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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    44401 9etn:A (1.584) BS01 CA N/A GO:0005515 ... Q8R555 39029889
    44402 9etn:A (1.584) BS02 CA N/A GO:0005515 ... Q8R555 39029889
    44403 9etn:A (1.584) BS03 CA N/A GO:0005515 ... Q8R555 39029889
    44404 9etn:A (1.584) BS04 CA N/A GO:0005515 ... Q8R555 39029889
    44405 9etn:A (1.584) BS05 CA N/A GO:0005515 ... Q8R555 39029889
    44406 9etn:A (1.584) BS06 CA N/A GO:0005515 ... Q8R555 39029889
    44407 9eu5:A (3.0) BS05 CA N/A N/A Q64610 39008358
    44408 9ezl:A (2.97) BS01 CA N/A N/A I3NX86 39109746
    44409 9ezl:B (2.97) BS01 CA N/A N/A I3NX86 39109746
    44410 9ezl:C (2.97) BS01 CA N/A N/A I3NX86 39109746
    44411 9ezl:D (2.97) BS01 CA N/A N/A I3NX86 39109746
    44412 9ezl:E (2.97) BS01 CA N/A N/A I3NX86 39109746
    44413 9ezl:F (2.97) BS01 CA N/A N/A I3NX86 39109746
    44414 9ezl:G (2.97) BS01 CA N/A N/A I3NX86 39109746
    44415 9ezl:H (2.97) BS01 CA N/A N/A I3NX86 39109746
    44416 9f17:A (1.7) BS01 CA N/A N/A P56137 39062851
    44417 9f17:B (1.7) BS01 CA N/A N/A P56137 39062851
    44418 9f6i:A (3.3) BS05 CA N/A N/A Q07864 39112807
    44419 9f6l:A (3.9) BS04 CA N/A N/A Q07864 39112807
    44420 9f6l:A (3.9) BS05 CA N/A N/A Q07864 39112807
    44421 9f8g:A (2.2) BS02 CA N/A N/A P81947 39118608
    44422 9f8x:A (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    44423 9f8x:A (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    44424 9f8x:B (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    44425 9f8x:B (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    44426 9f8x:C (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    44427 9f8x:C (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    44428 9f8x:D (1.498) BS03 CA N/A GO:0005507 ... A0A368XMX8 38720157
    44429 9f8x:D (1.498) BS04 CA N/A GO:0005507 ... A0A368XMX8 38720157
    44430 9fcd:A (1.5) BS02 CA N/A N/A A0A1W6R556 39121999
    44431 9fce:A (1.95) BS02 CA N/A N/A A0A1W6R583 39121999
    44432 9fce:B (1.95) BS02 CA N/A N/A A0A1W6R583 39121999
    44433 9fcl:A (1.75) BS02 CA N/A N/A A0A1W6R556 39121999
    44434 9fcq:A (1.4) BS02 CA N/A N/A A0A1W6R556 39121999
    44435 9fcy:A (1.85) BS02 CA N/A N/A A0A1W6R556 39121999
    44436 9fcy:B (1.85) BS02 CA N/A N/A A0A1W6R556 39121999
    44437 9fcy:C (1.85) BS02 CA N/A N/A A0A1W6R556 39121999
    44438 9fcy:D (1.85) BS02 CA N/A N/A A0A1W6R556 39121999
    44439 9fd3:A (1.4) BS02 CA N/A N/A A0A1W6R556 39121999
    44440 9ftg:A (3.1) BS01 CA N/A N/A V4JF97 N/A
    44441 9ftg:B (3.1) BS01 CA N/A N/A V4JF97 N/A
    44442 9ftg:C (3.1) BS01 CA N/A N/A V4JF97 N/A
    44443 9ftg:D (3.1) BS01 CA N/A N/A V4JF97 N/A
    44444 9ftg:E (3.1) BS01 CA N/A N/A V4JF97 N/A
    44445 9ftw:A (1.65) BS01 CA N/A N/A P21128 39070628
    44446 9ftw:A (1.65) BS02 CA N/A N/A P21128 39070628
    44447 9ftw:A (1.65) BS03 CA N/A N/A P21128 39070628
    44448 9ftw:A (1.65) BS04 CA N/A N/A P21128 39070628
    44449 9ftw:A (1.65) BS05 CA N/A N/A P21128 39070628
    44450 9ftw:B (1.65) BS01 CA N/A N/A P21128 39070628
    44451 9ftw:B (1.65) BS02 CA N/A N/A P21128 39070628
    44452 9ftw:B (1.65) BS03 CA N/A N/A P21128 39070628
    44453 9ftw:B (1.65) BS04 CA N/A N/A P21128 39070628
    44454 9ftw:B (1.65) BS05 CA N/A N/A P21128 39070628
    44455 9fzc:A (2.27) BS01 CA N/A N/A P0A910 N/A
    44456 9fzc:B (2.27) BS01 CA N/A N/A P0A910 N/A
    44457 9it8:A (1.954) BS04 CA N/A N/A P80025 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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