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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 12079 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    8001 7s9w:A (3.4) BS02 ADP N/A N/A N/A 35624106
    8002 7sgz:E (3.17) BS01 ADP ? GO:0000077 ... P38251 35314830
    8003 7sh1:A (2.04) BS01 ADP ? GO:0003677 ... Q0X0A9 37198233
    8004 7sh1:A (2.04) BS02 ADP ? GO:0003677 ... Q0X0A9 37198233
    8005 7sh1:B (2.04) BS01 ADP ? GO:0003677 ... Q0X0A9 37198233
    8006 7sh1:B (2.04) BS02 ADP ? GO:0003677 ... Q0X0A9 37198233
    8007 7sh2:E (3.23) BS02 ADP ? GO:0000077 ... P38251 35314830
    8008 7snb:A (1.11) BS02 ADP ? GO:0004371 ... Q2FZ58 N/A
    8009 7sq0:A (3.7) BS01 ADP 3.6.-.- GO:0005524 ... A8B3G9 35851188
    8010 7sq0:B (3.7) BS02 ADP 3.6.-.- GO:0005524 ... A8B3G9 35851188
    8011 7sqc:1A (3.8) BS01 ADP 2.7.4.3 GO:0004017 ... A0A2K3D425 35578023
    8012 7sqc:1B (3.8) BS01 ADP 2.7.4.3 GO:0004017 ... A0A2K3D425 35578023
    8013 7sqc:1C (3.8) BS01 ADP 2.7.4.3 GO:0004017 ... A0A2K3D425 35578023
    8014 7sqc:1D (3.8) BS01 ADP 2.7.4.3 GO:0004017 ... A0A2K3D425 35578023
    8015 7st9:E (2.2) BS03 ADP ? GO:0000077 ... P38251 35314831
    8016 7stb:E (2.72) BS02 ADP ? GO:0000077 ... P38251 35314831
    8017 7ste:B (2.73) BS01 ADP ? GO:0000077 ... P40339 35314831
    8018 7ste:C (2.73) BS01 ADP ? GO:0000077 ... P38629 35314831
    8019 7ste:D (2.73) BS01 ADP ? GO:0000076 ... P40348 35314831
    8020 7ste:E (2.73) BS01 ADP ? GO:0000077 ... P38251 35314831
    8021 7swl:E (2.88) BS03 ADP ? GO:0005524 ... G0RZG1 36090660
    8022 7sx8:A (9.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8023 7sx8:B (9.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8024 7sx8:C (9.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8025 7sx8:E (9.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8026 7sx8:G (9.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8027 7sx8:H (9.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8028 7sx9:A (10.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8029 7sx9:B (10.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8030 7sx9:C (10.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8031 7sx9:E (10.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8032 7sx9:G (10.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8033 7sx9:H (10.0) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8034 7sxa:B (6.87) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8035 7sxa:C (6.87) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8036 7sxa:D (6.87) BS01 ADP 3.6.4.- GO:0001725 ... P68139 36067297
    8037 7sxo:B (3.3) BS01 ADP 3.4.21.53 GO:0004176 ... P36775 35143841
    8038 7sxo:C (3.3) BS01 ADP 3.4.21.53 GO:0004176 ... P36775 35143841
    8039 7t0v:E (3.67) BS03 ADP ? GO:0003723 ... G0RZG1 36090660
    8040 7t0v:F (3.67) BS01 ADP ? GO:0003723 ... G0RZG1 36090660
    8041 7t21:A (5.4) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8042 7t21:B (5.4) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8043 7t21:B (5.4) BS05 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8044 7t21:C (5.4) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8045 7t21:C (5.4) BS04 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8046 7t21:D (5.4) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8047 7t21:D (5.4) BS04 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8048 7t21:E (5.4) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8049 7t21:E (5.4) BS05 