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BioLiP
Download all results in tab-seperated text for 9 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1oxr:A (1.93) BS01 AIN 3.1.1.4 GO:0004623 ... P60045 15823962 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=5.19, Kd=6.4uM
    2 1tgm:A (1.86) BS01 AIN 3.1.1.4 GO:0004623 ... P59071 N/A
    3 2qqt:A (2.5) BS01 AIN 1.11.1.7 GO:0004601 ... P80025 N/A
    4 3gcl:A (2.5) BS03 AIN 1.11.1.7 GO:0004601 ... P80025 19465478
    5 3iaz:A (2.0) BS01 AIN 3.4.21.- GO:0005576 ... P24627 20006955 MOAD: Kd=330uM
    6 4nsb:A (3.05) BS01 AIN ? GO:0005576 ... Q7YS85 N/A
    7 6mqf:A (1.693) BS01 AIN ? GO:0004623 ... Q9I834 30679550
    8 6mqf:B (1.693) BS01 AIN ? GO:0004623 ... Q9I834 30679550
    9 8j3w:A (3.07) BS01 AIN 7.6.2.-
    7.6.2.2
    7.6.2.3    		 GO:0001409 ... O15439 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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