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BioLiP
Download all results in tab-seperated text for 12079 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    9801 8dbf:L (2.2) BS01 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9802 8dbf:L (2.2) BS02 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9803 8dbf:L (2.2) BS03 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9804 8dbf:L (2.2) BS05 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9805 8dbo:A (2.5) BS01 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9806 8dbo:A (2.5) BS02 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9807 8dbo:A (2.5) BS03 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9808 8dbo:B (2.5) BS01 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9809 8dbo:B (2.5) BS02 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9810 8dbo:B (2.5) BS03 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9811 8dbo:C (2.5) BS01 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9812 8dbo:C (2.5) BS02 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9813 8dbo:C (2.5) BS03 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9814 8dbo:D (2.5) BS01 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9815 8dbo:D (2.5) BS02 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9816 8dbo:D (2.5) BS03 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9817 8dbo:E (2.5) BS01 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9818 8dbo:E (2.5) BS02 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9819 8dbo:E (2.5) BS03 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9820 8dbo:F (2.5) BS01 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9821 8dbo:F (2.5) BS02 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9822 8dbo:F (2.5) BS03 ADP 2.7.6.1 GO:0000287 ... P60891 36747094
    9823 8dbp:C (3.6) BS02 ADP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    9824 8dbp:D (3.6) BS02 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9825 8dbp:F (3.6) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9826 8dbq:D (4.0) BS02 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9827 8dbq:F (4.0) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9828 8dbr:B (3.2) BS02 ADP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    9829 8dbr:E (3.2) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9830 8dbr:F (3.2) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9831 8dbs:B (3.5) BS02 ADP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    9832 8dbs:E (3.5) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9833 8dbs:F (3.5) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9834 8dbt:B (3.1) BS02 ADP 7.1.2.2 GO:0005515 ... P0ABB0 36631659
    9835 8dbt:E (3.1) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9836 8dbt:F (3.1) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9837 8dbu:E (3.4) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9838 8dbu:F (3.4) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9839 8dbv:D (3.7) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9840 8dbv:E (3.7) BS02 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9841 8dbw:D (4.1) BS01 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9842 8dbw:E (4.1) BS02 ADP 7.1.2.2 GO:0005515 ... P0ABB4 36631659
    9843 8dd0:A (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    9844 8dd0:B (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    9845 8dd0:C (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    9846 8dd0:D (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    9847 8dd0:E (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    9848 8dd0:F (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36712934
    9849 8dfc:E (2.48) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9850 8dfc:E (2.48) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9851 8dfc:F (2.48) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9852 8dfc:F (2.48) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9853 8dfd:E (2.12) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9854 8dfd:E (2.12) BS05 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9855 8dfd:F (2.12) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9856 8dfd:F (2.12) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9857 8dfd:G (2.12) BS01 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9858 8dfd:G (2.12) BS04 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9859 8dfd:H (2.12) BS01 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9860 8dfd:H (2.12) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 38575747
    9861 8dmx:A (3.37) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36790143
    9862 8dmx:B (3.37) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36790143
    9863 8dmx:C (3.37) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36790143
