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BioLiP
Download all results in tab-seperated text for 12079 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    8801 7yly:z (3.05) BS01 ADP ? GO:0005524 ... P39079 36921056
    8802 7yne:A (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36252034
    8803 7yne:C (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36252034
    8804 7yne:E (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36252034
    8805 7yne:G (2.7) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36252034
    8806 7ypj:A (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8807 7ypj:B (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8808 7ypj:C (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8809 7ypj:D (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8810 7ypk:A (3.4) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8811 7ypk:B (3.4) BS02 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8812 7ypk:C (3.4) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8813 7ypk:D (3.4) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8814 7ypk:E (3.4) BS02 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8815 7ypk:F (3.4) BS02 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8816 7ypk:F (3.4) BS03 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8817 7yq0:A (1.58) BS01 ADP 2.7.1.25 GO:0000103 ... A0A101DF63 36592583
    8818 7yq0:B (1.58) BS01 ADP 2.7.1.25 GO:0000103 ... A0A101DF63 36592583
    8819 7yry:D (3.0) BS01 ADP 7.1.2.2 GO:0005524 ... A3M144 37318822
    8820 7yuv:A (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8821 7yuv:B (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8822 7yuv:C (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8823 7yuw:A (3.6) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8824 7yuw:B (3.6) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8825 7yuw:C (3.6) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8826 7yuw:D (3.6) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8827 7yux:A (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8828 7yux:B (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8829 7yux:C (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8830 7yux:D (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8831 7yux:E (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... A0A059VAZ3 37957149
    8832 7yzo:C (3.4) BS03 ADP ? GO:0000014 ... P13458 35987200
    8833 7yzo:C (3.4) BS05 ADP ? GO:0000014 ... P13458 35987200
    8834 7yzo:D (3.4) BS03 ADP ? GO:0000014 ... P13458 35987200
    8835 7yzo:D (3.4) BS04 ADP ? GO:0000014 ... P13458 35987200
    8836 7yzp:C (4.0) BS02 ADP ? GO:0000014 ... P13458 35987200
    8837 7yzp:C (4.0) BS04 ADP ? GO:0000014 ... P13458 35987200
    8838 7yzp:D (4.0) BS02 ADP ? GO:0000014 ... P13458 35987200
    8839 7yzp:D (4.0) BS03 ADP ? GO:0000014 ... P13458 35987200
    8840 7yzq:E (1.96) BS01 ADP ? GO:0000166 ... Q3AET8 35905315
    8841 7yzq:F (1.96) BS02 ADP ? GO:0000166 ... Q3AET8 35905315
    8842 7yzq:G (1.96) BS01 ADP ? GO:0000166 ... Q3AET8 35905315
    8843 7yzq:H (1.96) BS02 ADP ? GO:0000166 ... Q3AET8 35905315
    8844 7z03:C (3.7) BS02 ADP ? GO:0000014 ... P13458 35987200
    8845 7z03:C (3.7) BS04 ADP ? GO:0000014 ... P13458 35987200
    8846 7z03:D (3.7) BS03 ADP ? GO:0000014 ... P13458 35987200
    8847 7z03:D (3.7) BS04 ADP ? GO:0000014 ... P13458 35987200
