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BioLiP
Download all results in tab-seperated text for 12079 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7201 7lt3:L (4.6) BS04 ADP 2.7.11.1 GO:0000460 ... P78527 33854234
    7202 7lvr:K (2.9) BS02 ADP ? GO:0003777 ... L0N7N1 34131133
    7203 7lw1:A (2.9) BS04 ADP 2.7.1.11 GO:0003872 ... P17858 34320407
    7204 7lw1:D (2.9) BS06 ADP 2.7.1.11 GO:0003872 ... P17858 34320407
    7205 7lw1:E (2.9) BS04 ADP 2.7.1.11 GO:0003872 ... P17858 34320407
    7206 7lw1:F (2.9) BS06 ADP 2.7.1.11 GO:0003872 ... P17858 34320407
    7207 7m74:G (3.93) BS02 ADP ? GO:0004672 ... P54619 34437114
    7208 7m7a:A (3.2) BS01 ADP 3.1.3.64 N/A Q5ZRA8 33927055
    7209 7m7a:B (3.2) BS01 ADP 3.1.3.64 N/A Q5ZRA8 33927055
    7210 7m7a:C (3.2) BS01 ADP 3.1.3.64 N/A Q5ZRA8 33927055
    7211 7m7a:D (3.2) BS01 ADP 3.1.3.64 N/A Q5ZRA8 33927055
    7212 7m9a:B (3.9) BS01 ADP N/A N/A N/A 34385391
    7213 7m9a:C (3.9) BS01 ADP N/A N/A N/A 34385391
    7214 7m9a:D (3.9) BS01 ADP N/A N/A N/A 34385391
    7215 7m9a:E (3.9) BS01 ADP N/A N/A N/A 34385391
    7216 7m9a:F (3.9) BS01 ADP N/A N/A N/A 34385391
    7217 7m9a:H (3.9) BS02 ADP N/A N/A N/A 34385391
    7218 7m9a:I (3.9) BS02 ADP N/A N/A N/A 34385391
    7219 7m9a:J (3.9) BS02 ADP N/A N/A N/A 34385391
    7220 7m9a:K (3.9) BS02 ADP N/A N/A N/A 34385391
    7221 7m9a:L (3.9) BS01 ADP N/A N/A N/A 34385391
    7222 7m9b:B (3.8) BS01 ADP N/A N/A N/A 34385391
    7223 7m9b:C (3.8) BS01 ADP N/A N/A N/A 34385391
    7224 7m9b:D (3.8) BS01 ADP N/A N/A N/A 34385391
    7225 7m9b:E (3.8) BS01 ADP N/A N/A N/A 34385391
    7226 7m9b:F (3.8) BS01 ADP N/A N/A N/A 34385391
    7227 7m9b:H (3.8) BS02 ADP N/A N/A N/A 34385391
    7228 7m9b:I (3.8) BS02 ADP N/A N/A N/A 34385391
    7229 7m9b:J (3.8) BS02 ADP N/A N/A N/A 34385391
    7230 7m9b:K (3.8) BS02 ADP N/A N/A N/A 34385391
    7231 7m9b:L (3.8) BS01 ADP N/A N/A N/A 34385391
    7232 7m9c:B (4.2) BS01 ADP N/A N/A N/A 34385391
    7233 7m9c:C (4.2) BS01 ADP N/A N/A N/A 34385391
    7234 7m9c:D (4.2) BS01 ADP N/A N/A N/A 34385391
    7235 7m9c:E (4.2) BS01 ADP N/A N/A N/A 34385391
    7236 7m9c:F (4.2) BS01 ADP N/A N/A N/A 34385391
    7237 7m9c:H (4.2) BS01 ADP N/A N/A N/A 34385391
    7238 7m9c:I (4.2) BS02 ADP N/A N/A N/A 34385391
    7239 7m9c:J (4.2) BS02 ADP N/A N/A N/A 34385391
    7240 7m9c:K (4.2) BS01 ADP N/A N/A N/A 34385391
    7241 7m9c:L (4.2) BS01 ADP N/A N/A N/A 34385391
    7242 7mbw:A (3.2) BS01 ADP ? GO:0003677 ... P05846 35173349
    7243 7mbw:B (3.2) BS01 ADP ? GO:0003677 ... P05846 35173349
    7244 7mbw:C (3.2) BS01 ADP ? GO:0003677 ... P05846 35173349
    7245 7mbw:D (3.2) BS01 ADP ? GO:0003677 ... P05846 35173349
    7246 7mdm:A (4.86) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7247 7mdm:B (4.86) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7248 7mdm:C (4.86) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7249 7mdm:D (4.86) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7250 7mdm:E (4.86) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7251 7mdm:F (4.86) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7252 7mdo:A (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7253 7mdo:B (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7254 7mdo:C (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7255 7mdo:D (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7256 7mdo:E (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7257 7mdo:F (4.12) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 34405853
