Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4401 4xk8:b (2.8) BS44 CLA 1.97.1.12 GO:0000287 ... P05311 26023133
    4402 4xk8:b (2.8) BS45 CLA 1.97.1.12 GO:0000287 ... P05311 26023133
    4403 4xk8:b (2.8) BS46 CLA 1.97.1.12 GO:0000287 ... P05311 26023133
    4404 4xk8:b (2.8) BS47 CLA 1.97.1.12 GO:0000287 ... P05311 26023133
    4405 4xk8:b (2.8) BS49 CLA 1.97.1.12 GO:0000287 ... P05311 26023133
    4406 4xk8:f (2.8) BS01 CLA ? GO:0009522 ... P12355 26023133
    4407 4xk8:f (2.8) BS02 CLA ? GO:0009522 ... P12355 26023133
    4408 4xk8:f (2.8) BS03 CLA ? GO:0009522 ... P12355 26023133
    4409 4xk8:f (2.8) BS04 CLA ? GO:0009522 ... P12355 26023133
    4410 4xk8:g (2.8) BS01 CLA ? GO:0009522 ... P12357 26023133
    4411 4xk8:g (2.8) BS02 CLA ? GO:0009522 ... P12357 26023133
    4412 4xk8:g (2.8) BS03 CLA ? GO:0009522 ... P12357 26023133
    4413 4xk8:g (2.8) BS04 CLA ? GO:0009522 ... P12357 26023133
    4414 4xk8:g (2.8) BS05 CLA ? GO:0009522 ... P12357 26023133
    4415 4xk8:h (2.8) BS01 CLA ? GO:0009522 ... C6T221 26023133
    4416 4xk8:h (2.8) BS02 CLA ? GO:0009522 ... C6T221 26023133
    4417 4xk8:i (2.8) BS01 CLA ? GO:0009522 ... P17227 26023133
    4418 4xk8:i (2.8) BS02 CLA ? GO:0009522 ... P17227 26023133
    4419 4xk8:j (2.8) BS01 CLA ? GO:0009522 ... A4GGC6 26023133
    4420 4xk8:j (2.8) BS02 CLA ? GO:0009522 ... A4GGC6 26023133
    4421 4xk8:j (2.8) BS03 CLA ? GO:0009522 ... A4GGC6 26023133
    4422 4xk8:j (2.8) BS04 CLA ? GO:0009522 ... A4GGC6 26023133
    4423 4xk8:j (2.8) BS05 CLA ? GO:0009522 ... A4GGC6 26023133
    4424 4xk8:k (2.8) BS01 CLA ? GO:0009507 ... E1C9L3 26023133
    4425 4xk8:k (2.8) BS02 CLA ? GO:0009507 ... E1C9L3 26023133
    4426 4xk8:k (2.8) BS03 CLA ? GO:0009507 ... E1C9L3 26023133
    4427 4xk8:l (2.8) BS01 CLA ? GO:0009522 ... E1C9L1 26023133
    4428 4xk8:l (2.8) BS02 CLA ? GO:0009522 ... E1C9L1 26023133
    4429 4xk8:l (2.8) BS03 CLA ? GO:0009522 ... E1C9L1 26023133
    4430 4xk8:l (2.8) BS04 CLA ? GO:0009522 ... E1C9L1 26023133
    4431 4xk8:l (2.8) BS05 CLA ? GO:0009522 ... E1C9L1 26023133
    4432 4xk8:l (2.8) BS06 CLA ? GO:0009522 ... E1C9L1 26023133
    4433 4y28:1 (2.8) BS01 CLA ? GO:0009416 ... E1C9L2 26076232
    4434 4y28:1 (2.8) BS02 CLA ? GO:0009416 ... E1C9L2 26076232
    4435 4y28:1 (2.8) BS03 CLA ? GO:0009416 ... E1C9L2 26076232
    4436 4y28:1 (2.8) BS04 CLA ? GO:0009416 ... E1C9L2 26076232
    4437 4y28:1 (2.8) BS05 CLA ? GO:0009416 ... E1C9L2 26076232
    4438 4y28:1 (2.8) BS06 CLA ? GO:0009416 ... E1C9L2 26076232
    4439 4y28:1 (2.8) BS07 CLA ? GO:0009416 ... E1C9L2 26076232
    4440 4y28:1 (2.8) BS08 CLA ? GO:0009416 ... E1C9L2 26076232
    4441 4y28:1 (2.8) BS11 CLA ? GO:0009416 ... E1C9L2 26076232
    4442 4y28:1 (2.8) BS12 CLA ? GO:0009416 ... E1C9L2 26076232
    4443 4y28:1 (2.8) BS13 CLA ? GO:0009416 ... E1C9L2 26076232
    4444 4y28:1 (2.8) BS14 CLA ? GO:0009416 ... E1C9L2 26076232
    4445 4y28:2 (2.8) BS01 CLA ? GO:0009416 ... Q41038 26076232
    4446 4y28:2 (2.8) BS02 CLA ? GO:0009416 ... Q41038 26076232
    4447 4y28:2 (2.8) BS03 CLA ? GO:0009416 ... Q41038 26076232
    4448 4y28:2 (2.8) BS04 CLA ? GO:0009416 ... Q41038 26076232
    4449 4y28:2 (2.8) BS05 CLA ? GO:0009416 ... Q41038 26076232
    4450 4y28:2 (2.8) BS06 CLA ? GO:0009416 ... Q41038 26076232
    4451 4y28:2 (2.8) BS07 CLA ? GO:0009416 ... Q41038 26076232
    4452 4y28:2 (2.8) BS08 CLA ? GO:0009416 ... Q41038 26076232
    4453 4y28:2 (2.8) BS11 CLA ? GO:0009416 ... Q41038 26076232
    4454 4y28:2 (2.8) BS13 CLA ? GO:0009416 ... Q41038 26076232
