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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    46801 8wey:A (1.92) BS07 CLA N/A GO:0009579 ... N/A 38442179
    46802 8wey:A (1.92) BS08 CLA N/A GO:0009579 ... N/A 38442179
    46803 8wey:A (1.92) BS09 CLA N/A GO:0009579 ... N/A 38442179
    46804 8wey:A (1.92) BS10 CLA N/A GO:0009579 ... N/A 38442179
    46805 8wey:A (1.92) BS11 CLA N/A GO:0009579 ... N/A 38442179
    46806 8wey:A (1.92) BS12 CLA N/A GO:0009579 ... N/A 38442179
    46807 8wey:A (1.92) BS13 CLA N/A GO:0009579 ... N/A 38442179
    46808 8wey:A (1.92) BS14 CLA N/A GO:0009579 ... N/A 38442179
    46809 8wey:A (1.92) BS15 CLA N/A GO:0009579 ... N/A 38442179
    46810 8wey:A (1.92) BS16 CLA N/A GO:0009579 ... N/A 38442179
    46811 8wey:A (1.92) BS17 CLA N/A GO:0009579 ... N/A 38442179
    46812 8wey:A (1.92) BS18 CLA N/A GO:0009579 ... N/A 38442179
    46813 8wey:A (1.92) BS19 CLA N/A GO:0009579 ... N/A 38442179
    46814 8wey:A (1.92) BS20 CLA N/A GO:0009579 ... N/A 38442179
    46815 8wey:A (1.92) BS21 CLA N/A GO:0009579 ... N/A 38442179
    46816 8wey:A (1.92) BS22 CLA N/A GO:0009579 ... N/A 38442179
    46817 8wey:A (1.92) BS23 CLA N/A GO:0009579 ... N/A 38442179
    46818 8wey:A (1.92) BS24 CLA N/A GO:0009579 ... N/A 38442179
    46819 8wey:A (1.92) BS25 CLA N/A GO:0009579 ... N/A 38442179
    46820 8wey:A (1.92) BS26 CLA N/A GO:0009579 ... N/A 38442179
    46821 8wey:A (1.92) BS27 CLA N/A GO:0009579 ... N/A 38442179
    46822 8wey:A (1.92) BS28 CLA N/A GO:0009579 ... N/A 38442179
    46823 8wey:A (1.92) BS29 CLA N/A GO:0009579 ... N/A 38442179
    46824 8wey:A (1.92) BS30 CLA N/A GO:0009579 ... N/A 38442179
    46825 8wey:A (1.92) BS31 CLA N/A GO:0009579 ... N/A 38442179
    46826 8wey:A (1.92) BS32 CLA N/A GO:0009579 ... N/A 38442179
    46827 8wey:A (1.92) BS33 CLA N/A GO:0009579 ... N/A 38442179
    46828 8wey:A (1.92) BS34 CLA N/A GO:0009579 ... N/A 38442179
    46829 8wey:A (1.92) BS35 CLA N/A GO:0009579 ... N/A 38442179
    46830 8wey:A (1.92) BS36 CLA N/A GO:0009579 ... N/A 38442179
    46831 8wey:A (1.92) BS37 CLA N/A GO:0009579 ... N/A 38442179
    46832 8wey:A (1.92) BS38 CLA N/A GO:0009579 ... N/A 38442179
    46833 8wey:A (1.92) BS39 CLA N/A GO:0009579 ... N/A 38442179
    46834 8wey:A (1.92) BS42 CLA N/A GO:0009579 ... N/A 38442179
    46835 8wey:A (1.92) BS43 CLA N/A GO:0009579 ... N/A 38442179
    46836 8wey:A (1.92) BS44 CLA N/A GO:0009579 ... N/A 38442179
    46837 8wey:A (1.92) BS45 CLA N/A GO:0009579 ... N/A 38442179
    46838 8wey:A (1.92) BS46 CLA N/A GO:0009579 ... N/A 38442179
    46839 8wey:A (1.92) BS47 CLA N/A GO:0009579 ... N/A 38442179
    46840 8wey:A (1.92) BS48 CLA N/A GO:0009579 ... N/A 38442179
    46841 8wey:A (1.92) BS49 CLA N/A GO:0009579 ... N/A 38442179
    46842 8wey:A (1.92) BS50 CLA N/A GO:0009579 ... N/A 38442179
    46843 8wey:A (1.92) BS51 CLA N/A GO:0009579 ... N/A 38442179
    46844 8wey:A (1.92) BS52 CLA N/A GO:0009579 ... N/A 38442179
    46845 8wey:A (1.92) BS53 CLA N/A GO:0009579 ... N/A 38442179
    46846 8wey:B (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    46847 8wey:B (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    46848 8wey:B (1.92) BS05 CLA N/A GO:0009522 ... N/A 38442179
