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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    32001 7qco:g (3.7) BS35 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32002 7qco:g (3.7) BS36 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32003 7qco:g (3.7) BS37 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32004 7qco:g (3.7) BS38 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32005 7qco:g (3.7) BS39 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32006 7qco:g (3.7) BS40 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32007 7qco:g (3.7) BS41 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32008 7qco:g (3.7) BS42 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32009 7qco:g (3.7) BS43 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32010 7qco:g (3.7) BS44 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32011 7qco:g (3.7) BS45 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    32012 7qco:i (3.7) BS01 CLA ? GO:0009522 ... A0A2S6VDT4 35059628
    32013 7qco:j (3.7) BS01 CLA ? GO:0009522 ... V5JYA2 35059628
    32014 7qco:k (3.7) BS01 CLA ? GO:0009522 ... A0A2S6V467 35059628
    32015 7qco:l (3.7) BS01 CLA ? GO:0009522 ... V5JYE0 35059628
    32016 7qco:l (3.7) BS02 CLA ? GO:0009522 ... V5JYE0 35059628
    32017 7qco:l (3.7) BS03 CLA ? GO:0009522 ... V5JYE0 35059628
    32018 7qco:l (3.7) BS04 CLA ? GO:0009522 ... V5JYE0 35059628
    32019 7qco:l (3.7) BS05 CLA ? GO:0009522 ... V5JYE0 35059628
    32020 7qco:o (3.7) BS01 CLA ? GO:0009522 ... A0A2S6VDZ1 35059628
    32021 7qco:p (3.7) BS01 CLA ? GO:0009522 ... A0A2S6VDT4 35059628
    32022 7qco:q (3.7) BS01 CLA ? GO:0009522 ... V5JYA2 35059628
    32023 7qco:r (3.7) BS01 CLA ? GO:0009522 ... A0A2S6V467 35059628
    32024 7qco:r (3.7) BS02 CLA ? GO:0009522 ... A0A2S6V467 35059628
    32025 7qco:s (3.7) BS01 CLA ? GO:0009522 ... V5JYE0 35059628
    32026 7qco:s (3.7) BS02 CLA ? GO:0009522 ... V5JYE0 35059628
    32027 7qco:s (3.7) BS03 CLA ? GO:0009522 ... V5JYE0 35059628
    32028 7qrm:B (2.7) BS01 CLA ? GO:0005739 ... P00166 36638176
    32029 7qrm:J (2.7) BS01 CLA ? GO:0005739 ... P00166 36638176
    32030 7r0w:A (2.8) BS06 CLA ? GO:0009055 ... Q57038 35726684
    32031 7r0w:B (2.8) BS03 CLA ? GO:0008121 ... P27589 35726684
    32032 7r0w:I (2.8) BS06 CLA ? GO:0009055 ... Q57038 35726684
    32033 7r0w:J (2.8) BS03 CLA ? GO:0008121 ... P27589 35726684
    32034 7r3k:1 (2.52) BS02 CLA ? GO:0009416 ... Q05093 36979472
    32035 7r3k:1 (2.52) BS03 CLA ? GO:0009416 ... Q05093 36979472
    32036 7r3k:1 (2.52) BS04 CLA ? GO:0009416 ... Q05093 36979472
    32037 7r3k:1 (2.52) BS06 CLA ? GO:0009416 ... Q05093 36979472
    32038 7r3k:1 (2.52) BS07 CLA ? GO:0009416 ... Q05093 36979472
    32039 7r3k:1 (2.52) BS08 CLA ? GO:0009416 ... Q05093 36979472
    32040 7r3k:1 (2.52) BS09 CLA ? GO:0009416 ... Q05093 36979472
    32041 7r3k:1 (2.52) BS11 CLA ? GO:0009416 ... Q05093 36979472
    32042 7r3k:1 (2.52) BS12 CLA ? GO:0009416 ... Q05093 36979472
    32043 7r3k:1 (2.52) BS14 CLA ? GO:0009416 ... Q05093 36979472
    32044 7r3k:3 (2.52) BS01 CLA ? GO:0009416 ... Q75VY9 36979472
    32045 7r3k:3 (2.52) BS02 CLA ? GO:0009416 ... Q75VY9 36979472
    32046 7r3k:3 (2.52) BS03 CLA ? GO:0009416 ... Q75VY9 36979472
    32047 7r3k:3 (2.52) BS04 CLA ? GO:0009416 ... Q75VY9 36979472
    32048 7r3k:3 (2.52) BS05 CLA ? GO:0009416 ... Q75VY9 36979472
    32049 7r3k:3 (2.52) BS06 CLA ? GO:0009416 ... Q75VY9 36979472
    32050 7r3k:3 (2.52) BS07 CLA ? GO:0009416 ... Q75VY9 36979472
    32051 7r3k:3 (2.52) BS08 CLA ? GO:0009416 ... Q75VY9 36979472
