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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 594392 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    582401 8uej:AB (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582402 8uej:AC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582403 8uej:AC (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582404 8uej:AG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582405 8uej:AN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582406 8uej:AS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582407 8uej:AT (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582408 8uej:AU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582409 8uej:AZ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582410 8uej:BE (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582411 8uej:BE (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582412 8uej:BG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582413 8uej:BK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582414 8uej:BK (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582415 8uej:BL (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582416 8uej:BM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582417 8uej:BM (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582418 8uej:BQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582419 8uej:BW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582420 8uej:BX (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582421 8uej:BY (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582422 8uej:BY (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582423 8uej:CC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582424 8uej:CC (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582425 8uej:CE (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582426 8uej:CI (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582427 8uej:CK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582428 8uej:CP (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582429 8uej:CU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582430 8uej:CW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582431 8uej:DN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582432 8uej:DS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582433 8uej:DT (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582434 8uej:DY (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582435 8uej:EA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582436 8uej:EF (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582437 8uej:EK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582438 8uej:EL (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582439 8uej:EM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582440 8uej:EQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582441 8uej:EQ (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582442 8uej:ER (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582443 8uej:ES (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582444 8uej:EW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582445 8uej:EX (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582446 8uej:EY (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582447 8uej:FC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582448 8uej:FD (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582449 8uej:FJ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582450 8uej:FK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582451 8uej:FO (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582452 8uej:FP (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582453 8uej:FQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582454 8uej:FU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582455 8uej:FW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582456 8uej:GB (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582457 8uej:GG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582458 8uej:GN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582459 8uej:GO (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582460 8uej:GS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582461 8uej:GT (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582462 8uej:GU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582463 8uej:HC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582464 8uej:HD (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582465 8uej:HE (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582466 8uej:HI (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582467 8uej:HJ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582468 8uej:HK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582469 8uej:HO (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582470 8uej:HP (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582471 8uej:HQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582472 8uej:HU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582473 8uej:HW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582474 8uej:HW (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582475 8uej:IA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582476 8uej:IA (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582477 8uej:IB (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582478 8uej:IC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582479 8uej:IH (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582480 8uej:II (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582481 8uej:IM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582482 8uej:IN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582483 8uej:IT (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582484 8uej:IY (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582485 8uej:IZ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582486 8uej:JA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582487 8uej:JA (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582488 8uej:JF (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582489 8uej:JG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582490 8uej:JK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582491 8uej:JK (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582492 8uej:JL (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582493 8uej:JL (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582494 8uej:JM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582495 8uej:JQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582496 8uej:JR (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582497 8uej:JS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582498 8uej:JW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582499 8uej:KC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582500 8uej:KD (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582501 8uej:KE (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582502 8uej:KJ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582503 8uej:KK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582504 8uej:KO (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582505 8uej:KQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582506 8uej:KV (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582507 8uej:LA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582508 8uej:LB (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582509 8uej:LB (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582510 8uej:LG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582511 8uej:LH (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582512 8uej:LI (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582513 8uej:LM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582514 8uej:LN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582515 8uej:LO (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582516 8uej:LO (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582517 8uej:LS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582518 8uej:LU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582519 8uej:LY (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582520 8uej:LZ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582521 8uej:MA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582522 8uej:ME (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582523 8uej:MG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582524 8uej:MK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582525 8uej:ML (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582526 8uej:ML (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    582527 8uej:MM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582528 8uej:MR (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582529 8uej:MS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582530 8uej:NA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582531 8uej:NN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    582532 8uel:A (2.49) BS01 PEP 4.2.1.11 GO:0000015 ... O96656 38033172
    582533 8uel:A (2.49) BS02 MG 4.2.1.11 GO:0000015 ... O96656 38033172
    582534 8uel:A (2.49) BS03 MG 4.2.1.11 GO:0000015 ... O96656 38033172
    582535 8uel:B (2.49) BS01 PEP 4.2.1.11 GO:0000015 ... O96656 38033172
    582536 8uel:B (2.49) BS02 MG 4.2.1.11 GO:0000015 ... O96656 38033172
    582537 8ueo:1E (3.8) BS01 FES N/A GO:0005739 ... A0A4X1VRV3 38811722
    582538 8ueo:1F (3.8) BS01 FMN N/A GO:0005739 ... A0A4X1SZP7 38811722
    582539 8ueo:1F (3.8) BS02 SF4 N/A GO:0005739 ... A0A4X1SZP7 38811722
    582540 8ueo:1G (3.8) BS01 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    582541 8ueo:1G (3.8) BS02 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    582542 8ueo:1G (3.8) BS03 FES N/A GO:0005743 ... A0A287ARY3 38811722
    582543 8ueo:1I (3.8) BS01 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    582544 8ueo:1I (3.8) BS02 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    582545 8ueo:1O (3.8) BS01 GTP N/A GO:0005737 ... F1SIS9 38811722
    582546 8ueo:1P (3.8) BS01 NDP N/A GO:0005739 ... A0A4X1ULW2 38811722
    582547 8ueo:1R (3.8) BS01 ZN N/A GO:0005739 ... A0A4X1THU2 38811722
    582548 8ueo:1T (3.8) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    582549 8ueo:1U (3.8) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    582550 8ueo:1W (3.8) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    582551 8uep:1E (3.4) BS01 FES N/A GO:0005739 ... A0A4X1VRV3 38811722
    582552 8uep:1F (3.4) BS01 FMN N/A GO:0005739 ... A0A4X1SZP7 38811722
    582553 8uep:1F (3.4) BS02 SF4 N/A GO:0005739 ... A0A4X1SZP7 38811722
    582554 8uep:1G (3.4) BS01 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    582555 8uep:1G (3.4) BS02 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    582556 8uep:1G (3.4) BS03 FES N/A GO:0005743 ... A0A287ARY3 38811722
    582557 8uep:1H (3.4) BS01 U10 N/A GO:0003954 ... A0A0U1RS44 38811722
    582558 8uep:1I (3.4) BS01 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    582559 8uep:1I (3.4) BS02 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    582560 8uep:1O (3.4) BS01 GTP N/A GO:0005737 ... F1SIS9 38811722
    582561 8uep:1P (3.4) BS01 NDP N/A GO:0005739 ... A0A4X1ULW2 38811722
    582562 8uep:1R (3.4) BS01 ZN N/A GO:0005739 ... A0A4X1THU2 38811722
    582563 8uep:1U (3.4) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    582564 8uep:1W (3.4) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    582565 8ueq:1E (3.4) BS01 FES N/A GO:0005739 ... A0A4X1VRV3 38811722
    582566 8ueq:1F (3.4) BS01 FMN N/A GO:0005739 ... A0A4X1SZP7 38811722
    582567 8ueq:1F (3.4) BS02 SF4 N/A GO:0005739 ... A0A4X1SZP7 38811722
    582568 8ueq:1G (3.4) BS01 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    582569 8ueq:1G (3.4) BS02 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    582570 8ueq:1G (3.4) BS03 FES N/A GO:0005743 ... A0A287ARY3 38811722
    582571 8ueq:1H (3.4) BS01 U10 N/A GO:0003954 ... A0A0U1RS44 38811722
    582572 8ueq:1I (3.4) BS01 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    582573 8ueq:1I (3.4) BS02 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    582574 8ueq:1O (3.4) BS01 GTP N/A GO:0005737 ... F1SIS9 38811722
    582575 8ueq:1P (3.4) BS01 NDP N/A GO:0005739 ... A0A4X1ULW2 38811722
    582576 8ueq:1R (3.4) BS01 ZN N/A GO:0005739 ... A0A4X1THU2 38811722
    582577 8ueq:1T (3.4) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    582578 8ueq:1U (3.4) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    582579 8ueq:1W (3.4) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    582580 8uer:1E (3.5) BS01 FES N/A GO:0005739 ... A0A4X1VRV3 38811722
    582581 8uer:1F (3.5) BS01 FMN N/A GO:0005739 ... A0A4X1SZP7 38811722
    582582 8uer:1F (3.5) BS02 SF4 N/A GO:0005739 ... A0A4X1SZP7 38811722
    582583 8uer:1G (3.5) BS01 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    582584 8uer:1G (3.5) BS02 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    582585 8uer:1G (3.5) BS03 FES N/A GO:0005743 ... A0A287ARY3 38811722
    582586 8uer:1H (3.5) BS01 U10 N/A GO:0003954 ... A0A0U1RS44 38811722
    582587 8uer:1I (3.5) BS01 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    582588 8uer:1I (3.5) BS02 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    582589 8uer:1O (3.5) BS01 GTP N/A GO:0005737 ... F1SIS9 38811722
    582590 8uer:1P (3.5) BS01 NDP N/A GO:0005739 ... A0A4X1ULW2 38811722
    582591 8uer:1R (3.5) BS01 ZN N/A GO:0005739 ... A0A4X1THU2 38811722
    582592 8uer:1T (3.5) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    582593 8uer:1U (3.5) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    582594 8uer:1W (3.5) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    582595 8ues:1E (3.6) BS01 FES N/A GO:0005739 ... A0A4X1VRV3 38811722
    582596 8ues:1F (3.6) BS01 FMN N/A GO:0005739 ... A0A4X1SZP7 38811722
    582597 8ues:1F (3.6) BS02 SF4 N/A GO:0005739 ... A0A4X1SZP7 38811722
    582598 8ues:1G (3.6) BS01 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    582599 8ues:1G (3.6) BS02 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    582600 8ues:1G (3.6) BS03 FES N/A GO:0005743 ... A0A287ARY3 38811722
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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