    4455 4y28:2 (2.8) BS14 CLA ? GO:0009416 ... Q41038 26076232
    4456 4y28:2 (2.8) BS15 CLA ? GO:0009416 ... Q41038 26076232
    4457 4y28:3 (2.8) BS01 CLA ? GO:0009416 ... Q32904 26076232
    4458 4y28:3 (2.8) BS02 CLA ? GO:0009416 ... Q32904 26076232
    4459 4y28:3 (2.8) BS03 CLA ? GO:0009416 ... Q32904 26076232
    4460 4y28:3 (2.8) BS04 CLA ? GO:0009416 ... Q32904 26076232
    4461 4y28:3 (2.8) BS05 CLA ? GO:0009416 ... Q32904 26076232
    4462 4y28:3 (2.8) BS06 CLA ? GO:0009416 ... Q32904 26076232
    4463 4y28:3 (2.8) BS07 CLA ? GO:0009416 ... Q32904 26076232
    4464 4y28:3 (2.8) BS08 CLA ? GO:0009416 ... Q32904 26076232
    4465 4y28:3 (2.8) BS09 CLA ? GO:0009416 ... Q32904 26076232
    4466 4y28:3 (2.8) BS10 CLA ? GO:0009416 ... Q32904 26076232
    4467 4y28:3 (2.8) BS11 CLA ? GO:0009416 ... Q32904 26076232
    4468 4y28:3 (2.8) BS12 CLA ? GO:0009416 ... Q32904 26076232
    4469 4y28:3 (2.8) BS14 CLA ? GO:0009416 ... Q32904 26076232
    4470 4y28:3 (2.8) BS15 CLA ? GO:0009416 ... Q32904 26076232
    4471 4y28:3 (2.8) BS16 CLA ? GO:0009416 ... Q32904 26076232
    4472 4y28:3 (2.8) BS17 CLA ? GO:0009416 ... Q32904 26076232
    4473 4y28:4 (2.8) BS01 CLA ? GO:0009416 ... Q9SQL2 26076232
    4474 4y28:4 (2.8) BS02 CLA ? GO:0009416 ... Q9SQL2 26076232
    4475 4y28:4 (2.8) BS03 CLA ? GO:0009416 ... Q9SQL2 26076232
    4476 4y28:4 (2.8) BS04 CLA ? GO:0009416 ... Q9SQL2 26076232
    4477 4y28:4 (2.8) BS05 CLA ? GO:0009416 ... Q9SQL2 26076232
    4478 4y28:4 (2.8) BS06 CLA ? GO:0009416 ... Q9SQL2 26076232
    4479 4y28:4 (2.8) BS07 CLA ? GO:0009416 ... Q9SQL2 26076232
    4480 4y28:4 (2.8) BS08 CLA ? GO:0009416 ... Q9SQL2 26076232
    4481 4y28:4 (2.8) BS09 CLA ? GO:0009416 ... Q9SQL2 26076232
    4482 4y28:4 (2.8) BS12 CLA ? GO:0009416 ... Q9SQL2 26076232
    4483 4y28:4 (2.8) BS14 CLA ? GO:0009416 ... Q9SQL2 26076232
    4484 4y28:4 (2.8) BS15 CLA ? GO:0009416 ... Q9SQL2 26076232
    4485 4y28:A (2.8) BS02 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4486 4y28:A (2.8) BS03 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4487 4y28:A (2.8) BS04 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4488 4y28:A (2.8) BS07 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4489 4y28:A (2.8) BS08 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4490 4y28:A (2.8) BS09 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4491 4y28:A (2.8) BS10 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4492 4y28:A (2.8) BS11 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4493 4y28:A (2.8) BS12 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4494 4y28:A (2.8) BS13 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4495 4y28:A (2.8) BS14 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4496 4y28:A (2.8) BS15 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4497 4y28:A (2.8) BS16 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4498 4y28:A (2.8) BS17 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4499 4y28:A (2.8) BS18 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4500 4y28:A (2.8) BS19 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4501 4y28:A (2.8) BS20 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4502 4y28:A (2.8) BS21 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4503 4y28:A (2.8) BS22 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4504 4y28:A (2.8) BS23 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4505 4y28:A (2.8) BS24 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4506 