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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 49284 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    30001 7nho:K (2.66) BS01 CLA ? GO:0005737 ... Q9F1K9 33846594
    30002 7nhp:A (2.72) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 33846594
    30003 7nhp:A (2.72) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 33846594
    30004 7nhp:A (2.72) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 33846594
    30005 7nhp:A (2.72) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 33846594
    30006 7nhp:B (2.72) BS01 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30007 7nhp:B (2.72) BS02 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30008 7nhp:B (2.72) BS03 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30009 7nhp:B (2.72) BS04 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30010 7nhp:B (2.72) BS05 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30011 7nhp:B (2.72) BS06 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30012 7nhp:B (2.72) BS07 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30013 7nhp:B (2.72) BS08 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30014 7nhp:B (2.72) BS09 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30015 7nhp:B (2.72) BS10 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30016 7nhp:B (2.72) BS11 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30017 7nhp:B (2.72) BS12 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30018 7nhp:B (2.72) BS13 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30019 7nhp:B (2.72) BS14 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30020 7nhp:B (2.72) BS15 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30021 7nhp:B (2.72) BS16 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30022 7nhp:C (2.72) BS01 CLA ? GO:0005737 ... Q8DIF8 33846594
    30023 7nhp:C (2.72) BS02 CLA ? GO:0005737 ... Q8DIF8 33846594
    30024 7nhp:C (2.72) BS03 CLA ? GO:0005737 ... Q8DIF8 33846594
    30025 7nhp:C (2.72) BS04 CLA ? GO:0005737 ... Q8DIF8 33846594
    30026 7nhp:C (2.72) BS05 CLA ? GO:0005737 ... Q8DIF8 33846594
    30027 7nhp:C (2.72) BS06 CLA ? GO:0005737 ... Q8DIF8 33846594
    30028 7nhp:C (2.72) BS07 CLA ? GO:0005737 ... Q8DIF8 33846594
    30029 7nhp:C (2.72) BS08 CLA ? GO:0005737 ... Q8DIF8 33846594
    30030 7nhp:C (2.72) BS09 CLA ? GO:0005737 ... Q8DIF8 33846594
    30031 7nhp:C (2.72) BS10 CLA ? GO:0005737 ... Q8DIF8 33846594
    30032 7nhp:C (2.72) BS11 CLA ? GO:0005737 ... Q8DIF8 33846594
    30033 7nhp:C (2.72) BS12 CLA ? GO:0005737 ... Q8DIF8 33846594
    30034 7nhp:C (2.72) BS13 CLA ? GO:0005737 ... Q8DIF8 33846594
    30035 7nhp:D (2.72) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 33846594
    30036 7nhp:D (2.72) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 33846594
    30037 7nhp:D (2.72) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 33846594
    30038 7nhp:D (2.72) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 33846594
    30039 7nhp:D (2.72) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 33846594
    30040 7nhp:H (2.72) BS01 CLA ? GO:0009523 ... Q8DJ43 33846594
    30041 7nhp:H (2.72) BS02 CLA ? GO:0009523 ... Q8DJ43 33846594
    30042 7nhp:K (2.72) BS02 CLA ? GO:0005737 ... Q9F1K9 33846594
    30043 7nhp:K (2.72) BS03 CLA ? GO:0005737 ... Q9F1K9 33846594
    30044 7nhq:A (2.68) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 33846594
    30045 7nhq:A (2.68) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 33846594
    30046 7nhq:A (2.68) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 33846594
    30047 7nhq:A (2.68) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 33846594
    30048 7nhq:B (2.68) BS01 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30049 7nhq:B (2.68) BS02 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30050 7nhq:B (2.68) BS03 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30051 7nhq:B (2.68) BS04 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30052 7nhq:B (2.68) BS05 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30053 7nhq:B (2.68) BS06 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30054 7nhq:B (2.68) BS07 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30055 7nhq:B (2.68) BS08 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30056 7nhq:B (2.68) BS09 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30057 7nhq:B (2.68) BS10 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30058 7nhq:B (2.68) BS11 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30059 7nhq:B (2.68) BS12 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30060 7nhq:B (2.68) BS13 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30061 7nhq:B (2.68) BS14 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30062 7nhq:B (2.68) BS15 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30063 7nhq:B (2.68) BS16 CLA ? GO:0009521 ... Q8DIQ1 33846594
    30064 7nhq:C (2.68) BS01 CLA ? GO:0005737 ... Q8DIF8 33846594
    30065 7nhq:C (2.68) BS02 CLA ? GO:0005737 ... Q8DIF8 33846594
