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BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    792801 8rvm:YYY (1.6) BS03 HEC N/A GO:0042279 ... N/A N/A
    792802 8rvm:YYY (1.6) BS04 HEC N/A GO:0042279 ... N/A N/A
    792803 8rvm:YYY (1.6) BS05 HEC N/A GO:0042279 ... N/A N/A
    792804 8rvm:YYY (1.6) BS06 HEC N/A GO:0042279 ... N/A N/A
    792805 8rvm:YYY (1.6) BS07 HEC N/A GO:0042279 ... N/A N/A
    792806 8rvm:YYY (1.6) BS08 HEC N/A GO:0042279 ... N/A N/A
    792807 8rvm:YYY (1.6) BS09 CA N/A GO:0042279 ... N/A N/A
    792808 8rvs:A (1.632) BS01 MG N/A GO:0008168 ... D5FKJ3 38887142
    792809 8rvs:A (1.632) BS02 SAM N/A GO:0008168 ... D5FKJ3 38887142
    792810 8rvs:B (1.632) BS01 MG N/A GO:0008168 ... D5FKJ3 38887142
    792811 8rvs:B (1.632) BS02 SAM N/A GO:0008168 ... D5FKJ3 38887142
    792812 8rw3:A (1.9) BS01 GDQ 2.4.1.161 GO:0003824 ... B3PEE6 38623783
    792813 8rw3:B (1.9) BS01 GDQ 2.4.1.161 GO:0003824 ... B3PEE6 38623783
    792814 8rw3:B (1.9) BS02 OXL 2.4.1.161 GO:0003824 ... B3PEE6 38623783
    792815 8rw3:C (1.9) BS01 GDQ 2.4.1.161 GO:0003824 ... B3PEE6 38623783
    792816 8rwj:A (3.5) BS01 6R9 N/A GO:0003987 ... N1P7N2 38906101
    792817 8rwj:B (3.5) BS01 6R9 N/A GO:0003987 ... N1P7N2 38906101
    792818 8rwj:C (3.5) BS01 6R9 N/A GO:0003987 ... N1P7N2 38906101
    792819 8rwj:D (3.5) BS01 6R9 N/A GO:0003987 ... N1P7N2 38906101
    792820 8rwj:E (3.5) BS01 6R9 N/A GO:0003987 ... N1P7N2 38906101
    792821 8rwj:F (3.5) BS01 6R9 N/A GO:0003987 ... N1P7N2 38906101
    792822 8rwj:G (3.5) BS01 6R9 N/A GO:0003987 ... N1P7N2 38906101
    792823 8rwj:H (3.5) BS01 6R9 N/A GO:0003987 ... N1P7N2 38906101
    792824 8rwj:I (3.5) BS01 6R9 N/A GO:0003987 ... N1P7N2 38906101
    792825 8rwk:A (3.8) BS01 NAP N/A GO:0004029 ... P46367 38906101
    792826 8rwk:B (3.8) BS01 NAP N/A GO:0004029 ... P46367 38906101
    792827 8rwk:C (3.8) BS01 NAP N/A GO:0004029 ... P46367 38906101
    792828 8rwk:D (3.8) BS01 NAP N/A GO:0004029 ... P46367 38906101
    792829 8rwl:A (2.3) BS01 NDP N/A GO:0004459 ... Q8TWG5 N/A
    792830 8rwl:B (2.3) BS01 NDP N/A GO:0004459 ... Q8TWG5 N/A
    792831 8rwm:A (1.644) BS01 MG N/A GO:0008168 ... D5FKJ3 38887142
    792832 8rwm:A (1.644) BS02 MG N/A GO:0008168 ... D5FKJ3 38887142
    792833 8rwm:B (1.644) BS01 MG N/A GO:0008168 ... D5FKJ3 38887142
    792834 8rww:A (1.95) BS01 ZN N/A GO:0008168 ... R9UTR3 38887142
    792835 8rww:A (1.95) BS02 COI N/A GO:0008168 ... R9UTR3 38887142
    792836 8rwy:A (3.02) BS01 HEM N/A GO:0004601 ... A0A7U8UU09 38864770
    792837 8rwy:B (3.02) BS01 HEM N/A GO:0004601 ... A0A7U8UU09 38864770
    792838 8rwy:C (3.02) BS01 HEM N/A GO:0004601 ... A0A7U8UU09 38864770
    792839 8rwy:D (3.02) BS01 HEM N/A GO:0004601 ... A0A7U8UU09 38864770
    792840 8rwy:E (3.02) BS01 HEM N/A GO:0004601 ... A0A7U8UU09 38864770
    792841 8rwy:F (3.02) BS01 HEM N/A GO:0004601 ... A0A7U8UU09 38864770
    792842 8rwz:R (4.0) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 N/A