4y28:A (2.8) BS25 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4507 4y28:A (2.8) BS26 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4508 4y28:A (2.8) BS27 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4509 4y28:A (2.8) BS28 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4510 4y28:A (2.8) BS29 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4511 4y28:A (2.8) BS30 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4512 4y28:A (2.8) BS31 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4513 4y28:A (2.8) BS32 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4514 4y28:A (2.8) BS33 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4515 4y28:A (2.8) BS34 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4516 4y28:A (2.8) BS35 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4517 4y28:A (2.8) BS36 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4518 4y28:A (2.8) BS37 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4519 4y28:A (2.8) BS38 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4520 4y28:A (2.8) BS39 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4521 4y28:A (2.8) BS40 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4522 4y28:A (2.8) BS41 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4523 4y28:A (2.8) BS42 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4524 4y28:A (2.8) BS43 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4525 4y28:A (2.8) BS44 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4526 4y28:A (2.8) BS45 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4527 4y28:A (2.8) BS46 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4528 4y28:A (2.8) BS47 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4529 4y28:A (2.8) BS48 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4530 4y28:A (2.8) BS49 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4531 4y28:A (2.8) BS50 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4532 4y28:A (2.8) BS51 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4533 4y28:A (2.8) BS52 CLA 1.97.1.12 GO:0000287 ... P05310 26076232
    4534 4y28:B (2.8) BS03 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4535 4y28:B (2.8) BS04 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4536 4y28:B (2.8) BS06 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4537 4y28:B (2.8) BS07 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4538 4y28:B (2.8) BS08 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4539 4y28:B (2.8) BS09 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4540 4y28:B (2.8) BS10 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4541 4y28:B (2.8) BS11 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4542 4y28:B (2.8) BS12 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4543 4y28:B (2.8) BS13 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4544 4y28:B (2.8) BS14 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4545 4y28:B (2.8) BS15 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4546 4y28:B (2.8) BS18 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4547 4y28:B (2.8) BS19 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4548 4y28:B (2.8) BS20 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4549 4y28:B (2.8) BS21 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4550 4y28:B (2.8) BS22 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4551 4y28:B (2.8) BS23 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4552 4y28:B (2.8) BS24 