    8848 7z13:4 (3.4) BS02 ADP 3.6.4.12 GO:0000727 ... P30665 35705812
    8849 7z13:4 (3.4) BS04 ADP 3.6.4.12 GO:0000727 ... P30665 35705812
    8850 7z13:6 (3.4) BS03 ADP 3.6.4.12 GO:0000727 ... P53091 35705812
    8851 7z13:c (3.4) BS02 ADP 3.6.4.12 GO:0000727 ... P30665 35705812
    8852 7z13:c (3.4) BS04 ADP 3.6.4.12 GO:0000727 ... P30665 35705812
    8853 7z13:e (3.4) BS03 ADP 3.6.4.12 GO:0000727 ... P53091 35705812
    8854 7z15:I (1.93) BS01 ADP ? GO:0000166 ... P16678 36813778
    8855 7z15:I (1.93) BS03 ADP ? GO:0000166 ... P16678 36813778
    8856 7z15:J (1.93) BS01 ADP ? GO:0000166 ... P16678 36813778
    8857 7z15:J (1.93) BS02 ADP ? GO:0000166 ... P16678 36813778
    8858 7z7h:A (3.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    8859 7z7h:B (3.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    8860 7z7h:C (3.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    8861 7z7h:D (3.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    8862 7z7h:E (3.8) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    8863 7z7i:A (3.5) BS02 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    8864 7z7i:B (3.5) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    8865 7z7i:C (3.5) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    8866 7z7i:D (3.5) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    8867 7z7i:E (3.5) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35858890
    8868 7z8f:A (20.0) BS01 ADP ? N/A F2Z5G5 36071160
    8869 7z8f:B (20.0) BS01 ADP ? N/A F2Z5G5 36071160
    8870 7z8f:C (20.0) BS01 ADP ? N/A F2Z5G5 36071160
    8871 7z8f:D (20.0) BS01 ADP ? N/A F2Z5G5 36071160
    8872 7z8f:E (20.0) BS01 ADP ? N/A F2Z5G5 36071160
    8873 7z8f:F (20.0) BS01 ADP ? N/A F2Z5G5 36071160
    8874 7z8f:G (20.0) BS01 ADP ? N/A F2Z5G5 36071160
    8875 7z8f:H (20.0) BS01 ADP 3.6.4.- GO:0005515 ... Q6QAQ1 36071160
    8876 7z8f:I (20.0) BS01 ADP ? N/A F2Z5G5 36071160
    8877 7z8f:e (20.0) BS01 ADP ? GO:0003723 ... Q14204 36071160
    8878 7z8f:f (20.0) BS01 ADP ? GO:0003723 ... Q14204 36071160
    8879 7z8f:m (20.0) BS01 ADP ? GO:0003723 ... Q14204 36071160
    8880 7z8f:n (20.0) BS01 ADP ? GO:0003723 ... Q14204 36071160
    8881 7z8g:A (3.52) BS01 ADP ? GO:0003723 ... Q14204 36071160
    8882 7z8h:A (3.41) BS01 ADP ? GO:0003723 ... Q14204 36071160
    8883 7z8i:A (3.3) BS01 ADP ? N/A F2Z5G5 36071160
    8884 7z8i:B (3.3) BS01 ADP ? N/A F2Z5G5 36071160
    8885 7z8i:C (3.3) BS01 ADP ? N/A F2Z5G5 36071160
    8886 7z8i:D (3.3) BS01 ADP ? N/A F2Z5G5 36071160
    8887 7z8i:E (3.3) BS01 ADP ? N/A F2Z5G5 36071160
    8888 7z8i:F (3.3) BS01 ADP ? N/A F2Z5G5 36071160
    8889 7z8l:f (4.9) BS01 ADP ? GO:0003723 ... Q14204 36071160
    8890 7z8m:G (3.37) BS01 ADP ? N/A F2Z5G5 36071160
    8891 7z8m:H (3.37) BS01 ADP 3.6.4.- GO:0005515 ... Q6QAQ1 36071160
    8892 7z8m:I (3.37) BS02 ADP ? N/A F2Z5G5 36071160
    8893 7zbg:A (2.3) BS01 ADP 5.6.2.2 GO:0003677 ... Q02880 35660158
    8894 7zbh:A (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    8895 7zbh:B (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    8896 7zbh:D (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    8897 7zbh:F (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    8898 7zbh:I (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    8899 7zbh:K (3.3) BS01 ADP 3.4.24.- GO:0004176 ... O51729 N/A