    46849 8wey:B (1.92) BS07 CLA N/A GO:0009522 ... N/A 38442179
    46850 8wey:B (1.92) BS08 CLA N/A GO:0009522 ... N/A 38442179
    46851 8wey:B (1.92) BS09 CLA N/A GO:0009522 ... N/A 38442179
    46852 8wey:B (1.92) BS10 CLA N/A GO:0009522 ... N/A 38442179
    46853 8wey:B (1.92) BS11 CLA N/A GO:0009522 ... N/A 38442179
    46854 8wey:B (1.92) BS12 CLA N/A GO:0009522 ... N/A 38442179
    46855 8wey:B (1.92) BS13 CLA N/A GO:0009522 ... N/A 38442179
    46856 8wey:B (1.92) BS14 CLA N/A GO:0009522 ... N/A 38442179
    46857 8wey:B (1.92) BS15 CLA N/A GO:0009522 ... N/A 38442179
    46858 8wey:B (1.92) BS16 CLA N/A GO:0009522 ... N/A 38442179
    46859 8wey:B (1.92) BS17 CLA N/A GO:0009522 ... N/A 38442179
    46860 8wey:B (1.92) BS18 CLA N/A GO:0009522 ... N/A 38442179
    46861 8wey:B (1.92) BS19 CLA N/A GO:0009522 ... N/A 38442179
    46862 8wey:B (1.92) BS20 CLA N/A GO:0009522 ... N/A 38442179
    46863 8wey:B (1.92) BS21 CLA N/A GO:0009522 ... N/A 38442179
    46864 8wey:B (1.92) BS22 CLA N/A GO:0009522 ... N/A 38442179
    46865 8wey:B (1.92) BS23 CLA N/A GO:0009522 ... N/A 38442179
    46866 8wey:B (1.92) BS24 CLA N/A GO:0009522 ... N/A 38442179
    46867 8wey:B (1.92) BS25 CLA N/A GO:0009522 ... N/A 38442179
    46868 8wey:B (1.92) BS26 CLA N/A GO:0009522 ... N/A 38442179
    46869 8wey:B (1.92) BS27 CLA N/A GO:0009522 ... N/A 38442179
    46870 8wey:B (1.92) BS28 CLA N/A GO:0009522 ... N/A 38442179
    46871 8wey:B (1.92) BS29 CLA N/A GO:0009522 ... N/A 38442179
    46872 8wey:B (1.92) BS30 CLA N/A GO:0009522 ... N/A 38442179
    46873 8wey:B (1.92) BS31 CLA N/A GO:0009522 ... N/A 38442179
    46874 8wey:B (1.92) BS32 CLA N/A GO:0009522 ... N/A 38442179
    46875 8wey:B (1.92) BS33 CLA N/A GO:0009522 ... N/A 38442179
    46876 8wey:B (1.92) BS34 CLA N/A GO:0009522 ... N/A 38442179
    46877 8wey:B (1.92) BS35 CLA N/A GO:0009522 ... N/A 38442179
    46878 8wey:B (1.92) BS36 CLA N/A GO:0009522 ... N/A 38442179
    46879 8wey:B (1.92) BS37 CLA N/A GO:0009522 ... N/A 38442179
    46880 8wey:B (1.92) BS38 CLA N/A GO:0009522 ... N/A 38442179
    46881 8wey:B (1.92) BS39 CLA N/A GO:0009522 ... N/A 38442179
    46882 8wey:B (1.92) BS40 CLA N/A GO:0009522 ... N/A 38442179
    46883 8wey:B (1.92) BS41 CLA N/A GO:0009522 ... N/A 38442179
    46884 8wey:B (1.92) BS42 CLA N/A GO:0009522 ... N/A 38442179
    46885 8wey:B (1.92) BS43 CLA N/A GO:0009522 ... N/A 38442179
    46886 8wey:B (1.92) BS44 CLA N/A GO:0009522 ... N/A 38442179
    46887 8wey:B (1.92) BS45 CLA N/A GO:0009522 ... N/A 38442179
    46888 8wey:B (1.92) BS46 CLA N/A GO:0009522 ... N/A 38442179
    46889 8wey:B (1.92) BS47 CLA N/A GO:0009522 ... N/A 38442179
    46890 8wey:B (1.92) BS49 CLA N/A GO:0009522 ... N/A 38442179
    46891 8wey:B (1.92) BS50 CLA N/A GO:0009522 ... N/A 38442179
    46892 8wey:B (1.92) BS51 CLA N/A GO:0009522 ... N/A 38442179
    46893 8wey:F (1.92) BS01 CLA N/A GO:0009522 ... N/A 38442179
    46894 8wey:F (1.92) BS02 CLA N/A GO:0009522 ... N/A 38442179
    46895 8wey:F (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    46896 8wey:F (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    46897 8wey:F (1.92) BS05 CLA N/A GO:0009522 ... N/A 38442179
    46898 8wey:F (1.92) BS06 CLA N/A GO:0009522 ... N/A 38442179