    7258 7mf3:A (3.4) BS01 ADP ? GO:0000146 ... P10587 34936462
    7259 7mf3:B (3.4) BS01 ADP ? GO:0000146 ... P10587 34936462
    7260 7mgm:A (3.1) BS04 ADP ? GO:0005524 ... P36022 34994688
    7261 7mgv:A (2.44) BS03 ADP N/A N/A N/A 34028251
    7262 7mgv:B (2.44) BS04 ADP N/A N/A N/A 34028251
    7263 7mhb:A (2.6) BS01 ADP ? GO:0005524 ... Q2YQZ4 N/A
    7264 7mhb:B (2.6) BS01 ADP ? GO:0005524 ... Q2YQZ4 N/A
    7265 7mhs:A (3.6) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7266 7mhs:A (3.6) BS04 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7267 7mhs:B (3.6) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7268 7mhs:B (3.6) BS04 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7269 7mhs:C (3.6) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7270 7mhs:C (3.6) BS03 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7271 7mhs:C (3.6) BS05 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7272 7mhs:D (3.6) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7273 7mhs:D (3.6) BS04 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7274 7mhs:E (3.6) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7275 7mhs:E (3.6) BS03 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7276 7mhs:E (3.6) BS04 ADP 3.6.4.6 GO:0000502 ... P55072 35552390
    7277 7moq:C (8.0) BS01 ADP ? GO:0005524 ... Q22A67 34338432
    7278 7moq:C (8.0) BS03 ADP ? GO:0005524 ... Q22A67 34338432
    7279 7mqj:A (2.23) BS01 ADP 3.6.4.13 GO:0003676 ... Q04217 34516797
    7280 7msm:x (2.79) BS04 ADP 3.6.1.- GO:0000049 ... P9WQK3 35064151
    7281 7msm:x (2.79) BS05 ADP 3.6.1.- GO:0000049 ... P9WQK3 35064151
    7282 7msz:x (3.1) BS04 ADP 3.6.1.- GO:0000049 ... P9WQK3 35064151
    7283 7msz:x (3.1) BS05 ADP 3.6.1.- GO:0000049 ... P9WQK3 35064151
    7284 7mu0:A (2.9) BS01 ADP 3.6.1.- GO:0000049 ... P9WQK3 35064151
    7285 7mu0:A (2.9) BS02 ADP 3.6.1.- GO:0000049 ... P9WQK3 35064151
    7286 7mu0:B (2.9) BS01 ADP 3.6.1.- GO:0000049 ... P9WQK3 35064151
    7287 7mu0:B (2.9) BS02 ADP 3.6.1.- GO:0000049 ... P9WQK3 35064151
    7288 7n46:A (2.21) BS01 ADP N/A GO:0005524 ... N/A 34453889
    7289 7n5a:A (3.95) BS01 ADP ? GO:0005524 ... Q9LVM1 35333177
    7290 7n5a:A (3.95) BS02 ADP ? GO:0005524 ... Q9LVM1 35333177
    7291 7n5a:B (3.95) BS01 ADP ? GO:0005524 ... Q9LVM1 35333177
    7292 7n5a:B (3.95) BS02 ADP ? GO:0005524 ... Q9LVM1 35333177
    7293 7n5b:A (3.8) BS01 ADP ? GO:0005524 ... Q9LVM1 35333177
    7294 7n5b:A (3.8) BS02 ADP ? GO:0005524 ... Q9LVM1 35333177
    7295 7n5b:B (3.8) BS01 ADP ? GO:0005524 ... Q9LVM1 35333177
    7296 7n5b:B (3.8) BS02 ADP ? GO:0005524 ... Q9LVM1 35333177
    7297 7n61:0X (3.5) BS01 ADP ? GO:0003774 ... A8I9T2 35578022
    7298 7n61:0Y (3.5) BS01 ADP ? GO:0003774 ... A8I9T2 35578022
    7299 7n61:0Z (3.5) BS01 ADP ? GO:0003774 ... A8I9T2 35578022
    7300 7n61:1A (3.5) BS01 ADP ? GO:0003774 ... A8I9T2 35578022
    7301 7n73:A (2.9) BS01 ADP 7.6.2.- GO:0000166 ... Q9NQ11 34715013
    7302 7n9d:A (2.1) BS01 ADP 2.7.4.26 GO:0005524 ... M9SEQ1 34905349
    7303 7n9d:B (2.1) BS01 ADP 2.7.4.26 GO:0005524 ... M9SEQ1 34905349