    32052 7r3k:3 (2.52) BS09 CLA ? GO:0009416 ... Q75VY9 36979472
    32053 7r3k:3 (2.52) BS10 CLA ? GO:0009416 ... Q75VY9 36979472
    32054 7r3k:3 (2.52) BS11 CLA ? GO:0009416 ... Q75VY9 36979472
    32055 7r3k:3 (2.52) BS13 CLA ? GO:0009416 ... Q75VY9 36979472
    32056 7r3k:3 (2.52) BS14 CLA ? GO:0009416 ... Q75VY9 36979472
    32057 7r3k:3 (2.52) BS15 CLA ? GO:0009416 ... Q75VY9 36979472
    32058 7r3k:3 (2.52) BS17 CLA ? GO:0009416 ... Q75VY9 36979472
    32059 7r3k:4 (2.52) BS03 CLA ? GO:0009416 ... Q75VZ0 36979472
    32060 7r3k:4 (2.52) BS04 CLA ? GO:0009416 ... Q75VZ0 36979472
    32061 7r3k:4 (2.52) BS05 CLA ? GO:0009416 ... Q75VZ0 36979472
    32062 7r3k:4 (2.52) BS06 CLA ? GO:0009416 ... Q75VZ0 36979472
    32063 7r3k:4 (2.52) BS07 CLA ? GO:0009416 ... Q75VZ0 36979472
    32064 7r3k:4 (2.52) BS08 CLA ? GO:0009416 ... Q75VZ0 36979472
    32065 7r3k:4 (2.52) BS09 CLA ? GO:0009416 ... Q75VZ0 36979472
    32066 7r3k:4 (2.52) BS10 CLA ? GO:0009416 ... Q75VZ0 36979472
    32067 7r3k:4 (2.52) BS13 CLA ? GO:0009416 ... Q75VZ0 36979472
    32068 7r3k:4 (2.52) BS15 CLA ? GO:0009416 ... Q75VZ0 36979472
    32069 7r3k:4 (2.52) BS17 CLA ? GO:0009416 ... Q75VZ0 36979472
    32070 7r3k:5 (2.52) BS01 CLA ? GO:0009416 ... Q75VY8 36979472
    32071 7r3k:5 (2.52) BS03 CLA ? GO:0009416 ... Q75VY8 36979472
    32072 7r3k:5 (2.52) BS04 CLA ? GO:0009416 ... Q75VY8 36979472
    32073 7r3k:5 (2.52) BS05 CLA ? GO:0009416 ... Q75VY8 36979472
    32074 7r3k:5 (2.52) BS06 CLA ? GO:0009416 ... Q75VY8 36979472
    32075 7r3k:5 (2.52) BS07 CLA ? GO:0009416 ... Q75VY8 36979472
    32076 7r3k:5 (2.52) BS08 CLA ? GO:0009416 ... Q75VY8 36979472
    32077 7r3k:5 (2.52) BS09 CLA ? GO:0009416 ... Q75VY8 36979472
    32078 7r3k:5 (2.52) BS10 CLA ? GO:0009416 ... Q75VY8 36979472
    32079 7r3k:5 (2.52) BS11 CLA ? GO:0009416 ... Q75VY8 36979472
    32080 7r3k:5 (2.52) BS14 CLA ? GO:0009416 ... Q75VY8 36979472
    32081 7r3k:5 (2.52) BS16 CLA ? GO:0009416 ... Q75VY8 36979472
    32082 7r3k:5 (2.52) BS18 CLA ? GO:0009416 ... Q75VY8 36979472
    32083 7r3k:5 (2.52) BS19 CLA ? GO:0009416 ... Q75VY8 36979472
    32084 7r3k:5 (2.52) BS20 CLA ? GO:0009416 ... Q75VY8 36979472
    32085 7r3k:6 (2.52) BS01 CLA ? GO:0009416 ... Q75VY6 36979472
    32086 7r3k:6 (2.52) BS02 CLA ? GO:0009416 ... Q75VY6 36979472
    32087 7r3k:6 (2.52) BS03 CLA ? GO:0009416 ... Q75VY6 36979472
    32088 7r3k:6 (2.52) BS04 CLA ? GO:0009416 ... Q75VY6 36979472
    32089 7r3k:6 (2.52) BS05 CLA ? GO:0009416 ... Q75VY6 36979472
    32090 7r3k:6 (2.52) BS06 CLA ? GO:0009416 ... Q75VY6 36979472
    32091 7r3k:6 (2.52) BS07 CLA ? GO:0009416 ... Q75VY6 36979472
    32092 7r3k:6 (2.52) BS08 CLA ? GO:0009416 ... Q75VY6 36979472
    32093 7r3k:6 (2.52) BS09 CLA ? GO:0009416 ... Q75VY6 36979472
    32094 7r3k:6 (2.52) BS10 CLA ? GO:0009416 ... Q75VY6 36979472
    32095 7r3k:6 (2.52) BS14 CLA ? GO:0009416 ... Q75VY6 36979472
    32096 7r3k:6 (2.52) BS16 CLA ? GO:0009416 ... Q75VY6 36979472
    32097 7r3k:6 (2.52) BS18 CLA ? GO:0009416 ... Q75VY6 36979472
    32098 7r3k:6 (2.52) BS19 CLA ? GO:0009416 ... Q75VY6 36979472
    32099 7r3k:7 (2.52) BS01 CLA ? GO:0009416 ... Q84Y02 36979472
    32100 7r3k:7 (2.52) BS02 CLA ? GO:0009416 ... Q84Y02 36979472
    32101 7r3k:7 (2.52) BS03 CLA ? GO:0009416 ... Q84Y02 36979472
    32102 7r3k:7 (2.52) BS04 CLA ? GO:0009416 ... Q84Y02 36979472
    32103 7r3k:7 (2.52) BS05 CLA ? GO:0009416 ... Q84Y02 36979472
    32104 7r3k:7 (2.52) BS06 CLA ? GO:0009416 ... Q84Y02 36979472
    32105 7r3k:7 (2.52) BS07 CLA ? GO:0009416 ... Q84Y02 36979472
    32106 7r3k:7 (2.52) BS08 CLA ? GO:0009416 ... Q84Y02 36979472