    8900 7zda:C (3.17) BS02 ADP 7.4.2.- GO:0005524 ... P23886 37095238
    8901 7zdb:C (3.35) BS03 ADP 7.4.2.- GO:0005524 ... P23886 37095238
    8902 7zdc:D (3.13) BS03 ADP 7.4.2.- GO:0005524 ... P29018 37095238
    8903 7zgu:A (3.4) BS01 ADP 3.6.4.- N/A Q96P20 N/A
    8904 7zgu:B (3.4) BS01 ADP 3.6.4.- N/A Q96P20 N/A
    8905 7zgu:C (3.4) BS01 ADP 3.6.4.- N/A Q96P20 N/A
    8906 7zgu:D (3.4) BS01 ADP 3.6.4.- N/A Q96P20 N/A
    8907 7zgu:E (3.4) BS01 ADP 3.6.4.- N/A Q96P20 N/A
    8908 7zgu:F (3.4) BS01 ADP 3.6.4.- N/A Q96P20 N/A
    8909 7zi4:A (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 N/A
    8910 7zi4:B (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 N/A
    8911 7zi4:C (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 N/A
    8912 7zi4:D (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 N/A
    8913 7zi4:E (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y265 N/A
    8914 7zi4:F (3.2) BS01 ADP 3.6.4.12 GO:0000492 ... Q9Y230 N/A
    8915 7zi4:G (3.2) BS03 ADP 3.6.4.- GO:0000070 ... Q9ULG1 N/A
    8916 7zi4:H (3.2) BS01 ADP ? GO:0000723 ... Q9H9F9 N/A
    8917 7zke:E (3.6) BS03 ADP ? GO:0003677 ... G0S6C0 37106137
    8918 7zlw:A (2.2) BS01 ADP 2.7.4.6 GO:0000287 ... P15532 37672589
    8919 7zlw:B (2.2) BS01 ADP 2.7.4.6 GO:0000287 ... P15532 37672589
    8920 7zlw:C (2.2) BS01 ADP 2.7.4.6 GO:0000287 ... P15532 37672589
    8921 7zlw:D (2.2) BS01 ADP 2.7.4.6 GO:0000287 ... P15532 37672589
    8922 7zlw:F (2.2) BS01 ADP 2.7.4.6 GO:0000287 ... P15532 37672589
    8923 7znu:A (4.0) BS01 ADP 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    8924 7znu:A (4.0) BS03 ADP 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    8925 7znu:B (4.0) BS01 ADP 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    8926 7znu:B (4.0) BS02 ADP 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    8927 7zo9:A (3.5) BS01 ADP 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    8928 7zo9:B (3.5) BS01 ADP 7.5.2.3 GO:0005515 ... Q2YQ73 36456825
    8929 7zp9:A (2.82) BS01 ADP ? GO:0005524 ... O87952 N/A
    8930 7zp9:B (2.82) BS01 ADP ? GO:0005524 ... O87952 N/A
    8931 7zp9:D (2.82) BS01 ADP ? GO:0005524 ... O87952 N/A
    8932 7zp9:E (2.82) BS01 ADP ? GO:0005524 ... O87952 N/A
    8933 7zp9:F (2.82) BS01 ADP ? GO:0005524 ... O87952 N/A
    8934 7zp9:H (2.82) BS01 ADP ? GO:0005524 ... O87952 N/A
    8935 7zp9:J (2.82) BS01 ADP ? GO:0005524 ... O87952 N/A
    8936 7zp9:L (2.82) BS01 ADP ? GO:0005524 ... O87952 N/A
    8937 7zpo:A (3.24) BS01 ADP ? GO:0005524 ... O87952 N/A
    8938 7zpo:B (3.24) BS01 ADP ? GO:0005524 ... O87952 N/A
    8939 7zpo:D (3.24) BS01 ADP ? GO:0005524 ... O87952 N/A
    8940 7zpo:E (3.24) BS01 ADP ? GO:0005524 ... O87952 N/A
    8941 7zpo:F (3.24) BS01 ADP ? GO:0005524 ... O87952 N/A
    8942 7zpo:H (3.24) BS01 ADP ? GO:0005524 ... O87952 N/A
    8943 7zpo:J (3.24) BS01 ADP ? GO:0005524 ... O87952 N/A
    8944 7zpo:L (3.24) BS01 ADP ? GO:0005524 ... O87952 N/A
    8945 7zpr:A (3.56) BS01 ADP ? GO:0005524 ... O87952 N/A
    8946 7zpr:B (3.56) BS01 ADP ? GO:0005524 ... O87952 N/A
    8947 7zpr:D (3.56) BS01 ADP ? GO:0005524 ... O87952 N/A
    8948 7zpr:E (3.56) BS01 ADP ? GO:0005524 ... O87952 N/A
    8949 7zpr:F (3.56) BS01 ADP ? GO:0005524 ... O87952 N/A
    8950 7zpr:H (3.56) BS01 ADP ? GO:0005524 ... O87952 N/A
    8951 7zpr:J (3.56) BS01 ADP ? GO:0005524 ... O87952 N/A
    8952 7zpr:L (3.56) BS01 ADP ? GO:0005524 ... O87952 N/A