    46899 8wey:F (1.92) BS07 CLA N/A GO:0009522 ... N/A 38442179
    46900 8wey:F (1.92) BS09 CLA N/A GO:0009522 ... N/A 38442179
    46901 8wey:I (1.92) BS02 CLA N/A GO:0009522 ... N/A 38442179
    46902 8wey:I (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    46903 8wey:I (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    46904 8wey:J (1.92) BS01 CLA N/A GO:0009522 ... N/A 38442179
    46905 8wey:J (1.92) BS02 CLA N/A GO:0009522 ... N/A 38442179
    46906 8wey:J (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    46907 8wey:J (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    46908 8wey:K (1.92) BS01 CLA N/A GO:0009522 ... N/A 38442179
    46909 8wey:K (1.92) BS02 CLA N/A GO:0009522 ... N/A 38442179
    46910 8wey:K (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    46911 8wey:K (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    46912 8wey:K (1.92) BS05 CLA N/A GO:0009522 ... N/A 38442179
    46913 8wey:L (1.92) BS01 CLA N/A GO:0009522 ... N/A 38442179
    46914 8wey:L (1.92) BS02 CLA N/A GO:0009522 ... N/A 38442179
    46915 8wey:L (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    46916 8wey:L (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    46917 8wey:L (1.92) BS05 CLA N/A GO:0009522 ... N/A 38442179
    46918 8wey:L (1.92) BS06 CLA N/A GO:0009522 ... N/A 38442179
    46919 8wey:O (1.92) BS01 CLA N/A N/A N/A 38442179
    46920 8wey:O (1.92) BS02 CLA N/A N/A N/A 38442179
    46921 8wey:O (1.92) BS03 CLA N/A N/A N/A 38442179
    46922 8wey:O (1.92) BS04 CLA N/A N/A N/A 38442179
    46923 8wgh:1 (2.4) BS02 CLA N/A N/A N/A 39060282
    46924 8wgh:1 (2.4) BS03 CLA N/A N/A N/A 39060282
    46925 8wgh:1 (2.4) BS04 CLA N/A N/A N/A 39060282
    46926 8wgh:1 (2.4) BS05 CLA N/A N/A N/A 39060282
    46927 8wgh:1 (2.4) BS07 CLA N/A N/A N/A 39060282
    46928 8wgh:1 (2.4) BS08 CLA N/A N/A N/A 39060282
    46929 8wgh:1 (2.4) BS09 CLA N/A N/A N/A 39060282
    46930 8wgh:1 (2.4) BS10 CLA N/A N/A N/A 39060282
    46931 8wgh:1 (2.4) BS11 CLA N/A N/A N/A 39060282
    46932 8wgh:1 (2.4) BS12 CLA N/A N/A N/A 39060282
    46933 8wgh:1 (2.4) BS13 CLA N/A N/A N/A 39060282
    46934 8wgh:1 (2.4) BS14 CLA N/A N/A N/A 39060282
    46935 8wgh:2 (2.4) BS02 CLA N/A N/A N/A 39060282
    46936 8wgh:2 (2.4) BS03 CLA N/A N/A N/A 39060282
    46937 8wgh:2 (2.4) BS04 CLA N/A N/A N/A 39060282
    46938 8wgh:2 (2.4) BS08 CLA N/A N/A N/A 39060282
    46939 8wgh:2 (2.4) BS09 CLA N/A N/A N/A 39060282
    46940 8wgh:2 (2.4) BS10 CLA N/A N/A N/A 39060282
    46941 8wgh:2 (2.4) BS11 CLA N/A N/A N/A 39060282
    46942 8wgh:2 (2.4) BS12 CLA N/A N/A N/A 39060282
    46943 8wgh:2 (2.4) BS13 CLA N/A N/A N/A 39060282
    46944 8wgh:2 (2.4) BS15 CLA N/A N/A N/A 39060282
    46945 8wgh:2 (2.4) BS16 CLA N/A N/A N/A 39060282
    46946 8wgh:3 (2.4) BS02 CLA N/A N/A N/A 39060282
    46947 8wgh:3 (2.4) BS03 CLA N/A N/A N/A 39060282
    46948 8wgh:3 (2.4) BS04 CLA N/A N/A N/A 39060282
    46949 8wgh:3 (2.4) BS05 CLA N/A N/A N/A 39060282
    46950 8wgh:3 (2.4) BS06 CLA N/A N/A N/A 39060282
    46951 8wgh:3 (2.4) BS08 CLA N/A N/A N/A 39060282
    46952 8wgh:3 (2.4) BS09 CLA N/A N/A N/A 39060282
    46953 8wgh:3 (2.4) BS10 CLA N/A N/A N/A 39060282
