N/A N/A 21454512
    243 2yfo:A (1.35) BS01 GLA 2.7.-.-
    3.2.1.22    		 GO:0004553 ... G4T4R7 21931163
    244 2yg0:A (1.8) BS01 GLA N/A N/A N/A 21454512
    245 2ygm:A (2.35) BS03 GLA ? N/A C1CB04 21767550
    246 2ygm:B (2.35) BS03 GLA ? N/A C1CB04 21767550
    247 2zmk:A (2.5) BS01 GLA ? GO:0030246 ... O24313 18566508
    248 2zmk:B (2.5) BS01 GLA ? GO:0030246 ... O24313 18566508
    249 2zmk:C (2.5) BS01 GLA ? GO:0030246 ... O24313 18566508
    250 2zmk:D (2.5) BS01 GLA ? GO:0030246 ... O24313 18566508
    251 2zml:A (2.65) BS01 GLA ? GO:0030246 ... O24313 18566508
    252 2zml:B (2.65) BS01 GLA ? GO:0030246 ... O24313 18566508
    253 2zml:C (2.65) BS01 GLA ? GO:0030246 ... O24313 18566508
    254 2zml:D (2.65) BS01 GLA ? GO:0030246 ... O24313 18566508
    255 2zmn:A (2.9) BS01 GLA ? GO:0030246 ... O24313 18566508
    256 2zmn:B (2.9) BS01 GLA ? GO:0030246 ... O24313 18566508
    257 2zmn:C (2.9) BS01 GLA ? GO:0030246 ... O24313 18566508
    258 2zmn:D (2.9) BS01 GLA ? GO:0030246 ... O24313 18566508
    259 2zx3:A (2.1) BS01 GLA ? GO:0001674 ... P86179 19524596
    260 2zx3:A (2.1) BS02 GLA ? GO:0001674 ... P86179 19524596
    261 2zx3:B (2.1) BS01 GLA ? GO:0001674 ... P86179 19524596
    262 2zx3:B (2.1) BS02 GLA ? GO:0001674 ... P86179 19524596
    263 2zx4:A (2.7) BS02 GLA ? GO:0001674 ... P86179 19524596
    264 2zx4:A (2.7) BS04 GLA ? GO:0001674 ... P86179 19524596
    265 2zx4:B (2.7) BS01 GLA ? GO:0001674 ... P86179 19524596
    266 2zx4:B (2.7) BS03 GLA ? GO:0001674 ... P86179 19524596
    267 3agv:A (2.15) BS03 GLA ? N/A P01857 20675355
    268 3alt:A (2.5) BS01 GLA ? GO:0038023 ... Q7M4F9 21247895
    269 3alt:B (2.5) BS01 GLA ? GO:0038023 ... Q7M4F9 21247895
    270 3alt:C (2.5) BS01 GLA ? GO:0038023 ... Q7M4F9 21247895
    271 3alt:D (2.5) BS01 GLA ? GO:0038023 ... Q7M4F9 21247895
    272 3alu:A (1.65) BS01 GLA ? GO:0038023 ... Q7M4F9 21247895
    273 3alu:B (1.65) BS01 GLA ? GO:0038023 ... Q7M4F9 21247895
    274 3alu:C (1.65) BS01 GLA ? GO:0038023 ... Q7M4F9 21247895
    275 3alu:D (1.65) BS01 GLA ? GO:0038023 ... Q7M4F9 21247895
    276 3ca1:A (1.55) BS01 GLA 3.2.2.22 N/A P33183 18798567
    277 3ca1:A (1.55) BS02 GLA 3.2.2.22 N/A P33183 18798567
    278 3ef2:A (1.8) BS02 GLA ? GO:0046872 ... Q8X123 19426740
    279 3ef2:A (1.8) BS04 GLA ? GO:0046872 ... Q8X123 19426740
    280 3ef2:A (1.8) BS05 GLA ? GO:0046872 ... Q8X123 19426740
    281 3ef2:A (1.8) BS06 GLA ? GO:0046872 ... Q8X123 19426740
    282 3ef2:B (1.8) BS02 GLA ? GO:0046872 ... Q8X123 19426740
    283 3ef2:B (1.8) BS04 GLA ? GO:0046872 ... Q8X123 19426740