    8953 7zrk:B (3.1) BS02 ADP 7.2.2.6 GO:0000166 ... P03960 36255052
    8954 7zrm:B (3.7) BS02 ADP 7.2.2.6 GO:0000166 ... P03960 36255052
    8955 7ztc:A (3.9) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8956 7ztc:B (3.9) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8957 7ztc:C (3.9) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8958 7ztc:D (3.9) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8959 7ztc:E (3.9) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8960 7ztc:F (3.9) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8961 7ztc:G (3.9) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8962 7ztc:H (3.9) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8963 7ztd:A (4.6) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8964 7ztd:B (4.6) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8965 7ztd:C (4.6) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8966 7ztd:D (4.6) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8967 7ztd:E (4.6) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8968 7ztd:F (4.6) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8969 7ztd:G (4.6) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8970 7ztd:H (4.6) BS01 ADP 3.6.4.- GO:0000079 ... P60709 36586407
    8971 7ztl:A (1.9) BS02 ADP 2.7.11.1 GO:0004672 ... O14965 36601802
    8972 7zub:A (2.85) BS01 ADP ? GO:0001890 ... P08238 36385050
    8973 7zub:B (2.85) BS01 ADP ? GO:0001890 ... P08238 36385050
    8974 7zvs:A (3.07) BS01 ADP 2.7.10.1 GO:0004672 ... A0A3Q0KQ92 36385939
    8975 7zvs:B (3.07) BS01 ADP 2.7.10.1 GO:0004672 ... A0A3Q0KQ92 36385939
    8976 7zy0:A (1.44) BS02 ADP 2.7.11.1 GO:0004672 ... P68400 36426237
    8977 7zyk:A (1.31) BS01 ADP 2.7.11.1 GO:0004672 ... P68400 36426237
    8978 7zyy:A (2.12) BS03 ADP N/A GO:0003824 ... N/A 36261450
    8979 7zyy:B (2.12) BS03 ADP N/A GO:0003824 ... N/A 36261450
    8980 7zyy:C (2.12) BS04 ADP N/A GO:0003824 ... N/A 36261450
    8981 7zyy:D (2.12) BS04 ADP N/A GO:0003824 ... N/A 36261450
    8982 7zz3:B (2.41) BS03 ADP N/A GO:0003824 ... N/A 36261450
    8983 7zz3:C (2.41) BS04 ADP N/A GO:0003824 ... N/A 36261450
    8984 7zz3:D (2.41) BS04 ADP N/A GO:0003824 ... N/A 36261450
    8985 7zz8:A (3.29) BS02 ADP N/A GO:0003824 ... N/A 36261450
    8986 7zz8:B (3.29) BS03 ADP N/A GO:0003824 ... N/A 36261450
    8987 7zz8:C (3.29) BS05 ADP N/A GO:0003824 ... N/A 36261450
    8988 7zz8:D (3.29) BS04 ADP N/A GO:0003824 ... N/A 36261450
    8989 8a12:A (2.03) BS01 ADP ? GO:0000146 ... Q8IDR3 37308472
    8990 8a2r:A (2.17) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    8991 8a2r:B (2.17) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    8992 8a2r:C (2.17) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    8993 8a2r:D (2.17) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    8994 8a2r:E (2.17) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    8995 8a2s:A (2.22) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    8996 8a2s:B (2.22) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    8997 8a2s:C (2.22) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    8998 8a2s:D (2.22) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    8999 8a2s:E (2.22) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337
    9000 8a2t:A (2.24) BS01 ADP 3.6.4.- GO:0000287 ... P68135 36289337

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218