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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    33801 7umh:a (2.6) BS31 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33802 7umh:a (2.6) BS32 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33803 7umh:a (2.6) BS33 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33804 7umh:a (2.6) BS34 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33805 7umh:a (2.6) BS35 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33806 7umh:a (2.6) BS36 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33807 7umh:a (2.6) BS37 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33808 7umh:a (2.6) BS38 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33809 7umh:a (2.6) BS39 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33810 7umh:a (2.6) BS40 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33811 7umh:a (2.6) BS41 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33812 7umh:a (2.6) BS42 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33813 7umh:a (2.6) BS43 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33814 7umh:a (2.6) BS44 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33815 7umh:a (2.6) BS45 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33816 7umh:a (2.6) BS48 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33817 7umh:a (2.6) BS49 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33818 7umh:a (2.6) BS50 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33819 7umh:a (2.6) BS51 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33820 7umh:a (2.6) BS52 CLA 1.97.1.12 GO:0000287 ... P29254 37532717
    33821 7umh:b (2.6) BS01 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33822 7umh:b (2.6) BS02 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33823 7umh:b (2.6) BS03 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33824 7umh:b (2.6) BS04 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33825 7umh:b (2.6) BS05 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33826 7umh:b (2.6) BS06 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33827 7umh:b (2.6) BS07 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33828 7umh:b (2.6) BS09 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33829 7umh:b (2.6) BS10 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33830 7umh:b (2.6) BS11 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33831 7umh:b (2.6) BS12 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33832 7umh:b (2.6) BS13 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33833 7umh:b (2.6) BS14 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33834 7umh:b (2.6) BS15 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33835 7umh:b (2.6) BS16 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33836 7umh:b (2.6) BS17 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33837 7umh:b (2.6) BS18 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33838 7umh:b (2.6) BS19 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33839 7umh:b (2.6) BS20 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33840 7umh:b (2.6) BS21 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33841 7umh:b (2.6) BS22 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33842 7umh:b (2.6) BS23 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33843 7umh:b (2.6) BS24 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33844 7umh:b (2.6) BS25 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33845 7umh:b (2.6) BS26 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33846 7umh:b (2.6) BS27 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33847 7umh:b (2.6) BS28 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33848 7umh:b (2.6) BS29 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33849 7umh:b (2.6) BS30 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33850 7umh:b (2.6) BS31 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33851 7umh:b (2.6) BS32 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33852 7umh:b (2.6) BS33 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33853 7umh:b (2.6) BS34 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33854 7umh:b (2.6) BS35 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33855 7umh:b (2.6) BS36 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33856 7umh:b (2.6) BS37 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33857 7umh:b (2.6) BS38 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33858 7umh:b (2.6) BS39 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33859 7umh:b (2.6) BS40 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33860 7umh:b (2.6) BS41 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33861 7umh:b (2.6) BS42 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33862 7umh:b (2.6) BS43 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33863 7umh:b (2.6) BS44 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33864 7umh:b (2.6) BS45 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33865 7umh:b (2.6) BS46 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33866 7umh:b (2.6) BS47 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33867 7umh:b (2.6) BS48 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33868 7umh:b (2.6) BS51 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33869 7umh:b (2.6) BS52 CLA 1.97.1.12 GO:0000287 ... P29255 37532717
    33870 7umh:f (2.6) BS01 CLA ? GO:0009522 ... P29256 37532717
    33871 7umh:f (2.6) BS02 CLA ? GO:0009522 ... P29256 37532717
    33872 7umh:f (2.6) BS03 CLA ? GO:0009522 ... P29256 37532717
    33873 7umh:f (2.6) BS04 CLA ? GO:0009522 ... P29256 37532717
    33874 7umh:f (2.6) BS05 CLA ? GO:0009522 ... P29256 37532717
    33875 7umh:f (2.6) BS06 CLA ? GO:0009522 ... P29256 37532717
    33876 7umh:f (2.6) BS07 CLA ? GO:0009522 ... P29256 37532717
    33877 7umh:g (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    33878 7umh:g (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    33879 7umh:g (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    33880 7umh:g (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    33881 7umh:g (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    33882 7umh:g (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    33883 7umh:g (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    33884 7umh:g (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    33885 7umh:g (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    33886 7umh:g (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    33887 7umh:g (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    33888 7umh:g (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    33889 7umh:g (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    33890 7umh:g (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    33891 7umh:g (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    33892 7umh:g (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    33893 7umh:g (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    33894 7umh:g (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    33895 7umh:g (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    33896 7umh:h (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    33897 7umh:h (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    33898 7umh:h (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    33899 7umh:h (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    33900 7umh:h (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    33901 7umh:h (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    33902 7umh:h (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    33903 7umh:h (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    33904 7umh:h (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    33905 7umh:h (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    33906 7umh:h (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    33907 7umh:h (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    33908 7umh:h (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    33909 7umh:h (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    33910 7umh:h (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    33911 7umh:h (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    33912 7umh:h (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    33913 7umh:h (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    33914 7umh:h (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    33915 7umh:i (2.6) BS01 CLA ? GO:0009522 ... Q55330 37532717
    33916 7umh:i (2.6) BS02 CLA ? GO:0009522 ... Q55330 37532717
    33917 7umh:i (2.6) BS03 CLA ? GO:0009522 ... Q55330 37532717
    33918 7umh:i (2.6) BS04 CLA ? GO:0009522 ... Q55330 37532717
    33919 7umh:j (2.6) BS01 CLA ? GO:0009522 ... Q55329 37532717
    33920 7umh:j (2.6) BS02 CLA ? GO:0009522 ... Q55329 37532717
    33921 7umh:j (2.6) BS03 CLA ? GO:0009522 ... Q55329 37532717
    33922 7umh:j (2.6) BS04 CLA ? GO:0009522 ... Q55329 37532717
    33923 7umh:j (2.6) BS05 CLA ? GO:0009522 ... Q55329 37532717
    33924 7umh:j (2.6) BS06 CLA ? GO:0009522 ... Q55329 37532717
    33925 7umh:j (2.6) BS07 CLA ? GO:0009522 ... Q55329 37532717
    33926 7umh:k (2.6) BS01 CLA ? GO:0009522 ... P72712 37532717
    33927 7umh:k (2.6) BS02 CLA ? GO:0009522 ... P72712 37532717
    33928 7umh:k (2.6) BS03 CLA ? GO:0009522 ... P72712 37532717
    33929 7umh:k (2.6) BS04 CLA ? GO:0009522 ... P72712 37532717
    33930 7umh:k (2.6) BS05 CLA ? GO:0009522 ... P72712 37532717
    33931 7umh:k (2.6) BS06 CLA ? GO:0009522 ... P72712 37532717
    33932 7umh:l (2.6) BS01 CLA ? GO:0005886 ... P37277 37532717
    33933 7umh:l (2.6) BS02 CLA ? GO:0005886 ... P37277 37532717
    33934 7umh:l (2.6) BS04 CLA ? GO:0005886 ... P37277 37532717
    33935 7umh:l (2.6) BS05 CLA ? GO:0005886 ... P37277 37532717
    33936 7umh:l (2.6) BS06 CLA ? GO:0005886 ... P37277 37532717
    33937 7umh:l (2.6) BS08 CLA ? GO:0005886 ... P37277 37532717
    33938 7umh:l (2.6) BS09 CLA ? GO:0005886 ... P37277 37532717
    33939 7umh:l (2.6) BS10 CLA ? GO:0005886 ... P37277 37532717
    33940 7umh:m (2.6) BS01 CLA ? GO:0009522 ... P72986 37532717
    33941 7umh:n (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    33942 7umh:n (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    33943 7umh:n (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    33944 7umh:n (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    33945 7umh:n (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    33946 7umh:n (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    33947 7umh:n (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    33948 7umh:n (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    33949 7umh:n (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    33950 7umh:n (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    33951 7umh:n (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    33952 7umh:n (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    33953 7umh:n (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    33954 7umh:n (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    33955 7umh:n (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    33956 7umh:n (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    33957 7umh:n (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    33958 7umh:n (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    33959 7umh:n (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    33960 7umh:o (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    33961 7umh:o (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    33962 7umh:o (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    33963 7umh:o (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    33964 7umh:o (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    33965 7umh:o (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    33966 7umh:o (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    33967 7umh:o (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    33968 7umh:o (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    33969 7umh:o (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    33970 7umh:o (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    33971 7umh:o (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    33972 7umh:o (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    33973 7umh:o (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    33974 7umh:o (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    33975 7umh:o (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    33976 7umh:o (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    33977 7umh:o (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    33978 7umh:o (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    33979 7umh:o (2.6) BS20 CLA ? GO:0005886 ... Q55274 37532717
    33980 7umh:p (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    33981 7umh:p (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    33982 7umh:p (2.6) BS03 CLA ? GO:0005886 ... Q55274 37532717
    33983 7umh:p (2.6) BS04 CLA ? GO:0005886 ... Q55274 37532717
    33984 7umh:p (2.6) BS05 CLA ? GO:0005886 ... Q55274 37532717
    33985 7umh:p (2.6) BS06 CLA ? GO:0005886 ... Q55274 37532717
    33986 7umh:p (2.6) BS07 CLA ? GO:0005886 ... Q55274 37532717
    33987 7umh:p (2.6) BS08 CLA ? GO:0005886 ... Q55274 37532717
    33988 7umh:p (2.6) BS09 CLA ? GO:0005886 ... Q55274 37532717
    33989 7umh:p (2.6) BS10 CLA ? GO:0005886 ... Q55274 37532717
    33990 7umh:p (2.6) BS11 CLA ? GO:0005886 ... Q55274 37532717
    33991 7umh:p (2.6) BS12 CLA ? GO:0005886 ... Q55274 37532717
    33992 7umh:p (2.6) BS13 CLA ? GO:0005886 ... Q55274 37532717
    33993 7umh:p (2.6) BS14 CLA ? GO:0005886 ... Q55274 37532717
    33994 7umh:p (2.6) BS15 CLA ? GO:0005886 ... Q55274 37532717
    33995 7umh:p (2.6) BS16 CLA ? GO:0005886 ... Q55274 37532717
    33996 7umh:p (2.6) BS17 CLA ? GO:0005886 ... Q55274 37532717
    33997 7umh:p (2.6) BS18 CLA ? GO:0005886 ... Q55274 37532717
    33998 7umh:p (2.6) BS19 CLA ? GO:0005886 ... Q55274 37532717
    33999 7umh:q (2.6) BS01 CLA ? GO:0005886 ... Q55274 37532717
    34000 7umh:q (2.6) BS02 CLA ? GO:0005886 ... Q55274 37532717
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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