    32107 7r3k:7 (2.52) BS11 CLA ? GO:0009416 ... Q84Y02 36979472
    32108 7r3k:7 (2.52) BS12 CLA ? GO:0009416 ... Q84Y02 36979472
    32109 7r3k:7 (2.52) BS13 CLA ? GO:0009416 ... Q84Y02 36979472
    32110 7r3k:7 (2.52) BS14 CLA ? GO:0009416 ... Q84Y02 36979472
    32111 7r3k:7 (2.52) BS15 CLA ? GO:0009416 ... Q84Y02 36979472
    32112 7r3k:7 (2.52) BS17 CLA ? GO:0009416 ... Q84Y02 36979472
    32113 7r3k:8 (2.52) BS01 CLA ? GO:0009416 ... Q75VY7 36979472
    32114 7r3k:8 (2.52) BS03 CLA ? GO:0009416 ... Q75VY7 36979472
    32115 7r3k:8 (2.52) BS04 CLA ? GO:0009416 ... Q75VY7 36979472
    32116 7r3k:8 (2.52) BS05 CLA ? GO:0009416 ... Q75VY7 36979472
    32117 7r3k:8 (2.52) BS06 CLA ? GO:0009416 ... Q75VY7 36979472
    32118 7r3k:8 (2.52) BS07 CLA ? GO:0009416 ... Q75VY7 36979472
    32119 7r3k:8 (2.52) BS08 CLA ? GO:0009416 ... Q75VY7 36979472
    32120 7r3k:8 (2.52) BS09 CLA ? GO:0009416 ... Q75VY7 36979472
    32121 7r3k:8 (2.52) BS10 CLA ? GO:0009416 ... Q75VY7 36979472
    32122 7r3k:8 (2.52) BS14 CLA ? GO:0009416 ... Q75VY7 36979472
    32123 7r3k:8 (2.52) BS16 CLA ? GO:0009416 ... Q75VY7 36979472
    32124 7r3k:A (2.52) BS02 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32125 7r3k:A (2.52) BS03 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32126 7r3k:A (2.52) BS04 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32127 7r3k:A (2.52) BS05 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32128 7r3k:A (2.52) BS06 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32129 7r3k:A (2.52) BS07 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32130 7r3k:A (2.52) BS08 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32131 7r3k:A (2.52) BS09 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32132 7r3k:A (2.52) BS10 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32133 7r3k:A (2.52) BS11 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32134 7r3k:A (2.52) BS12 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32135 7r3k:A (2.52) BS13 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32136 7r3k:A (2.52) BS14 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32137 7r3k:A (2.52) BS15 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32138 7r3k:A (2.52) BS16 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32139 7r3k:A (2.52) BS17 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32140 7r3k:A (2.52) BS18 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32141 7r3k:A (2.52) BS19 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32142 7r3k:A (2.52) BS20 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32143 7r3k:A (2.52) BS21 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32144 7r3k:A (2.52) BS22 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32145 7r3k:A (2.52) BS23 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32146 7r3k:A (2.52) BS24 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32147 7r3k:A (2.52) BS25 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32148 7r3k:A (2.52) BS26 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32149 7r3k:A (2.52) BS27 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32150 7r3k:A (2.52) BS28 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32151 7r3k:A (2.52) BS29 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32152 7r3k:A (2.52) BS30 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32153 7r3k:A (2.52) BS31 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32154 7r3k:A (2.52) BS32 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32155 7r3k:A (2.52) BS33 