    30066 7nhq:C (2.68) BS03 CLA ? GO:0005737 ... Q8DIF8 33846594
    30067 7nhq:C (2.68) BS04 CLA ? GO:0005737 ... Q8DIF8 33846594
    30068 7nhq:C (2.68) BS05 CLA ? GO:0005737 ... Q8DIF8 33846594
    30069 7nhq:C (2.68) BS06 CLA ? GO:0005737 ... Q8DIF8 33846594
    30070 7nhq:C (2.68) BS07 CLA ? GO:0005737 ... Q8DIF8 33846594
    30071 7nhq:C (2.68) BS08 CLA ? GO:0005737 ... Q8DIF8 33846594
    30072 7nhq:C (2.68) BS09 CLA ? GO:0005737 ... Q8DIF8 33846594
    30073 7nhq:C (2.68) BS10 CLA ? GO:0005737 ... Q8DIF8 33846594
    30074 7nhq:C (2.68) BS11 CLA ? GO:0005737 ... Q8DIF8 33846594
    30075 7nhq:C (2.68) BS12 CLA ? GO:0005737 ... Q8DIF8 33846594
    30076 7nhq:C (2.68) BS13 CLA ? GO:0005737 ... Q8DIF8 33846594
    30077 7nhq:D (2.68) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 33846594
    30078 7nhq:D (2.68) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 33846594
    30079 7nhq:D (2.68) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 33846594
    30080 7nhq:D (2.68) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 33846594
    30081 7nhq:D (2.68) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 33846594
    30082 7nhq:H (2.68) BS01 CLA ? GO:0009523 ... Q8DJ43 33846594
    30083 7nhq:H (2.68) BS02 CLA ? GO:0009523 ... Q8DJ43 33846594
    30084 7nhq:K (2.68) BS02 CLA ? GO:0005737 ... Q9F1K9 33846594
    30085 7nhq:K (2.68) BS03 CLA ? GO:0005737 ... Q9F1K9 33846594
    30086 7o1v:A (4.31) BS01 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30087 7o1v:A (4.31) BS02 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30088 7o1v:A (4.31) BS03 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30089 7o1v:A (4.31) BS04 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30090 7o1v:A (4.31) BS05 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30091 7o1v:A (4.31) BS06 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30092 7o1v:A (4.31) BS07 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30093 7o1v:A (4.31) BS08 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30094 7o1v:A (4.31) BS09 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30095 7o1v:A (4.31) BS10 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30096 7o1v:A (4.31) BS11 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30097 7o1v:A (4.31) BS12 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30098 7o1v:A (4.31) BS13 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30099 7o1v:A (4.31) BS14 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30100 7o1v:A (4.31) BS15 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30101 7o1v:A (4.31) BS16 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30102 7o1v:A (4.31) BS17 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30103 7o1v:A (4.31) BS18 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30104 7o1v:A (4.31) BS19 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30105 7o1v:A (4.31) BS20 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30106 7o1v:A (4.31) BS21 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30107 7o1v:A (4.31) BS22 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30108 7o1v:A (4.31) BS23 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30109 7o1v:A (4.31) BS24 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30110 7o1v:A (4.31) BS25 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30111 7o1v:A (4.31) BS26 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30112 7o1v:A (4.31) BS27 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30113 7o1v:A (4.31) BS28 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30114 7o1v:A (4.31) BS29 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30115 7o1v:A (4.31) BS30 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30116 7o1v:A (4.31) BS31 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30117 7o1v:A (4.31) BS32 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30118 7o1v:A (4.31) BS33 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30119 7o1v:A (4.31) BS34 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30120 7o1v:A (4.31) BS35 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30121 7o1v:A (4.31) BS36 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30122 7o1v:A (4.31) BS37 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30123 7o1v:A (4.31) BS38 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30124 7o1v:A (4.31) BS39 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30125 7o1v:A (4.31) BS40 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30126 7o1v:A (4.31) BS42 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30127 7o1v:A (4.31) BS44 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30128 7o1v:A (4.31) BS45 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30129 7o1v:A (4.31) BS46 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30130 7o1v:A (4.31) BS47 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30131 7o1v:A (4.31) BS48 CLA 1.97.1.12 GO:0000287 ... P29254 34472838