    7304 7nfy:E (3.9) BS02 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7305 7ng4:D (4.4) BS03 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7306 7ng4:E (4.4) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7307 7ng5:D (3.8) BS03 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7308 7nga:A (3.9) BS04 ADP 3.6.4.13 GO:0002376 ... Q8R5F7 34795277
    7309 7ngc:D (7.5) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7310 7ngf:C (5.6) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7311 7ngl:A (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7312 7ngl:B (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7313 7ngl:C (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7314 7ngl:D (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7315 7ngl:E (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7316 7ngl:F (3.8) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7317 7ngp:A (15.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7318 7ngp:B (15.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7319 7ngp:C (15.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7320 7ngp:D (15.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7321 7ngp:E (15.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7322 7ngp:F (15.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7323 7ngq:A (12.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7324 7ngq:B (12.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7325 7ngq:C (12.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7326 7ngq:D (12.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7327 7ngq:E (12.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7328 7ngq:F (12.0) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 35870450
    7329 7nic:A (4.3) BS03 ADP 3.6.4.13 GO:0002376 ... Q8R5F7 34795277
    7330 7nih:A (2.6) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7331 7nih:B (2.6) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7332 7nih:C (2.6) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7333 7nih:D (2.6) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7334 7nih:E (2.6) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7335 7nih:F (2.6) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7336 7nih:G (2.6) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7337 7nih:H (2.6) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7338 7nii:A (2.88) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7339 7nii:B (2.88) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7340 7nii:C (2.88) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7341 7nii:D (2.88) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7342 7nii:E (2.88) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7343 7nii:F (2.88) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7344 7nii:G (2.88) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7345 7nii:H (2.88) BS01 ADP ? GO:0004713 ... Q9X4B9 34272394
    7346 7niq:B (4.3) BS03 ADP 3.6.4.13 GO:0002376 ... Q8R5F7 34795277
    7347 7njk:D (2.52) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7348 7njk:E (2.52) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7349 7njl:C (2.71) BS02 ADP 7.1.2.2 GO:0005524 ... A0R202 34782468
