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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    47201 8wm6:B (2.7) BS47 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    47202 8wm6:B (2.7) BS53 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    47203 8wm6:B (2.7) BS55 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    47204 8wm6:F (2.7) BS01 CLA ? N/A A6MVU7 38734819
    47205 8wm6:F (2.7) BS02 CLA ? N/A A6MVU7 38734819
    47206 8wm6:F (2.7) BS03 CLA ? N/A A6MVU7 38734819
    47207 8wm6:F (2.7) BS04 CLA ? N/A A6MVU7 38734819
    47208 8wm6:F (2.7) BS05 CLA ? N/A A6MVU7 38734819
    47209 8wm6:F (2.7) BS06 CLA ? N/A A6MVU7 38734819
    47210 8wm6:F (2.7) BS07 CLA ? N/A A6MVU7 38734819
    47211 8wm6:F (2.7) BS10 CLA ? N/A A6MVU7 38734819
    47212 8wm6:I (2.7) BS01 CLA ? GO:0009507 ... A6MVV1 38734819
    47213 8wm6:I (2.7) BS02 CLA ? GO:0009507 ... A6MVV1 38734819
    47214 8wm6:I (2.7) BS03 CLA ? GO:0009507 ... A6MVV1 38734819
    47215 8wm6:I (2.7) BS04 CLA ? GO:0009507 ... A6MVV1 38734819
    47216 8wm6:I (2.7) BS06 CLA ? GO:0009507 ... A6MVV1 38734819
    47217 8wm6:J (2.7) BS01 CLA ? GO:0009507 ... A6MVU6 38734819
    47218 8wm6:J (2.7) BS02 CLA ? GO:0009507 ... A6MVU6 38734819
    47219 8wm6:J (2.7) BS03 CLA ? GO:0009507 ... A6MVU6 38734819
    47220 8wm6:J (2.7) BS04 CLA ? GO:0009507 ... A6MVU6 38734819
    47221 8wm6:J (2.7) BS05 CLA ? GO:0009507 ... A6MVU6 38734819
    47222 8wm6:J (2.7) BS07 CLA ? GO:0009507 ... A6MVU6 38734819
    47223 8wm6:J (2.7) BS09 CLA ? GO:0009507 ... A6MVU6 38734819
    47224 8wm6:J (2.7) BS10 CLA ? GO:0009507 ... A6MVU6 38734819
    47225 8wm6:K (2.7) BS01 CLA ? GO:0009507 ... A6MVS9 38734819
    47226 8wm6:K (2.7) BS02 CLA ? GO:0009507 ... A6MVS9 38734819
    47227 8wm6:K (2.7) BS03 CLA ? GO:0009507 ... A6MVS9 38734819
    47228 8wm6:K (2.7) BS05 CLA ? GO:0009507 ... A6MVS9 38734819
    47229 8wm6:K (2.7) BS07 CLA ? GO:0009507 ... A6MVS9 38734819
    47230 8wm6:K (2.7) BS08 CLA ? GO:0009507 ... A6MVS9 38734819
    47231 8wm6:L (2.7) BS01 CLA ? GO:0009507 ... A6MVV8 38734819
    47232 8wm6:L (2.7) BS02 CLA ? GO:0009507 ... A6MVV8 38734819
    47233 8wm6:L (2.7) BS03 CLA ? GO:0009507 ... A6MVV8 38734819
    47234 8wm6:L (2.7) BS04 CLA ? GO:0009507 ... A6MVV8 38734819
    47235 8wm6:L (2.7) BS05 CLA ? GO:0009507 ... A6MVV8 38734819
    47236 8wm6:L (2.7) BS06 CLA ? GO:0009507 ... A6MVV8 38734819
    47237 8wm6:L (2.7) BS07 CLA ? GO:0009507 ... A6MVV8 38734819
    47238 8wm6:L (2.7) BS09 CLA ? GO:0009507 ... A6MVV8 38734819
    47239 8wm6:L (2.7) BS10 CLA ? GO:0009507 ... A6MVV8 38734819
    47240 8wm6:L (2.7) BS11 CLA ? GO:0009507 ... A6MVV8 38734819
    47241 8wm6:L (2.7) BS13 CLA ? GO:0009507 ... A6MVV8 38734819
    47242 8wm6:L (2.7) BS14 CLA ? GO:0009507 ... A6MVV8 38734819