    284 3ef2:B (1.8) BS05 GLA ? GO:0046872 ... Q8X123 19426740
    285 3ef2:B (1.8) BS06 GLA ? GO:0046872 ... Q8X123 19426740
    286 3ef2:C (1.8) BS02 GLA ? GO:0046872 ... Q8X123 19426740
    287 3ef2:C (1.8) BS04 GLA ? GO:0046872 ... Q8X123 19426740
    288 3ef2:C (1.8) BS05 GLA ? GO:0046872 ... Q8X123 19426740
    289 3ef2:C (1.8) BS06 GLA ? GO:0046872 ... Q8X123 19426740
    290 3ef2:D (1.8) BS02 GLA ? GO:0046872 ... Q8X123 19426740
    291 3ef2:D (1.8) BS04 GLA ? GO:0046872 ... Q8X123 19426740
    292 3ef2:D (1.8) BS05 GLA ? GO:0046872 ... Q8X123 19426740
    293 3ef2:D (1.8) BS06 GLA ? GO:0046872 ... Q8X123 19426740
    294 3gxp:A (2.2) BS01 GLA 3.2.1.22 GO:0003824 ... P06280 19374450
    295 3gxp:B (2.2) BS01 GLA 3.2.1.22 GO:0003824 ... P06280 19374450
    296 3h55:A (1.91) BS01 GLA 3.2.1.49 GO:0004553 ... P17050 19683538
    297 3h55:A (1.91) BS02 GLA 3.2.1.49 GO:0004553 ... P17050 19683538
    298 3h55:B (1.91) BS01 GLA 3.2.1.49 GO:0004553 ... P17050 19683538
    299 3h55:B (1.91) BS02 GLA 3.2.1.49 GO:0004553 ... P17050 19683538
    300 3hg3:A (1.9) BS02 GLA 3.2.1.22 GO:0003824 ... P06280 19940122
    301 3hg3:B (1.9) BS02 GLA 3.2.1.22 GO:0003824 ... P06280 19940122
    302 3hg5:A (2.3) BS01 GLA 3.2.1.22 GO:0003824 ... P06280 19940122
    303 3hg5:B (2.3) BS01 GLA 3.2.1.22 GO:0003824 ... P06280 19940122
    304 3hn1:A (2.1) BS03 GLA 3.4.24.68 GO:0005576 ... P04958 19602728
    305 3ilf:A (1.8) BS01 GLA 3.2.1.178 GO:0004553 ... D7GXG0 20376150
    306 3lih:A (2.2) BS03 GLA ? GO:0004553 ... Q1W3Z7 20466731
    307 3lrl:A (2.4) BS02 GLA 3.2.1.22 GO:0004553 ... P04824 20592022
    308 3lrm:A (2.7) BS02 GLA 3.2.1.22 GO:0004553 ... P04824 20592022
    309 3lrm:B (2.7) BS03 GLA 3.2.1.22 GO:0004553 ... P04824 20592022
    310 3lrm:C (2.7) BS03 GLA 3.2.1.22 GO:0004553 ... P04824 20592022
    311 3lrm:D (2.7) BS02 GLA 3.2.1.22 GO:0004553 ... P04824 20592022
    312 3lxa:A (3.04) BS01 GLA 3.2.1.22 GO:0003824 ... P06280 20444686
    313 3lxa:A (3.04) BS02 GLA 3.2.1.22 GO:0003824 ... P06280 20444686
    314 3lxa:B (3.04) BS01 GLA 3.2.1.22 GO:0003824 ... P06280 20444686
    315 3lxa:B (3.04) BS02 GLA 3.2.1.22 GO:0003824 ... P06280 20444686
    316 3n36:A (2.3) BS03 GLA ? GO:0030246 ... P16404 21358053
    317 3p5g:A (1.6027) BS02 GLA ? N/A Q9UJ71 21112338
    318 3p5g:B (1.6027) BS02 GLA ? N/A Q9UJ71 21112338
    319 3r4z:A (1.55) BS01 GLA 3.2.1.- GO:0004553 ... Q21HB2 21810409
    320 3r4z:A (1.55) BS02 GLA 3.2.1.- GO:0004553 ... Q21HB2 21810409
    321 3r4z:B (1.55) BS01 GLA 3.2.1.- GO:0004553 ... Q21HB2 21810409
    322 3r4z:B (1.55) BS02 GLA 3.2.1.- GO:0004553 ... Q21HB2 21810409