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32156 7r3k:A (2.52) BS34 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32157 7r3k:A (2.52) BS35 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32158 7r3k:A (2.52) BS36 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32159 7r3k:A (2.52) BS37 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32160 7r3k:A (2.52) BS38 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32161 7r3k:A (2.52) BS39 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32162 7r3k:A (2.52) BS40 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32163 7r3k:A (2.52) BS41 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32164 7r3k:A (2.52) BS42 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32165 7r3k:A (2.52) BS43 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32166 7r3k:A (2.52) BS46 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32167 7r3k:A (2.52) BS47 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32168 7r3k:A (2.52) BS48 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32169 7r3k:A (2.52) BS49 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32170 7r3k:A (2.52) BS50 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32171 7r3k:A (2.52) BS51 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32172 7r3k:A (2.52) BS53 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32173 7r3k:A (2.52) BS54 CLA 1.97.1.12 GO:0000287 ... P12154 36979472
    32174 7r3k:B (2.52) BS02 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32175 7r3k:B (2.52) BS03 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32176 7r3k:B (2.52) BS04 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32177 7r3k:B (2.52) BS06 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32178 7r3k:B (2.52) BS07 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32179 7r3k:B (2.52) BS08 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32180 7r3k:B (2.52) BS09 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32181 7r3k:B (2.52) BS10 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32182 7r3k:B (2.52) BS11 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32183 7r3k:B (2.52) BS12 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32184 7r3k:B (2.52) BS13 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32185 7r3k:B (2.52) BS14 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32186 7r3k:B (2.52) BS15 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32187 7r3k:B (2.52) BS16 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32188 7r3k:B (2.52) BS17 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32189 7r3k:B (2.52) BS18 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32190 7r3k:B (2.52) BS19 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32191 7r3k:B (2.52) BS20 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32192 7r3k:B (2.52) BS21 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32193 7r3k:B (2.52) BS22 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32194 7r3k:B (2.52) BS23 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32195 7r3k:B (2.52) BS24 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32196 7r3k:B (2.52) BS25 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32197 7r3k:B (2.52) BS26 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32198 7r3k:B (2.52) BS27 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32199 7r3k:B (2.52) BS28 CLA 1.97.1.12 GO:0000287 ... P09144 36979472
    32200 7r3k:B (2.52) BS29 CLA 1.97.1.12 GO:0000287 ... P09144 36979472

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218