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BioLiP
Download all results in tab-seperated text for 26 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1ab8:A (2.2) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 9069282
    2 1ab8:A (2.2) BS02 FOK 4.6.1.1 GO:0009190 ... P26769 9069282
    3 1ab8:B (2.2) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 9069282
    4 1ab8:B (2.2) BS02 FOK 4.6.1.1 GO:0009190 ... P26769 9069282
    5 1cjt:A (2.8) BS03 FOK 4.6.1.1 GO:0009190 ... P30803 10427002
    6 1cjt:B (2.8) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 10427002
    7 1cju:A (2.8) BS03 FOK 4.6.1.1 GO:0009190 ... P30803 10427002
    8 1cjv:A (3.0) BS02 FOK 4.6.1.1 GO:0009190 ... P30803 10427002
    9 1cs4:A (2.5) BS02 FOK 4.6.1.1 GO:0009190 ... P30803 11087399
    10 1cs4:B (2.5) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 11087399
    11 1cul:A (2.4) BS02 FOK 4.6.1.1 GO:0009190 ... P30803 11087399
    12 1cul:B (2.4) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 11087399
    13 1tl7:A (2.8) BS03 FOK 4.6.1.1 GO:0009190 ... P30803 15591060
    14 1tl7:B (2.8) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 15591060
    15 1u0h:A (2.9) BS03 FOK 4.6.1.1 GO:0009190 ... P30803 15591060
    16 3c14:A (2.68) BS01 FOK 4.6.1.1 GO:0009190 ... P30803 19243146
    17 3c14:B (2.68) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 19243146
    18 3c15:A (2.78) BS02 FOK 4.6.1.1 GO:0009190 ... P30803 19243146
    19 3c15:B (2.78) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 19243146
    20 3c16:A (2.87) BS03 FOK 4.6.1.1 GO:0009190 ... P30803 19243146
    21 3c16:B (2.87) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 19243146
    22 3g82:A (3.11) BS03 FOK 4.6.1.1 GO:0009190 ... P30803 N/A
    23 3g82:B (3.11) BS01 FOK 4.6.1.1 GO:0009190 ... P26769 N/A
    24 6r4o:A (4.2) BS02 FOK 4.6.1.1 GO:0001701 ... E1BM79 31023924
    25 8buz:A (3.5) BS01 FOK 4.6.1.1 GO:0004016 ... E1BQ12 38351373
    26 8bv5:A (3.54) BS01 FOK 4.6.1.1 GO:0004016 ... E1BQ12 38351373
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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