    792843 8rwz:R (4.0) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 N/A
    792844 8rwz:R (4.0) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 N/A
    792845 8rx0:R (3.7) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 N/A
    792846 8rx0:R (3.7) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 N/A
    792847 8rx0:R (3.7) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 N/A
    792848 8rx3:A (1.85) BS01 ZN 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 38476002
    792849 8rx3:A (1.85) BS02 A1H3T 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 38476002
    792850 8rx7:A (1.85) BS01 ZN 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 38476002
    792851 8rx7:A (1.85) BS02 A1H3S 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 38476002
    792852 8rx9:A (2.9) BS01 ZN 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 38476002
    792853 8rx9:A (2.9) BS02 A1H3U 3.3.2.6
    3.4.11.4
    GO:0003723 ... P09960 38476002
    792854 8rxb:A (2.6) BS01 peptide 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792855 8rxb:A (2.6) BS02 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792856 8rxb:A (2.6) BS03 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792857 8rxb:D (2.6) BS01 peptide 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792858 8rxb:D (2.6) BS02 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792859 8rxb:D (2.6) BS03 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792860 8rxb:E (2.6) BS01 peptide 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792861 8rxb:E (2.6) BS02 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792862 8rxb:E (2.6) BS03 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792863 8rxb:I (2.6) BS01 peptide 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792864 8rxb:I (2.6) BS02 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792865 8rxb:I (2.6) BS03 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792866 8rxb:L (2.6) BS01 peptide 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792867 8rxb:L (2.6) BS02 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792868 8rxb:L (2.6) BS03 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792869 8rxb:P (2.6) BS01 peptide 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792870 8rxb:P (2.6) BS02 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792871 8rxb:P (2.6) BS03 ZN 3.6.4.12
    3.6.4.13
    GO:0000184 ... Q92900 38709891
    792872 8rxf:A (2.27) BS01 ZN N/A GO:0008168 ... R9UTR3 38887142
    792873 8rxf:A (2.27) BS02 COI N/A GO:0008168 ... R9UTR3 38887142
    792874 8rxg:A (1.813) BS01 ZN N/A GO:0008168 ... R9UTR3 38887142
    792875 8rxg:A (1.813) BS02 COI N/A GO:0008168 ... R9UTR3 38887142
    792876 8rxg:A (1.813) BS03 SAM N/A GO:0008168 ... R9UTR3 38887142
    792877 8rxh:LA (2.93) BS01 rna ? GO:0002181 ... Q4FWX5 38722744
    792878 8rxh:LA (2.93) BS02 rna ? GO:0002181 ... Q4FWX5 38722744
    792879 8rxh:LA (2.93) BS03 rna ? GO:0002181 ... Q4FWX5 38722744