    7350 7njl:D (2.71) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7351 7njl:E (2.71) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7352 7njm:D (2.84) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7353 7njm:E (2.84) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7354 7njn:C (2.64) BS02 ADP 7.1.2.2 GO:0005524 ... A0R202 34782468
    7355 7njn:D (2.64) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7356 7njn:E (2.64) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7357 7njo:C (2.92) BS02 ADP 7.1.2.2 GO:0005524 ... A0R202 34782468
    7358 7njo:D (2.92) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7359 7njo:E (2.92) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7360 7njp:C (2.84) BS02 ADP 7.1.2.2 GO:0005524 ... A0R202 34782468
    7361 7njp:D (2.84) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7362 7njp:E (2.84) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7363 7njq:C (2.67) BS02 ADP 7.1.2.2 GO:0005524 ... A0R202 34782468
    7364 7njq:D (2.67) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7365 7njq:E (2.67) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7366 7njr:C (2.56) BS02 ADP 7.1.2.2 GO:0005524 ... A0R202 34782468
    7367 7njr:D (2.56) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7368 7njr:E (2.56) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7369 7njs:C (2.46) BS02 ADP 7.1.2.2 GO:0005524 ... A0R202 34782468
    7370 7njs:D (2.46) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7371 7njs:E (2.46) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7372 7nk7:C (2.11) BS02 ADP 7.1.2.2 GO:0005524 ... A0R202 34782468
    7373 7nk7:D (2.11) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7374 7nk7:E (2.11) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7375 7nkh:C (2.78) BS02 ADP 7.1.2.2 GO:0005524 ... A0R202 34782468
    7376 7nkh:D (2.78) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7377 7nkh:E (2.78) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7378 7nkj:C (2.17) BS02 ADP 7.1.2.2 GO:0005524 ... A0R202 34782468
    7379 7nkj:D (2.17) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7380 7nkj:E (2.17) BS01 ADP 7.1.2.2 GO:0005524 ... A0R200 34782468
    7381 7nkx:W (2.9) BS03 ADP 3.6.4.- GO:0000123 ... P32657 33846633
    7382 7nmj:A (2.08) BS01 ADP ? GO:0005524 ... Q9RY20 N/A
    7383 7nmj:A (2.08) BS02 ADP ? GO:0005524 ... Q9RY20 N/A
    7384 7nmj:B (2.08) BS01 ADP ? GO:0005524 ... Q9RY20 N/A
    7385 7nmj:C (2.08) BS01 ADP ? GO:0005524 ... Q9RY20 N/A
    7386 7nmj:C (2.08) BS02 ADP ? GO:0005524 ... Q9RY20 N/A
    7387 7nmj:D (2.08) BS01 ADP ? GO:0005524 ... Q9RY20 N/A
    7388 7npe:A (3.2) BS01 ADP ? GO:0000166 ... Q9KKJ2 N/A
    7389 7npe:B (3.2) BS01 ADP ? GO:0000166 ... Q9KKJ2 N/A
    7390 7npe:C (3.2) BS01 ADP ? GO:0000166 ... Q9KKJ2 N/A
    7391 7npe:D (3.2) BS01 ADP ? GO:0000166 ... Q9KKJ2 N/A
    7392 7nvl:A (2.5) BS01 ADP ? GO:0000242 ... P17987 35449234
    7393 7nvl:B (2.5) BS01 ADP ? GO:0002199 ... P78371 35449234
    7394 7nvl:D (2.5) BS01 ADP ? GO:0002199 ... P50991 35449234
    7395 7nvl:E (2.5) BS01 ADP ? GO:0003730 ... P48643 35449234
    7396 7nvl:G (2.5) BS01 ADP ? GO:0002199 ... P49368 35449234
    7397 7nvl:H (2.5) BS01 ADP ? GO:0005515 ... Q99832 35449234
    7398 7nvl:Q (2.5) BS01 ADP ? GO:0002199 ... P50990 35449234
    7399 7nvl:Z (2.5) BS01 ADP ? GO:0003723 ... P40227 35449234
    7400 7nvl:a (2.5) BS01 ADP ? GO:0000242 ... P17987 35449234

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218