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4553 4y28:B (2.8) BS25 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4554 4y28:B (2.8) BS26 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4555 4y28:B (2.8) BS27 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4556 4y28:B (2.8) BS28 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4557 4y28:B (2.8) BS29 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4558 4y28:B (2.8) BS30 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4559 4y28:B (2.8) BS31 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4560 4y28:B (2.8) BS32 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4561 4y28:B (2.8) BS33 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4562 4y28:B (2.8) BS34 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4563 4y28:B (2.8) BS35 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4564 4y28:B (2.8) BS36 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4565 4y28:B (2.8) BS37 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4566 4y28:B (2.8) BS38 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4567 4y28:B (2.8) BS39 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4568 4y28:B (2.8) BS40 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4569 4y28:B (2.8) BS41 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4570 4y28:B (2.8) BS42 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4571 4y28:B (2.8) BS43 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4572 4y28:B (2.8) BS44 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4573 4y28:B (2.8) BS45 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4574 4y28:B (2.8) BS46 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4575 4y28:B (2.8) BS47 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4576 4y28:B (2.8) BS48 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4577 4y28:B (2.8) BS49 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4578 4y28:B (2.8) BS50 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4579 4y28:B (2.8) BS51 CLA 1.97.1.12 GO:0000287 ... P05311 26076232
    4580 4y28:F (2.8) BS01 CLA ? GO:0009507 ... A0A0M3KL12 26076232
    4581 4y28:F (2.8) BS02 CLA ? GO:0009507 ... A0A0M3KL12 26076232
    4582 4y28:F (2.8) BS03 CLA ? GO:0009507 ... A0A0M3KL12 26076232
    4583 4y28:F (2.8) BS04 CLA ? GO:0009507 ... A0A0M3KL12 26076232
    4584 4y28:F (2.8) BS05 CLA ? GO:0009507 ... A0A0M3KL12 26076232
    4585 4y28:G (2.8) BS01 CLA ? GO:0009507 ... A0A0M3KL13 26076232
    4586 4y28:G (2.8) BS02 CLA ? GO:0009507 ... A0A0M3KL13 26076232
    4587 4y28:G (2.8) BS03 CLA ? GO:0009507 ... A0A0M3KL13 26076232
    4588 4y28:G (2.8) BS04 CLA ? GO:0009507 ... A0A0M3KL13 26076232
    4589 4y28:G (2.8) BS05 CLA ? GO:0009507 ... A0A0M3KL13 26076232
    4590 4y28:H (2.8) BS01 CLA ? GO:0009507 ... A0A0M3KL10 26076232
    4591 4y28:H (2.8) BS02 CLA ? GO:0009507 ... A0A0M3KL10 26076232
    4592 4y28:J (2.8) BS01 CLA ? GO:0009507 ... D5MAL3 26076232
    4593 4y28:J (2.8) BS02 CLA ? GO:0009507 ... D5MAL3 26076232
    4594 4y28:J (2.8) BS03 CLA ? GO:0009507 ... D5MAL3 26076232
    4595 4y28:J (2.8) BS04 CLA ? GO:0009507 ... D5MAL3 26076232
    4596 4y28:J (2.8) BS05 CLA ? GO:0009507 ... D5MAL3 26076232
    4597 4y28:K (2.8) BS01 CLA ? GO:0009507 ... A0A0M3KL11 26076232
    4598 4y28:K (2.8) BS02 CLA ? GO:0009507 ... A0A0M3KL11 26076232
    4599 4y28:K (2.8) BS03 CLA ? GO:0009507 ... A0A0M3KL11 26076232
    4600 4y28:L (2.8) BS02 CLA ? GO:0009522 ... E1C9L1 26076232

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218