    792880 8rxh:LA (2.93) BS04 rna ? GO:0002181 ... Q4FWX5 38722744
    792881 8rxh:LB (2.93) BS01 rna ? GO:0003723 ... Q4Q2Q6 38722744
    792882 8rxh:LB (2.93) BS02 rna ? GO:0003723 ... Q4Q2Q6 38722744
    792883 8rxh:LB (2.93) BS03 rna ? GO:0003723 ... Q4Q2Q6 38722744
    792884 8rxh:LB (2.93) BS04 rna ? GO:0003723 ... Q4Q2Q6 38722744
    792885 8rxh:LC (2.93) BS01 rna ? GO:0003723 ... E9ADW5 38722744
    792886 8rxh:LC (2.93) BS02 rna ? GO:0003723 ... E9ADW5 38722744
    792887 8rxh:LC (2.93) BS03 rna ? GO:0003723 ... E9ADW5 38722744
    792888 8rxh:LC (2.93) BS04 MG ? GO:0003723 ... E9ADW5 38722744
    792889 8rxh:LD (2.93) BS01 rna ? GO:0003723 ... P48157 38722744
    792890 8rxh:LD (2.93) BS02 rna ? GO:0003723 ... P48157 38722744
    792891 8rxh:LE (2.93) BS01 rna ? GO:0002181 ... Q4QC91 38722744
    792892 8rxh:LE (2.93) BS02 rna ? GO:0002181 ... Q4QC91 38722744
    792893 8rxh:LE (2.93) BS03 rna ? GO:0002181 ... Q4QC91 38722744
    792894 8rxh:LE (2.93) BS04 rna ? GO:0002181 ... Q4QC91 38722744
    792895 8rxh:LF (2.93) BS01 rna ? GO:0000027 ... Q4Q4D3 38722744
    792896 8rxh:LF (2.93) BS02 rna ? GO:0000027 ... Q4Q4D3 38722744
    792897 8rxh:LG (2.93) BS01 rna ? GO:0000470 ... Q4QIP1 38722744
    792898 8rxh:LG (2.93) BS02 rna ? GO:0000470 ... Q4QIP1 38722744
    792899 8rxh:LG (2.93) BS03 rna ? GO:0000470 ... Q4QIP1 38722744
    792900 8rxh:LH (2.93) BS01 rna ? GO:0003729 ... Q4QFG2 38722744
    792901 8rxh:LH (2.93) BS02 rna ? GO:0003729 ... Q4QFG2 38722744
    792902 8rxh:LH (2.93) BS03 rna ? GO:0003729 ... Q4QFG2 38722744
    792903 8rxh:LH (2.93) BS04 rna ? GO:0003729 ... Q4QFG2 38722744
    792904 8rxh:LI (2.93) BS01 rna ? GO:0003723 ... E9AEA8 38722744
    792905 8rxh:LI (2.93) BS02 rna ? GO:0003723 ... E9AEA8 38722744
    792906 8rxh:LI (2.93) BS03 rna ? GO:0003723 ... E9AEA8 38722744
    792907 8rxh:LJ (2.93) BS01 rna ? GO:0003735 ... E9AFK3 38722744
    792908 8rxh:LJ (2.93) BS02 rna ? GO:0003735 ... E9AFK3 38722744
    792909 8rxh:LK (2.93) BS01 rna ? GO:0003723 ... Q4QBJ1 38722744
    792910 8rxh:LK (2.93) BS02 rna ? GO:0003723 ... Q4QBJ1 38722744
    792911 8rxh:LK (2.93) BS03 rna ? GO:0003723 ... Q4QBJ1 38722744
    792912 8rxh:LL (2.93) BS01 rna ? GO:0003735 ... E9AFK0 38722744
    792913 8rxh:LL (2.93) BS02 rna ? GO:0003735 ... E9AFK0 38722744
    792914 8rxh:LM (2.93) BS01 rna ? GO:0002181 ... Q4Q6S3 38722744
    792915 8rxh:LM (2.93) BS02 rna ? GO:0002181 ... Q4Q6S3 38722744
    792916 8rxh:LM (2.93) BS03 rna ? GO:0002181 ... Q4Q6S3 38722744
    792917 8rxh:LN (2.93) BS01 rna ? GO:0000027 ... O97213 38722744
    792918 8rxh:LN (2.93) BS02 rna ? GO:0000027 ... O97213 38722744
    792919 8rxh:LN (2.93) BS03 rna ? GO:0000027 ... O97213 38722744
    792920 8rxh:LO (2.93) BS01 rna ? GO:0000027 ... E9AF09 38722744
    792921 8rxh:LO (2.93) BS02 rna ? GO:0000027 ... E9AF09 38722744
    792922 8rxh:LO (2.93) BS03 rna ? GO:0000027 ... E9AF09 38722744
    792923 8rxh:LP (2.93) BS01 rna ? GO:0003723 ... Q4QG98 38722744