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8050 7t21:F (5.4) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8051 7t22:A (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8052 7t22:B (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8053 7t22:B (4.2) BS05 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8054 7t22:C (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8055 7t22:C (4.2) BS05 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8056 7t22:D (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8057 7t22:D (4.2) BS05 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8058 7t22:E (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8059 7t22:E (4.2) BS04 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8060 7t22:F (4.2) BS01 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8061 7t23:A (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8062 7t23:B (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8063 7t23:B (4.2) BS05 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8064 7t23:C (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8065 7t23:C (4.2) BS05 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8066 7t23:D (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8067 7t23:D (4.2) BS05 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8068 7t23:E (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8069 7t23:E (4.2) BS05 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8070 7t23:F (4.2) BS02 ADP 3.6.4.12 GO:0003677 ... P0ACB0 N/A
    8071 7t4h:A (1.51) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8072 7t5q:H (3.4) BS01 ADP 3.6.4.- GO:0000287 ... P68135 N/A
    8073 7t6f:A (3.6) BS02 ADP 2.7.10.2 GO:0004672 ... P52332 35271300
    8074 7t6f:B (3.6) BS02 ADP 2.7.10.2 GO:0004672 ... P52332 35271300
    8075 7tdo:A (3.15) BS01 ADP 3.4.24.- GO:0004176 ... Q9WZ49 35322207
    8076 7tdo:B (3.15) BS01 ADP 3.4.24.- GO:0004176 ... Q9WZ49 35322207
    8077 7tdo:C (3.15) BS01 ADP 3.4.24.- GO:0004176 ... Q9WZ49 35322207
    8078 7tdo:D (3.15) BS01 ADP 3.4.24.- GO:0004176 ... Q9WZ49 35322207
    8079 7tdo:E (3.15) BS01 ADP 3.4.24.- GO:0004176 ... Q9WZ49 35322207
    8080 7tdo:F (3.15) BS01 ADP 3.4.24.- GO:0004176 ... Q9WZ49 35322207
    8081 7tdp:A (1.98) BS01 ADP 6.3.1.2 GO:0003824 ... A0A0F0G8G2 35778410
    8082 7tdp:B (1.98) BS01 ADP 6.3.1.2 GO:0003824 ... A0A0F0G8G2 35778410
    8083 7tdp:C (1.98) BS01 ADP 6.3.1.2 GO:0003824 ... A0A0F0G8G2 35778410
    8084 7tdv:A (2.92) BS01 ADP 6.3.1.2 GO:0003824 ... E3VXC2 35778410
    8085 7tdv:B (2.92) BS01 ADP 6.3.1.2 GO:0003824 ... E3VXC2 35778410
    8086 7tdv:C (2.92) BS01 ADP 6.3.1.2 GO:0003824 ... E3VXC2 35778410
    8087 7tdv:D (2.92) BS01 ADP 6.3.1.2 GO:0003824 ... E3VXC2 35778410
    8088 7tdv:E (2.92) BS01 ADP 6.3.1.2 GO:0003824 ... E3VXC2 35778410
    8089 7tdv:H (2.92) BS01 ADP 6.3.1.2 GO:0003824 ... E3VXC2 35778410
    8090 7ten:A (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8091 7ten:B (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8092 7ten:D (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8093 7ten:E (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8094 7ten:H (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8095 7ten:J (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8096 7ten:M (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8097 7ten:O (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8098 7ten:Q (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8099 7ten:S (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8100 7ten:U (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8101 7ten:W (3.5) BS01 ADP 6.3.1.2 GO:0003824 ... A0A5D5GA79 35778410
