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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    795201 8shl:e (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    795202 8shl:e (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795203 8shl:g (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    795204 8shl:g (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795205 8shl:h (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795206 8shl:h (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795207 8shl:q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    795208 8shl:q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795209 8shl:z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    795210 8shl:z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    795211 8shn:A (2.8) BS01 ADP ? GO:0000242 ... P17987 37852256
    795212 8shn:A (2.8) BS02 AF3 ? GO:0000242 ... P17987 37852256
    795213 8shn:B (2.8) BS01 ADP ? GO:0002199 ... P78371 37852256
    795214 8shn:B (2.8) BS02 AF3 ? GO:0002199 ... P78371 37852256
    795215 8shn:D (2.8) BS01 ADP ? GO:0002199 ... P50991 37852256
    795216 8shn:D (2.8) BS02 AF3 ? GO:0002199 ... P50991 37852256
    795217 8shn:E (2.8) BS01 ADP ? GO:0003730 ... P48643 37852256
    795218 8shn:E (2.8) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795219 8shn:G (2.8) BS01 ADP ? GO:0002199 ... P49368 37852256
    795220 8shn:G (2.8) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795221 8shn:H (2.8) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795222 8shn:H (2.8) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795223 8shn:Q (2.8) BS01 ADP ? GO:0002199 ... P50990 37852256
    795224 8shn:Q (2.8) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795225 8shn:Z (2.8) BS01 ADP ? GO:0003723 ... P40227 37852256
    795226 8shn:Z (2.8) BS02 MG ? GO:0003723 ... P40227 37852256
    795227 8shn:Z (2.8) BS03 AF3 ? GO:0003723 ... P40227 37852256
    795228 8shn:a (2.8) BS01 ADP ? GO:0000242 ... P17987 37852256
    795229 8shn:a (2.8) BS02 AF3 ? GO:0000242 ... P17987 37852256
    795230 8shn:b (2.8) BS01 ADP ? GO:0002199 ... P78371 37852256
    795231 8shn:b (2.8) BS02 AF3 ? GO:0002199 ... P78371 37852256
    795232 8shn:d (2.8) BS01 ADP ? GO:0002199 ... P50991 37852256
    795233 8shn:d (2.8) BS02 AF3 ? GO:0002199 ... P50991 37852256
    795234 8shn:e (2.8) BS01 ADP ? GO:0003730 ... P48643 37852256
    795235 8shn:e (2.8) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795236 8shn:g (2.8) BS01 ADP ? GO:0002199 ... P49368 37852256
    795237 8shn:g (2.8) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795238 8shn:h (2.8) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795239 8shn:h (2.8) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795240 8shn:q (2.8) BS01 ADP ? GO:0002199 ... P50990 37852256
    795241 8shn:q (2.8) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795242 8shn:z (2.8) BS01 ADP ? GO:0003723 ... P40227 37852256
    795243 8shn:z (2.8) BS02 AF3 ? GO:0003723 ... P40227 37852256
    795244 8sho:A (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    795245 8sho:A (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    795246 8sho:B (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    795247 8sho:B (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    795248 8sho:D (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    795249 8sho:D (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    795250 8sho:E (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    795251 8sho:E (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795252 8sho:G (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    795253 8sho:G (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795254 8sho:H (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795255 8sho:H (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795256 8sho:Q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    795257 8sho:Q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795258 8sho:Z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    795259 8sho:Z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    795260 8sho:a (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    795261 8sho:a (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    795262 8sho:b (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    795263 8sho:b (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    795264 8sho:d (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    795265 8sho:d (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    795266 8sho:e (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    795267 8sho:e (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795268 8sho:g (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    795269 8sho:g (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795270 8sho:h (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795271 8sho:h (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795272 8sho:q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    795273 8sho:q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795274 8sho:z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    795275 8sho:z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    795276 8shp:A (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    795277 8shp:A (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    795278 8shp:B (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    795279 8shp:B (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    795280 8shp:D (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    795281 8shp:D (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    795282 8shp:E (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    795283 8shp:E (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795284 8shp:G (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    795285 8shp:G (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795286 8shp:H (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795287 8shp:H (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795288 8shp:Q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    795289 8shp:Q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795290 8shp:Z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    795291 8shp:Z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    795292 8shp:a (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    795293 8shp:a (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    795294 8shp:b (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    795295 8shp:b (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    795296 8shp:d (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    795297 8shp:d (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    795298 8shp:e (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    795299 8shp:e (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795300 8shp:g (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    795301 8shp:g (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795302 8shp:h (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795303 8shp:h (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795304 8shp:q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    795305 8shp:q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795306 8shp:z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    795307 8shp:z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    795308 8shq:A (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    795309 8shq:A (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    795310 8shq:B (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    795311 8shq:B (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    795312 8shq:D (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    795313 8shq:D (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    795314 8shq:E (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    795315 8shq:E (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795316 8shq:G (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    795317 8shq:G (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795318 8shq:H (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795319 8shq:H (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795320 8shq:Q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    795321 8shq:Q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795322 8shq:Z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    795323 8shq:Z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    795324 8shq:a (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    795325 8shq:a (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    795326 8shq:b (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    795327 8shq:b (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    795328 8shq:d (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    795329 8shq:d (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    795330 8shq:e (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    795331 8shq:e (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795332 8shq:g (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    795333 8shq:g (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795334 8shq:h (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795335 8shq:h (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795336 8shq:q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    795337 8shq:q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795338 8shq:z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    795339 8shq:z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    795340 8shr:A (1.92) BS01 HIY 2.1.1.319 GO:0016274 ... O60678 N/A
    795341 8sht:A (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    795342 8sht:A (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    795343 8sht:B (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    795344 8sht:B (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    795345 8sht:D (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    795346 8sht:D (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    795347 8sht:E (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    795348 8sht:E (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795349 8sht:G (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    795350 8sht:G (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795351 8sht:H (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795352 8sht:H (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795353 8sht:Q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    795354 8sht:Q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795355 8sht:Z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    795356 8sht:Z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    795357 8sht:a (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    795358 8sht:a (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    795359 8sht:b (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    795360 8sht:b (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    795361 8sht:d (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    795362 8sht:d (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    795363 8sht:e (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    795364 8sht:e (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    795365 8sht:g (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    795366 8sht:g (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    795367 8sht:h (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    795368 8sht:h (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    795369 8sht:q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    795370 8sht:q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    795371 8sht:z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    795372 8sht:z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    795373 8si2:A (2.19) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795374 8si2:A (2.19) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795375 8si2:A (2.19) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795376 8si2:A (2.19) BS04 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795377 8si2:B (2.19) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795378 8si2:B (2.19) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795379 8si2:B (2.19) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795380 8si2:B (2.19) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795381 8si2:C (2.19) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795382 8si2:C (2.19) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795383 8si2:C (2.19) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795384 8si2:C (2.19) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795385 8si2:D (2.19) BS01 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795386 8si2:D (2.19) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795387 8si2:D (2.19) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795388 8si2:D (2.19) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795389 8si3:A (2.61) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795390 8si3:A (2.61) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795391 8si3:A (2.61) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795392 8si3:B (2.61) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795393 8si3:B (2.61) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795394 8si3:B (2.61) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795395 8si3:C (2.61) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795396 8si3:C (2.61) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795397 8si3:C (2.61) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795398 8si3:D (2.61) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795399 8si3:D (2.61) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    795400 8si3:D (2.61) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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