    47243 8wm6:L (2.7) BS15 CLA ? GO:0009507 ... A6MVV8 38734819
    47244 8wm6:M (2.7) BS01 CLA ? GO:0009507 ... A6MVT4 38734819
    47245 8wm6:O (2.7) BS01 CLA N/A N/A N/A 38734819
    47246 8wm6:O (2.7) BS02 CLA N/A N/A N/A 38734819
    47247 8wm6:O (2.7) BS03 CLA N/A N/A N/A 38734819
    47248 8wm6:O (2.7) BS04 CLA N/A N/A N/A 38734819
    47249 8wm6:O (2.7) BS05 CLA N/A N/A N/A 38734819
    47250 8wm6:O (2.7) BS08 CLA N/A N/A N/A 38734819
    47251 8wm6:O (2.7) BS09 CLA N/A N/A N/A 38734819
    47252 8wm6:Q (2.7) BS01 CLA N/A N/A N/A 38734819
    47253 8wm6:Q (2.7) BS02 CLA N/A N/A N/A 38734819
    47254 8wm6:Q (2.7) BS03 CLA N/A N/A N/A 38734819
    47255 8wm6:R (2.7) BS01 CLA N/A N/A N/A 38734819
    47256 8wm6:R (2.7) BS02 CLA N/A N/A N/A 38734819
    47257 8wm6:R (2.7) BS03 CLA N/A N/A N/A 38734819
    47258 8wm6:R (2.7) BS05 CLA N/A N/A N/A 38734819
    47259 8wm6:a (2.7) BS01 CLA N/A N/A N/A 38734819
    47260 8wm6:a (2.7) BS02 CLA N/A N/A N/A 38734819
    47261 8wm6:a (2.7) BS03 CLA N/A N/A N/A 38734819
    47262 8wm6:a (2.7) BS04 CLA N/A N/A N/A 38734819
    47263 8wm6:a (2.7) BS05 CLA N/A N/A N/A 38734819
    47264 8wm6:a (2.7) BS06 CLA N/A N/A N/A 38734819
    47265 8wm6:a (2.7) BS07 CLA N/A N/A N/A 38734819
    47266 8wm6:a (2.7) BS08 CLA N/A N/A N/A 38734819
    47267 8wm6:a (2.7) BS09 CLA N/A N/A N/A 38734819
    47268 8wm6:a (2.7) BS10 CLA N/A N/A N/A 38734819
    47269 8wm6:a (2.7) BS11 CLA N/A N/A N/A 38734819
    47270 8wm6:a (2.7) BS12 CLA N/A N/A N/A 38734819
    47271 8wm6:a (2.7) BS18 CLA N/A N/A N/A 38734819
    47272 8wm6:b (2.7) BS01 CLA N/A N/A N/A 38734819
    47273 8wm6:b (2.7) BS02 CLA N/A N/A N/A 38734819
    47274 8wm6:b (2.7) BS03 CLA N/A N/A N/A 38734819
    47275 8wm6:b (2.7) BS04 CLA N/A N/A N/A 38734819
    47276 8wm6:b (2.7) BS05 CLA N/A N/A N/A 38734819
    47277 8wm6:b (2.7) BS06 CLA N/A N/A N/A 38734819
    47278 8wm6:b (2.7) BS07 CLA N/A N/A N/A 38734819
    47279 8wm6:b (2.7) BS08 CLA N/A N/A N/A 38734819
    47280 8wm6:b (2.7) BS09 CLA N/A N/A N/A 38734819
    47281 8wm6:b (2.7) BS10 CLA N/A N/A N/A 38734819
    47282 8wm6:b (2.7) BS11 CLA N/A N/A N/A 38734819
    47283 8wm6:b (2.7) BS12 CLA N/A N/A N/A 38734819
    47284 8wm6:b (2.7) BS13 CLA N/A N/A N/A 38734819
    47285 8wm6:b (2.7) BS14 CLA N/A N/A N/A 38734819
    47286 8wm6:b (2.7) BS15 CLA N/A N/A N/A 38734819
    47287 8wm6:c (2.7) BS01 CLA N/A N/A N/A 38734819
    47288 8wm6:c (2.7) BS02 CLA N/A N/A N/A 38734819
    47289 8wm6:c (2.7) BS03 CLA N/A N/A N/A 38734819
    47290 8wm6:c (2.7) BS04 CLA N/A N/A N/A 38734819
    47291 8wm6:c (2.7) BS05 CLA N/A N/A N/A 38734819
    47292 8wm6:c (2.7) BS06 CLA N/A N/A N/A 38734819
    47293 8wm6:c (2.7) BS07 CLA N/A N/A N/A 38734819
    47294 8wm6:c (2.7) BS08 CLA N/A N/A N/A 38734819
    47295 8wm6:c (2.7) BS09 CLA N/A N/A N/A 38734819