    323 3s5z:A (2.001) BS01 GLA 3.2.1.22 GO:0003824 ... P06280 22195554 MOAD: Ki=16mM
    324 3s5z:B (2.001) BS01 GLA 3.2.1.22 GO:0003824 ... P06280 22195554 MOAD: Ki=16mM
    325 3th0:A (1.75) BS03 GLA 3.2.1.- N/A P12528 23292517 PDBbind: -logKd/Ki=4.12, Kd=75.8uM
    326 3tty:A (2.25) BS02 GLA N/A GO:0004565 ... N/A 22385475
    327 3tty:B (2.25) BS02 GLA N/A GO:0004565 ... N/A 22385475
    328 3tty:C (2.25) BS02 GLA N/A GO:0004565 ... N/A 22385475
    329 3tty:D (2.25) BS02 GLA N/A GO:0004565 ... N/A 22385475
    330 3tty:E (2.25) BS02 GLA N/A GO:0004565 ... N/A 22385475
    331 3tty:F (2.25) BS02 GLA N/A GO:0004565 ... N/A 22385475
    332 3v2u:C (2.105) BS01 GLA ? GO:0000435 ... P13045 22302941
    333 3v2u:D (2.105) BS01 GLA ? GO:0000435 ... P13045 22302941
    334 3w7u:A (1.99) BS02 GLA 3.2.1.- GO:0004555 ... P42592 18586271
    335 3w7u:B (1.99) BS02 GLA 3.2.1.- GO:0004555 ... P42592 18586271
    336 3w7w:A (2.0) BS01 GLA 3.2.1.- GO:0004555 ... P42592 23826932
    337 3w7w:B (2.0) BS01 GLA 3.2.1.- GO:0004555 ... P42592 23826932
    338 3w7x:A (2.7) BS01 GLA 3.2.1.- GO:0004555 ... P42592 23826932
    339 3w7x:B (2.7) BS01 GLA 3.2.1.- GO:0004555 ... P42592 23826932
    340 3wmp:D (2.0) BS01 GLA ? GO:0007155 ... A4CYJ6 26022515
    341 3wmp:F (2.0) BS01 GLA ? GO:0007155 ... A4CYJ6 26022515
    342 3zwe:C (1.75) BS02 GLA ? N/A Q0B4G1 22170069
    343 4al9:A (1.75) BS02 GLA ? GO:0005737 ... Q05097 24123124
    344 4al9:B (1.75) BS02 GLA ? GO:0005737 ... Q05097 24123124
    345 4al9:C (1.75) BS02 GLA ? GO:0005737 ... Q05097 24123124
    346 4al9:D (1.75) BS02 GLA ? GO:0005737 ... Q05097 24123124
    347 4al9:E (1.75) BS02 GLA ? GO:0005737 ... Q05097 24123124
    348 4al9:F (1.75) BS01 GLA ? GO:0005737 ... Q05097 24123124
    349 4al9:G (1.75) BS02 GLA ? GO:0005737 ... Q05097 24123124
    350 4al9:H (1.75) BS01 GLA ? GO:0005737 ... Q05097 24123124
    351 4aw7:A (1.33) BS01 GLA 3.2.1.178 N/A B5CY96 23150581
    352 4cov:A (1.5) BS02 GLA ? N/A Q6FX55 26105055
    353 4d6g:A (1.24) BS01 GLA N/A GO:0005975 ... N/A 25870881
    354 4fnt:B (2.6) BS02 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    355 4fnt:C (2.6) BS03 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    356 4fnt:D (2.6) BS02 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    357 4fnu:A (3.6) BS01 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    358 4fnu:A (3.6) BS02 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    359 4fnu:B (3.6) BS01 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    360 4fnu:B (3.6) BS02 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    361 4fnu:C (3.6) BS01 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    362 4fnu:C (3.6) BS02 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    363 4fnu:D (3.6) BS01 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    364 4fnu:D (3.6) BS02 GLA 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371