    46954 8wgh:3 (2.4) BS11 CLA N/A N/A N/A 39060282
    46955 8wgh:3 (2.4) BS12 CLA N/A N/A N/A 39060282
    46956 8wgh:3 (2.4) BS13 CLA N/A N/A N/A 39060282
    46957 8wgh:3 (2.4) BS14 CLA N/A N/A N/A 39060282
    46958 8wgh:3 (2.4) BS15 CLA N/A N/A N/A 39060282
    46959 8wgh:3 (2.4) BS16 CLA N/A N/A N/A 39060282
    46960 8wgh:3 (2.4) BS17 CLA N/A N/A N/A 39060282
    46961 8wgh:4 (2.4) BS02 CLA N/A N/A N/A 39060282
    46962 8wgh:4 (2.4) BS03 CLA N/A N/A N/A 39060282
    46963 8wgh:4 (2.4) BS04 CLA N/A N/A N/A 39060282
    46964 8wgh:4 (2.4) BS05 CLA N/A N/A N/A 39060282
    46965 8wgh:4 (2.4) BS06 CLA N/A N/A N/A 39060282
    46966 8wgh:4 (2.4) BS10 CLA N/A N/A N/A 39060282
    46967 8wgh:4 (2.4) BS11 CLA N/A N/A N/A 39060282
    46968 8wgh:4 (2.4) BS12 CLA N/A N/A N/A 39060282
    46969 8wgh:4 (2.4) BS13 CLA N/A N/A N/A 39060282
    46970 8wgh:4 (2.4) BS14 CLA N/A N/A N/A 39060282
    46971 8wgh:4 (2.4) BS15 CLA N/A N/A N/A 39060282
    46972 8wgh:4 (2.4) BS16 CLA N/A N/A N/A 39060282
    46973 8wgh:A (2.4) BS01 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46974 8wgh:A (2.4) BS02 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46975 8wgh:A (2.4) BS03 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46976 8wgh:A (2.4) BS04 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46977 8wgh:A (2.4) BS05 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46978 8wgh:A (2.4) BS06 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46979 8wgh:A (2.4) BS07 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46980 8wgh:A (2.4) BS08 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46981 8wgh:A (2.4) BS09 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46982 8wgh:A (2.4) BS10 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46983 8wgh:A (2.4) BS11 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46984 8wgh:A (2.4) BS12 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46985 8wgh:A (2.4) BS13 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46986 8wgh:A (2.4) BS14 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46987 8wgh:A (2.4) BS15 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46988 8wgh:A (2.4) BS16 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46989 8wgh:A (2.4) BS17 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46990 8wgh:A (2.4) BS18 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46991 8wgh:A (2.4) BS19 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46992 8wgh:A (2.4) BS20 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46993 8wgh:A (2.4) BS21 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46994 8wgh:A (2.4) BS22 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46995 8wgh:A (2.4) BS23 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46996 8wgh:A (2.4) BS24 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46997 8wgh:A (2.4) BS25 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46998 8wgh:A (2.4) BS26 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    46999 8wgh:A (2.4) BS27 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    47000 8wgh:A (2.4) BS28 CLA N/A GO:0000287 ... A0A8A0WPY6 39060282
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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