    47296 8wm6:c (2.7) BS11 CLA N/A N/A N/A 38734819
    47297 8wm6:c (2.7) BS12 CLA N/A N/A N/A 38734819
    47298 8wm6:d (2.7) BS01 CLA N/A N/A N/A 38734819
    47299 8wm6:d (2.7) BS03 CLA N/A N/A N/A 38734819
    47300 8wm6:d (2.7) BS04 CLA N/A N/A N/A 38734819
    47301 8wm6:d (2.7) BS05 CLA N/A N/A N/A 38734819
    47302 8wm6:d (2.7) BS06 CLA N/A N/A N/A 38734819
    47303 8wm6:d (2.7) BS07 CLA N/A N/A N/A 38734819
    47304 8wm6:d (2.7) BS08 CLA N/A N/A N/A 38734819
    47305 8wm6:d (2.7) BS09 CLA N/A N/A N/A 38734819
    47306 8wm6:d (2.7) BS10 CLA N/A N/A N/A 38734819
    47307 8wm6:d (2.7) BS11 CLA N/A N/A N/A 38734819
    47308 8wm6:d (2.7) BS14 CLA N/A N/A N/A 38734819
    47309 8wm6:e (2.7) BS01 CLA N/A N/A N/A 38734819
    47310 8wm6:e (2.7) BS02 CLA N/A N/A N/A 38734819
    47311 8wm6:e (2.7) BS03 CLA N/A N/A N/A 38734819
    47312 8wm6:e (2.7) BS04 CLA N/A N/A N/A 38734819
    47313 8wm6:e (2.7) BS05 CLA N/A N/A N/A 38734819
    47314 8wm6:e (2.7) BS06 CLA N/A N/A N/A 38734819
    47315 8wm6:e (2.7) BS07 CLA N/A N/A N/A 38734819
    47316 8wm6:e (2.7) BS08 CLA N/A N/A N/A 38734819
    47317 8wm6:e (2.7) BS10 CLA N/A N/A N/A 38734819
    47318 8wm6:e (2.7) BS11 CLA N/A N/A N/A 38734819
    47319 8wm6:f (2.7) BS01 CLA N/A N/A N/A 38734819
    47320 8wm6:f (2.7) BS02 CLA N/A N/A N/A 38734819
    47321 8wm6:f (2.7) BS03 CLA N/A N/A N/A 38734819
    47322 8wm6:f (2.7) BS04 CLA N/A N/A N/A 38734819
    47323 8wm6:f (2.7) BS05 CLA N/A N/A N/A 38734819
    47324 8wm6:f (2.7) BS06 CLA N/A N/A N/A 38734819
    47325 8wm6:f (2.7) BS07 CLA N/A N/A N/A 38734819
    47326 8wm6:f (2.7) BS08 CLA N/A N/A N/A 38734819
    47327 8wm6:f (2.7) BS09 CLA N/A N/A N/A 38734819
    47328 8wm6:f (2.7) BS11 CLA N/A N/A N/A 38734819
    47329 8wm6:f (2.7) BS12 CLA N/A N/A N/A 38734819
    47330 8wm6:g (2.7) BS01 CLA N/A N/A N/A 38734819
    47331 8wm6:g (2.7) BS02 CLA N/A N/A N/A 38734819
    47332 8wm6:g (2.7) BS03 CLA N/A N/A N/A 38734819
    47333 8wm6:g (2.7) BS05 CLA N/A N/A N/A 38734819
    47334 8wm6:g (2.7) BS06 CLA N/A N/A N/A 38734819
    47335 8wm6:g (2.7) BS07 CLA N/A N/A N/A 38734819
    47336 8wm6:g (2.7) BS08 CLA N/A N/A N/A 38734819
    47337 8wm6:g (2.7) BS09 CLA N/A N/A N/A 38734819
    47338 8wm6:g (2.7) BS10 CLA N/A N/A N/A 38734819
    47339 8wm6:g (2.7) BS11 CLA N/A N/A N/A 38734819
    47340 8wm6:g (2.7) BS12 CLA N/A N/A N/A 38734819
    47341 8wm6:g (2.7) BS13 CLA N/A N/A N/A 38734819
    47342 8wm6:g (2.7) BS14 CLA N/A N/A N/A 38734819
    47343 8wm6:g (2.7) BS18 CLA N/A N/A N/A 38734819
    47344 8wm6:g (2.7) BS24 CLA N/A N/A N/A 38734819
    47345 8wm6:h (2.7) BS01 CLA N/A N/A N/A 38734819
    47346 8wm6:h (2.7) BS02 CLA N/A N/A N/A 38734819
    47347 8wm6:h (2.7) BS03 CLA N/A N/A N/A 38734819
    47348 8wm6:h (2.7) BS04 CLA N/A N/A N/A 38734819
    47349 8wm6:h (2.7) BS05 CLA N/A N/A N/A 38734819