    365 4i4u:A (1.57) BS01 GLA ? N/A R4GRU5 23213111
    366 4i4u:A (1.57) BS02 GLA ? N/A R4GRU5 23213111
    367 4i4u:A (1.57) BS03 GLA ? N/A R4GRU5 23213111
    368 4i4u:B (1.57) BS01 GLA ? N/A R4GRU5 23213111
    369 4i4u:B (1.57) BS02 GLA ? N/A R4GRU5 23213111
    370 4i4u:D (1.57) BS01 GLA ? N/A R4GRU5 23213111
    371 4i4u:D (1.57) BS02 GLA ? N/A R4GRU5 23213111
    372 4i4u:D (1.57) BS03 GLA ? N/A R4GRU5 23213111
    373 4ndv:A (1.3) BS01 GLA ? GO:0005534 ... A7UNK4 25504801
    374 4r6o:A (1.6) BS05 GLA ? GO:0005575 ... P18670 25664742
    375 4r6o:C (1.6) BS05 GLA ? GO:0005575 ... P18670 25664742
    376 4r6o:E (1.6) BS05 GLA ? GO:0005575 ... P18670 25664742
    377 4r6o:G (1.6) BS05 GLA ? GO:0005575 ... P18670 25664742
    378 4r6q:A (1.6) BS05 GLA ? GO:0005575 ... P18670 25664742
    379 4r6q:C (1.6) BS05 GLA ? GO:0005575 ... P18670 25664742
    380 4r6q:E (1.6) BS05 GLA ? GO:0005575 ... P18670 25664742
    381 4r6q:G (1.6) BS05 GLA ? GO:0005575 ... P18670 25664742
    382 4rk9:A (2.15) BS02 GLA ? GO:0055085 ... Q65LL6 N/A
    383 4rk9:A (2.15) BS03 GLA ? GO:0055085 ... Q65LL6 N/A
    384 4rk9:B (2.15) BS02 GLA ? GO:0055085 ... Q65LL6 N/A
    385 4rk9:B (2.15) BS03 GLA ? GO:0055085 ... Q65LL6 N/A
    386 4ucf:A (1.94) BS01 GLA N/A GO:0004565 ... N/A 27685756 MOAD: Ki=5.9mM
    387 4ucf:A (1.94) BS02 GLA N/A GO:0004565 ... N/A 27685756 MOAD: Ki=5.9mM
    388 4ucf:B (1.94) BS01 GLA N/A GO:0004565 ... N/A 27685756 MOAD: Ki=5.9mM
    389 4ucf:C (1.94) BS01 GLA N/A GO:0004565 ... N/A 27685756 MOAD: Ki=5.9mM
    390 4uoz:A (2.3) BS01 GLA N/A GO:0004565 ... N/A 25287704
    391 4uoz:B (2.3) BS01 GLA N/A GO:0004565 ... N/A 25287704
    392 4uoz:C (2.3) BS01 GLA N/A GO:0004565 ... N/A 25287704
    393 4xps:A (2.1) BS01 GLA 3.2.1.22 GO:0003824 ... A0A0F7R6D6 25942325
    394 4z3e:A (1.8) BS02 GLA ? GO:0007155 ... A0A182DW20 28076665
    395 4z3f:A (1.8) BS02 GLA ? GO:0007155 ... A0A182DW20 28076665
    396 4z3g:A (1.45) BS02 GLA ? GO:0007155 ... A0A182DW20 28076665
    397 4z3g:B (1.45) BS02 GLA ? GO:0007155 ... A0A182DW20 28076665
    398 4z3h:A (1.5) BS02 GLA ? GO:0007155 ... A0A182DW20 28076665
    399 4zfw:B (2.54) BS01 GLA 3.2.2.22 N/A B7X8M2 26648038
    400 4zs9:A (1.37) BS03 GLA ? GO:0015768 ... A0A1A9TA69 27502277
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218