    8102 7tfh:E (3.09) BS01 ADP ? GO:0000077 ... P38251 35829698
    8103 7tfi:E (3.41) BS02 ADP ? GO:0000077 ... P38251 35829698
    8104 7tfj:E (3.3) BS02 ADP ? GO:0000077 ... P38251 35829698
    8105 7tfk:E (3.25) BS03 ADP ? GO:0000077 ... P38251 35829698
    8106 7tfl:E (3.33) BS03 ADP ? GO:0000077 ... P38251 35829698
    8107 7tgh:B8 (2.6) BS02 ADP ? N/A I7M855 35357889
    8108 7tgh:B9 (2.6) BS01 ADP ? N/A Q233X7 35357889
    8109 7thj:E (3.8) BS01 ADP ? GO:0000077 ... P38251 35179493
    8110 7thv:E (4.0) BS01 ADP ? GO:0000077 ... P38251 35179493
    8111 7ti7:A (1.5) BS01 ADP 6.3.2.9 GO:0005524 ... B7H1N2 N/A
    8112 7ti8:E (3.5) BS01 ADP ? GO:0000077 ... P38251 35179493
    8113 7tib:E (3.4) BS03 ADP ? GO:0000077 ... P38251 35179493
    8114 7tic:E (3.9) BS01 ADP ? GO:0000077 ... P38251 35179493
    8115 7tid:E (3.3) BS03 ADP ? GO:0000077 ... P38251 35179493
    8116 7tjs:D (3.2) BS01 ADP 7.1.2.2 GO:0005524 ... N/A 35468906
    8117 7tjv:D (3.6) BS01 ADP 7.1.2.2 GO:0005515 ... P00830 35468906
    8118 7tjx:D (4.0) BS01 ADP 7.1.2.2 GO:0005515 ... P00830 35468906
    8119 7tku:E (4.0) BS01 ADP ? GO:0000077 ... P38251 35179493
    8120 7tmm:A (3.5) BS01 ADP 3.1.-.-
    7.1.2.2
    GO:0005524 ... P17255 35469063
    8121 7tmm:B (3.5) BS01 ADP ? GO:0000139 ... P16140 35469063
    8122 7tmo:E (3.3) BS01 ADP 3.1.-.-
    7.1.2.2
    GO:0005524 ... P17255 35469063
    8123 7tmp:A (3.3) BS01 ADP 3.1.-.-
    7.1.2.2
    GO:0005524 ... P17255 35469063
    8124 7tmp:B (3.3) BS01 ADP ? GO:0000139 ... P16140 35469063
    8125 7tmq:A (3.3) BS01 ADP 3.1.-.-
    7.1.2.2
    GO:0005524 ... P17255 35469063
    8126 7tmr:E (3.5) BS01 ADP 3.1.-.-
    7.1.2.2
    GO:0005524 ... P17255 35469063
    8127 7tms:E (3.8) BS01 ADP 7.1.2.2 GO:0000329 ... B3LH69 35469063
    8128 7tmt:E (3.8) BS01 ADP 7.1.2.2 GO:0000329 ... B3LH69 35469063
    8129 7tne:A (1.39) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8130 7to2:A (3.2) BS03 ADP 3.6.4.13 GO:0002230 ... O95786 36272408
    8131 7to3:C (2.74) BS03 ADP 2.7.7.- GO:0005524 ... P0DSP4 36755092
    8132 7to3:D (2.74) BS03 ADP 2.7.7.- GO:0005524 ... P0DSP4 36755092
    8133 7tpn:A (1.38) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8134 7tpo:A (1.35) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8135 7tpt:A (3.9) BS01 ADP ? GO:0003779 ... P61157 35622886
    8136 7tpt:B (3.9) BS02 ADP ? GO:0003779 ... A7MB62 35622886
    8137 7tpt:H (3.9) BS02 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8138 7tpt:I (3.9) BS03 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8139 7tpt:J (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8140 7tpt:K (3.9) BS02 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8141 7tpt:L (3.9) BS02 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8142 7tpt:M (3.9) BS02 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8143 7tpt:N (3.9) BS02 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8144 7tpt:O (3.9) BS03 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8145 7tpt:P (3.9) BS03 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8146 7tpt:Q (3.9) BS03 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8147 7tpt:R (3.9) BS02 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8148 7tpt:S (3.9) BS03 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8149 7tpt:T (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8150 7tpt:U (3.9) BS01 ADP 3.6.4.- GO:0000287 ... P68135 35622886