    47350 8wm6:h (2.7) BS06 CLA N/A N/A N/A 38734819
    47351 8wm6:h (2.7) BS07 CLA N/A N/A N/A 38734819
    47352 8wm6:h (2.7) BS12 CLA N/A N/A N/A 38734819
    47353 8wm6:i (2.7) BS01 CLA N/A N/A N/A 38734819
    47354 8wm6:i (2.7) BS02 CLA N/A N/A N/A 38734819
    47355 8wm6:i (2.7) BS03 CLA N/A N/A N/A 38734819
    47356 8wm6:i (2.7) BS04 CLA N/A N/A N/A 38734819
    47357 8wm6:i (2.7) BS05 CLA N/A N/A N/A 38734819
    47358 8wm6:i (2.7) BS06 CLA N/A N/A N/A 38734819
    47359 8wm6:i (2.7) BS07 CLA N/A N/A N/A 38734819
    47360 8wm6:i (2.7) BS08 CLA N/A N/A N/A 38734819
    47361 8wm6:i (2.7) BS10 CLA N/A N/A N/A 38734819
    47362 8wm6:i (2.7) BS11 CLA N/A N/A N/A 38734819
    47363 8wm6:i (2.7) BS19 CLA N/A N/A N/A 38734819
    47364 8wm6:i (2.7) BS20 CLA N/A N/A N/A 38734819
    47365 8wm6:j (2.7) BS02 CLA N/A N/A N/A 38734819
    47366 8wm6:j (2.7) BS05 CLA N/A N/A N/A 38734819
    47367 8wm6:j (2.7) BS06 CLA N/A N/A N/A 38734819
    47368 8wm6:j (2.7) BS07 CLA N/A N/A N/A 38734819
    47369 8wm6:j (2.7) BS08 CLA N/A N/A N/A 38734819
    47370 8wm6:j (2.7) BS09 CLA N/A N/A N/A 38734819
    47371 8wm6:j (2.7) BS10 CLA N/A N/A N/A 38734819
    47372 8wm6:j (2.7) BS11 CLA N/A N/A N/A 38734819
    47373 8wm6:j (2.7) BS12 CLA N/A N/A N/A 38734819
    47374 8wm6:j (2.7) BS13 CLA N/A N/A N/A 38734819
    47375 8wm6:j (2.7) BS14 CLA N/A N/A N/A 38734819
    47376 8wm6:j (2.7) BS16 CLA N/A N/A N/A 38734819
    47377 8wm6:j (2.7) BS17 CLA N/A N/A N/A 38734819
    47378 8wm6:k (2.7) BS01 CLA N/A N/A N/A 38734819
    47379 8wm6:k (2.7) BS02 CLA N/A N/A N/A 38734819
    47380 8wm6:k (2.7) BS03 CLA N/A N/A N/A 38734819
    47381 8wm6:k (2.7) BS04 CLA N/A N/A N/A 38734819
    47382 8wm6:k (2.7) BS05 CLA N/A N/A N/A 38734819
    47383 8wm6:k (2.7) BS06 CLA N/A N/A N/A 38734819
    47384 8wm6:k (2.7) BS07 CLA N/A N/A N/A 38734819
    47385 8wm6:k (2.7) BS08 CLA N/A N/A N/A 38734819
    47386 8wm6:k (2.7) BS09 CLA N/A N/A N/A 38734819
    47387 8wm6:k (2.7) BS10 CLA N/A N/A N/A 38734819
    47388 8wm6:k (2.7) BS14 CLA N/A N/A N/A 38734819
    47389 8wm6:k (2.7) BS21 CLA N/A N/A N/A 38734819
    47390 8wm6:l (2.7) BS01 CLA N/A N/A N/A 38734819
    47391 8wm6:l (2.7) BS02 CLA N/A N/A N/A 38734819
    47392 8wm6:l (2.7) BS03 CLA N/A N/A N/A 38734819
    47393 8wm6:l (2.7) BS05 CLA N/A N/A N/A 38734819
    47394 8wm6:l (2.7) BS06 CLA N/A N/A N/A 38734819
    47395 8wm6:l (2.7) BS07 CLA N/A N/A N/A 38734819
    47396 8wm6:l (2.7) BS08 CLA N/A N/A N/A 38734819
    47397 8wm6:l (2.7) BS09 CLA N/A N/A N/A 38734819
    47398 8wm6:l (2.7) BS10 CLA N/A N/A N/A 38734819
    47399 8wm6:l (2.7) BS11 CLA N/A N/A N/A 38734819
    47400 8wm6:l (2.7) BS12 CLA N/A N/A N/A 38734819
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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