    30132 7o1v:B (4.31) BS01 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30133 7o1v:B (4.31) BS02 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30134 7o1v:B (4.31) BS03 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30135 7o1v:B (4.31) BS04 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30136 7o1v:B (4.31) BS06 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30137 7o1v:B (4.31) BS07 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30138 7o1v:B (4.31) BS08 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30139 7o1v:B (4.31) BS09 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30140 7o1v:B (4.31) BS10 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30141 7o1v:B (4.31) BS11 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30142 7o1v:B (4.31) BS12 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30143 7o1v:B (4.31) BS13 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30144 7o1v:B (4.31) BS14 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30145 7o1v:B (4.31) BS15 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30146 7o1v:B (4.31) BS16 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30147 7o1v:B (4.31) BS17 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30148 7o1v:B (4.31) BS18 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30149 7o1v:B (4.31) BS19 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30150 7o1v:B (4.31) BS20 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30151 7o1v:B (4.31) BS21 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30152 7o1v:B (4.31) BS22 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30153 7o1v:B (4.31) BS23 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30154 7o1v:B (4.31) BS24 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30155 7o1v:B (4.31) BS25 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30156 7o1v:B (4.31) BS26 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30157 7o1v:B (4.31) BS27 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30158 7o1v:B (4.31) BS28 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30159 7o1v:B (4.31) BS29 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30160 7o1v:B (4.31) BS30 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30161 7o1v:B (4.31) BS31 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30162 7o1v:B (4.31) BS32 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30163 7o1v:B (4.31) BS33 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30164 7o1v:B (4.31) BS34 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30165 7o1v:B (4.31) BS35 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30166 7o1v:B (4.31) BS36 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30167 7o1v:B (4.31) BS37 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30168 7o1v:B (4.31) BS38 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30169 7o1v:B (4.31) BS39 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30170 7o1v:B (4.31) BS40 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30171 7o1v:B (4.31) BS41 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30172 7o1v:B (4.31) BS42 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30173 7o1v:B (4.31) BS43 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30174 7o1v:B (4.31) BS44 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30175 7o1v:B (4.31) BS45 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30176 7o1v:B (4.31) BS46 CLA 1.97.1.12 GO:0000287 ... P29255 34472838
    30177 7o1v:K (4.31) BS01 CLA ? GO:0009522 ... P74564 34472838
    30178 7o1v:K (4.31) BS02 CLA ? GO:0009522 ... P74564 34472838
    30179 7o1v:K (4.31) BS03 CLA ? GO:0009522 ... P74564 34472838
    30180 7o1v:K (4.31) BS04 CLA ? GO:0009522 ... P74564 34472838
    30181 7o1v:M (4.31) BS01 CLA ? GO:0009522 ... P72986 34472838
    30182 7oui:2 (2.79) BS02 CLA ? GO:0005515 ... Q9S7M0 34330992
    30183 7oui:2 (2.79) BS04 CLA ? GO:0005515 ... Q9S7M0 34330992
    30184 7oui:4 (2.79) BS01 CLA ? GO:0009765 ... Q9LMQ2 34330992
    30185 7oui:6 (2.79) BS02 CLA ? GO:0005515 ... Q9S7M0 34330992
    30186 7oui:6 (2.79) BS04 CLA ? GO:0005515 ... Q9S7M0 34330992
    30187 7oui:8 (2.79) BS01 CLA ? GO:0009765 ... Q9LMQ2 34330992
    30188 7oui:A (2.79) BS02 CLA 1.10.3.9 GO:0003729 ... P83755 34330992
    30189 7oui:A (2.79) BS03 CLA 1.10.3.9 GO:0003729 ... P83755 34330992
    30190 7oui:A (2.79) BS06 CLA 1.10.3.9 GO:0003729 ... P83755 34330992
    30191 7oui:A (2.79) BS11 CLA 1.10.3.9 GO:0003729 ... P83755 34330992
    30192 7oui:A (2.79) BS12 CLA 1.10.3.9 GO:0003729 ... P83755 34330992
    30193 7oui:B (2.79) BS02 CLA ? GO:0003729 ... P56777 34330992
    30194 7oui:B (2.79) BS03 CLA ? GO:0003729 ... P56777 34330992
    30195 7oui:B (2.79) BS04 CLA ? GO:0003729 ... P56777 34330992
    30196 7oui:B (2.79) BS05 CLA ? GO:0003729 ... P56777 34330992
    30197 7oui:B (2.79) BS06 CLA ? GO:0003729 ... P56777 34330992
    30198 7oui:B (2.79) BS07 CLA ? GO:0003729 ... P56777 34330992
    30199 7oui:B (2.79) BS08 CLA ? GO:0003729 ... P56777 34330992
    30200 7oui:B (2.79) BS09 CLA ? GO:0003729 ... P56777 34330992

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218