    9864 8dmx:D (3.37) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36790143
    9865 8dmy:A (3.07) BS01 ADP 3.6.4.- GO:0005524 ... Q3ZC07 36790143
    9866 8dmy:B (3.07) BS01 ADP 3.6.4.- GO:0005524 ... Q3ZC07 36790143
    9867 8dmy:C (3.07) BS01 ADP 3.6.4.- GO:0005524 ... Q3ZC07 36790143
    9868 8dmy:D (3.07) BS01 ADP 3.6.4.- GO:0005524 ... Q3ZC07 36790143
    9869 8dnc:A (3.3) BS03 ADP ? GO:0005515 ... O67181 36064941
    9870 8dnf:A (3.38) BS01 ADP 3.6.4.- GO:0001525 ... P63261 36790143
    9871 8dnf:B (3.38) BS01 ADP 3.6.4.- GO:0001525 ... P63261 36790143
    9872 8dnf:C (3.38) BS01 ADP 3.6.4.- GO:0001525 ... P63261 36790143
    9873 8dnf:D (3.38) BS01 ADP 3.6.4.- GO:0001525 ... P63261 36790143
    9874 8dnh:A (2.99) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36790143
    9875 8dnh:B (2.99) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36790143
    9876 8dnh:C (2.99) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36790143
    9877 8dnh:D (2.99) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36790143
    9878 8dou:A (3.54) BS01 ADP ? GO:0005515 ... O67181 36064941
    9879 8dou:C (3.54) BS01 ADP ? GO:0005515 ... O67181 36064941
    9880 8dr6:E (2.39) BS02 ADP ? GO:0000077 ... P38251 35939393
    9881 8dvs:A (3.0) BS03 ADP 3.6.4.13 GO:0002230 ... O95786 36272408
    9882 8dvu:A (2.9) BS03 ADP 3.6.4.13 GO:0002230 ... O95786 36272408
    9883 8dyj:B (2.2) BS02 ADP 5.4.99.2 GO:0003824 ... P22033 36888659
    9884 8dyu:A (4.0) BS01 ADP ? GO:0005524 ... Q14204 36692009
    9885 8dyu:A (4.0) BS03 ADP ? GO:0005524 ... Q14204 36692009
    9886 8dyu:A (4.0) BS04 ADP ? GO:0005524 ... Q14204 36692009
    9887 8dyv:A (3.97) BS01 ADP ? GO:0005524 ... Q14204 36692009
    9888 8dyv:A (3.97) BS02 ADP ? GO:0005524 ... Q14204 36692009
    9889 8dyv:A (3.97) BS04 ADP ? GO:0005524 ... Q14204 36692009
    9890 8dzg:A (3.1) BS01 ADP ? GO:0000166 ... B7UTD6 36326250
    9891 8dzg:B (3.1) BS01 ADP ? GO:0000166 ... B7UTD6 36326250
    9892 8dzg:C (3.1) BS01 ADP ? GO:0000166 ... B7UTD6 36326250
    9893 8dzg:D (3.1) BS01 ADP ? GO:0000166 ... B7UTD6 36326250
    9894 8dzg:E (3.1) BS01 ADP ? GO:0000166 ... B7UTD6 36326250
    9895 8dzg:F (3.1) BS01 ADP ? GO:0000166 ... B7UTD6 36326250
    9896 8dzz:A (4.1) BS03 ADP ? GO:0005524 ... P36022 37620585
    9897 8dzz:D (4.1) BS03 ADP ? GO:0005524 ... P36022 37620585
    9898 8e00:A (3.6) BS03 ADP ? GO:0005524 ... P36022 37620585
    9899 8e1h:A (1.9) BS01 ADP 2.7.4.24 GO:0000829 ... O74429 36468882
    9900 8e3h:a (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9901 8e3h:a (6.5) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9902 8e3h:b (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9903 8e3h:b (6.5) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9904 8e3h:c (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9905 8e3h:c (6.5) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9906 8e3h:d (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9907 8e3h:d (6.5) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9908 8e3h:e (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9909 8e3h:e (6.5) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9910 8e3h:f (6.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9911 8e3h:f (6.5) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9912 8e5l:a (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9913 8e5l:a (4.2) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9914 8e5l:b (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9915 8e5l:b (4.2) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9916 8e5l:c (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9917 8e5l:c (4.2) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9918 8e5l:d (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9919 8e5l:d (4.2) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9920 8e5l:e (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9921 8e5l:e (4.2) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9922 8e5l:f (4.2) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9923 8e5l:f (4.2) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9924 8e5p:a (4.4) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9925 8e5p:a (4.4) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9926 8e5p:b (4.4) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9927 8e5p:b (4.4) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9928 8e5p:c (4.4) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9929 8e5p:c (4.4) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9930 8e5p:d (4.4) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9931 8e5p:d (4.4) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9932 8e5p:e (4.4) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9933 8e5p:e (4.4) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9934 8e5p:f (4.4) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9935 8e5p:f (4.4) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9936 8e6w:a (4.27) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9937 8e6w:a (4.27) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9938 8e6w:b (4.27) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9939 8e6w:b (4.27) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9940 8e6w:c (4.27) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9941 8e6w:c (4.27) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9942 8e6w:d (4.27) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9943 8e6w:d (4.27) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9944 8e6w:e (4.27) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9945 8e6w:e (4.27) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9946 8e6w:f (4.27) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9947 8e6w:f (4.27) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9948 8e70:a (4.1) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9949 8e70:a (4.1) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9950 8e70:b (4.1) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9951 8e70:b (4.1) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9952 8e70:c (4.1) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9953 8e70:c (4.1) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9954 8e70:d (4.1) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9955 8e70:d (4.1) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9956 8e70:e (4.1) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9957 8e70:e (4.1) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9958 8e70:f (4.1) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9959 8e70:f (4.1) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 36697824
    9960 8e7v:E (3.1) BS02 ADP ? GO:0005524 ... P0A6H1 N/A
    9961 8e7v:F (3.1) BS01 ADP ? GO:0005524 ... P0A6H1 N/A
    9962 8e8q:E (3.12) BS02 ADP ? GO:0005524 ... P0A6H1 N/A
    9963 8e8q:F (3.12) BS01 ADP ? GO:0005524 ... P0A6H1 N/A
    9964 8e91:E (2.57) BS02 ADP ? GO:0002020 ... P0A6H1 N/A
    9965 8e91:F (2.57) BS01 ADP ? GO:0002020 ... P0A6H1 N/A
    9966 8e9b:A (3.5) BS01 ADP ? GO:0003779 ... P32390 36442092
    9967 8e9b:H (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36442092
    9968 8e9b:I (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36442092
    9969 8e9b:M (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36442092
    9970 8e9b:N (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36442092
    9971 8e9b:O (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36442092
    9972 8e9b:P (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36442092
    9973 8e9b:Q (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36442092
    9974 8e9b:R (3.5) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36442092
    9975 8efe:A (3.8) BS02 ADP ? GO:0003774 ... P12883 36633586
    9976 8efh:A (3.3) BS02 ADP ? GO:0003774 ... P12883 36633586
    9977 8efh:B (3.3) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36633586
    9978 8efh:C (3.3) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36633586
    9979 8efh:D (3.3) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36633586
    9980 8efh:E (3.3) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36633586
    9981 8efh:F (3.3) BS01 ADP 3.6.4.- GO:0001725 ... P68137 36633586
    9982 8efi:B (3.4) BS01 ADP ? GO:0005515 ... B6VNT8 36459134
    9983 8efi:C (3.4) BS01 ADP ? GO:0005515 ... B6VNT8 36459134
    9984 8efi:D (3.4) BS01 ADP ? GO:0005515 ... B6VNT8 36459134
    9985 8efi:E (3.4) BS01 ADP ? GO:0005515 ... B6VNT8 36459134
    9986 8efi:F (3.4) BS01 ADP ? GO:0005515 ... B6VNT8 36459134
    9987 8efv:A (2.97) BS04 ADP 3.6.4.12 GO:0000400 ... Q5SL87 N/A
    9988 8efv:E (2.97) BS01 ADP 3.6.4.12 GO:0000400 ... Q5SL87 N/A
    9989 8efv:F (2.97) BS01 ADP 3.6.4.12 GO:0000400 ... Q5SL87 N/A
    9990 8efy:A (3.16) BS02 ADP 3.6.4.12 GO:0000400 ... Q5SL87 N/A
    9991 8efy:E (3.16) BS01 ADP 3.6.4.12 GO:0000400 ... Q5SL87 N/A
    9992 8efy:F (3.16) BS01 ADP 3.6.4.12 GO:0000400 ... Q5SL87 N/A
    9993 8efy:I (3.16) BS02 ADP 3.6.4.12 GO:0000400 ... Q5SL87 N/A
    9994 8efy:M (3.16) BS01 ADP 3.6.4.12 GO:0000400 ... Q5SL87 N/A
    9995 8efy:N (3.16) BS01 ADP 3.6.4.12 GO:0000400 ... Q5SL87 N/A
    9996 8egd:A (2.047) BS01 ADP 2.7.11.1
    2.7.11.4
    GO:0004672 ... Q00972 36717078
    9997 8egf:A (1.85) BS01 ADP 2.7.11.1
    2.7.11.4
    GO:0004672 ... Q00972 36717078
    9998 8egl:A (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    9999 8egl:B (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A
    10000 8egl:C (2.35) BS01 ADP 2.7.4.8 GO:0004385 ... Q9HTM2 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218