    8151 7tpv:A (1.49) BS01 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8152 7tpw:A (1.18) BS01 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8153 7tpx:A (1.35) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8154 7tpy:A (1.48) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8155 7tpz:A (1.71) BS02 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8156 7tq0:A (1.81) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8157 7tq9:A (1.6) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8158 7tqc:A (1.53) BS01 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8159 7tqd:C (2.9) BS04 ADP 2.7.7.- GO:0005524 ... P0DSP4 36755092
    8160 7tqe:A (1.59) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8161 7tqf:A (1.45) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8162 7tqh:A (1.49) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8163 7tqi:A (1.47) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8164 7tqj:A (1.48) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8165 7tqk:A (1.48) BS03 ADP 1.18.6.1 GO:0005524 ... P00459 35904245
    8166 7tqy:K (2.6) BS02 ADP ? GO:0003777 ... A0A1D8PKA4 35859148
    8167 7trg:B (3.0) BS01 ADP ? GO:0002199 ... P50990 36493755
    8168 7trg:C (3.0) BS01 ADP ? GO:0005524 ... Q99832 36493755
    8169 7trg:D (3.0) BS01 ADP ? GO:0003730 ... P48643 36493755
    8170 7trg:E (3.0) BS01 ADP ? GO:0002199 ... P78371 36493755
    8171 7trg:F (3.0) BS01 ADP ? GO:0002199 ... P50991 36493755
    8172 7trg:G (3.0) BS01 ADP ? GO:0000242 ... P17987 36493755
    8173 7trg:H (3.0) BS01 ADP ? GO:0002199 ... P49368 36493755
    8174 7trg:I (3.0) BS01 ADP ? GO:0003723 ... P40227 36493755
    8175 7ttn:B (3.3) BS02 ADP ? GO:0002199 ... P50990 36493755
    8176 7ttn:C (3.3) BS01 ADP ? GO:0005524 ... Q99832 36493755
    8177 7ttn:D (3.3) BS01 ADP ? GO:0003730 ... P48643 36493755
    8178 7ttn:E (3.3) BS01 ADP ? GO:0002199 ... P78371 36493755
    8179 7ttn:F (3.3) BS01 ADP ? GO:0002199 ... P50991 36493755
    8180 7ttn:G (3.3) BS01 ADP ? GO:0000242 ... P17987 36493755
    8181 7ttn:H (3.3) BS01 ADP ? GO:0002199 ... P49368 36493755
    8182 7ttn:I (3.3) BS01 ADP ? GO:0003723 ... P40227 36493755
    8183 7ttr:A (2.96) BS02 ADP 3.6.1.- GO:0005524 ... Q9H078 36170828
    8184 7tts:A (2.9) BS02 ADP 3.6.1.- GO:0005524 ... Q9H078 36170828
    8185 7ttt:B (2.9) BS01 ADP ? GO:0002199 ... P50990 36493755
    8186 7ttt:C (2.9) BS01 ADP ? GO:0005524 ... Q99832 36493755
    8187 7ttt:D (2.9) BS01 ADP ? GO:0003730 ... P48643 36493755
    8188 7ttt:E (2.9) BS01 ADP ? GO:0002199 ... P78371 36493755
    8189 7ttt:F (2.9) BS01 ADP ? GO:0002199 ... P50991 36493755
    8190 7ttt:G (2.9) BS01 ADP ? GO:0000242 ... P17987 36493755
    8191 7ttt:H (2.9) BS01 ADP ? GO:0002199 ... P49368 36493755
    8192 7ttt:I (2.9) BS01 ADP ? GO:0003723 ... P40227 36493755
    8193 7tub:B (3.6) BS01 ADP ? GO:0002199 ... P50990 36493755
    8194 7tub:C (3.6) BS02 ADP ? GO:0005524 ... Q99832 36493755
    8195 7tub:D (3.6) BS01 ADP ? GO:0003730 ... P48643 36493755
    8196 7tub:E (3.6) BS01 ADP ? GO:0002199 ... P78371 36493755
    8197 7tub:F (3.6) BS01 ADP ? GO:0002199 ... P50991 36493755
    8198 7tub:G (3.6) BS01 ADP ? GO:0000242 ... P17987 36493755
    8199 7tub:H (3.6) BS01 ADP ? GO:0002199 ... P49368 36493755
    8200 7tub:I (3.6) BS02 ADP ? GO:0003723 ... P40227 36493755

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218