    792924 8rxh:LP (2.93) BS02 rna ? GO:0003723 ... Q4QG98 38722744
    792925 8rxh:LQ (2.93) BS01 rna ? GO:0003723 ... Q4QJ37 38722744
    792926 8rxh:LQ (2.93) BS02 rna ? GO:0003723 ... Q4QJ37 38722744
    792927 8rxh:LQ (2.93) BS03 rna ? GO:0003723 ... Q4QJ37 38722744
    792928 8rxh:LQ (2.93) BS04 rna ? GO:0003723 ... Q4QJ37 38722744
    792929 8rxh:LQ (2.93) BS05 rna ? GO:0003723 ... Q4QJ37 38722744
    792930 8rxh:LR (2.93) BS01 rna ? GO:0003735 ... Q4Q5J4 38722744
    792931 8rxh:LR (2.93) BS02 rna ? GO:0003735 ... Q4Q5J4 38722744
    792932 8rxh:LR (2.93) BS03 rna ? GO:0003735 ... Q4Q5J4 38722744
    792933 8rxh:LS (2.93) BS01 rna ? GO:0003735 ... Q4QEX4 38722744
    792934 8rxh:LS (2.93) BS02 rna ? GO:0003735 ... Q4QEX4 38722744
    792935 8rxh:LS (2.93) BS03 rna ? GO:0003735 ... Q4QEX4 38722744
    792936 8rxh:LT (2.93) BS01 rna ? GO:0002181 ... Q4QAX6 38722744
    792937 8rxh:LT (2.93) BS02 rna ? GO:0002181 ... Q4QAX6 38722744
    792938 8rxh:LT (2.93) BS03 rna ? GO:0002181 ... Q4QAX6 38722744
    792939 8rxh:LT (2.93) BS04 rna ? GO:0002181 ... Q4QAX6 38722744
    792940 8rxh:LT (2.93) BS05 rna ? GO:0002181 ... Q4QAX6 38722744
    792941 8rxh:LU (2.93) BS01 rna ? GO:0002181 ... Q4Q0X2 38722744
    792942 8rxh:LU (2.93) BS02 rna ? GO:0002181 ... Q4Q0X2 38722744
    792943 8rxh:LU (2.93) BS03 rna ? GO:0002181 ... Q4Q0X2 38722744
    792944 8rxh:LV (2.93) BS01 rna ? GO:0000027 ... Q4QJ20 38722744
    792945 8rxh:LV (2.93) BS02 rna ? GO:0000027 ... Q4QJ20 38722744
    792946 8rxh:LV (2.93) BS03 rna ? GO:0000027 ... Q4QJ20 38722744
    792947 8rxh:LW (2.93) BS01 rna ? GO:0002181 ... Q4QAC5 38722744
    792948 8rxh:LW (2.93) BS02 rna ? GO:0002181 ... Q4QAC5 38722744
    792949 8rxh:LW (2.93) BS03 MG ? GO:0002181 ... Q4QAC5 38722744
    792950 8rxh:LX (2.93) BS01 rna ? GO:0002181 ... Q4Q1W6 38722744
    792951 8rxh:LX (2.93) BS02 rna ? GO:0002181 ... Q4Q1W6 38722744
    792952 8rxh:LX (2.93) BS03 rna ? GO:0002181 ... Q4Q1W6 38722744
    792953 8rxh:LY (2.93) BS01 rna ? GO:0003735 ... Q4Q504 38722744
    792954 8rxh:LY (2.93) BS02 rna ? GO:0003735 ... Q4Q504 38722744
    792955 8rxh:LZ (2.93) BS01 rna ? GO:0003735 ... Q4QGW7 38722744
    792956 8rxh:La (2.93) BS01 rna ? GO:0000463 ... Q4Q8V7 38722744
    792957 8rxh:La (2.93) BS02 rna ? GO:0000463 ... Q4Q8V7 38722744
    792958 8rxh:Lb (2.93) BS01 rna ? GO:0002181 ... Q4Q178 38722744
    792959 8rxh:Lb (2.93) BS02 rna ? GO:0002181 ... Q4Q178 38722744
    792960 8rxh:Lc (2.93) BS01 rna ? GO:0000463 ... Q4Q9H4 38722744
    792961 8rxh:Lc (2.93) BS02 rna ? GO:0000463 ... Q4Q9H4 38722744
    792962 8rxh:Ld (2.93) BS01 rna ? GO:0003723 ... E9AEK1 38722744
    792963 8rxh:Ld (2.93) BS02 rna ? GO:0003723 ... E9AEK1 38722744
    792964 8rxh:Le (2.93) BS01 rna ? GO:0002181 ... E9AFF2 38722744
    792965 8rxh:Le (2.93) BS02 rna ? GO:0002181 ... E9AFF2 38722744
    792966 8rxh:Le (2.93) BS03 rna ? GO:0002181 ... E9AFF2 38722744
    792967 8rxh:Le (2.93) BS04 rna ? GO:0002181 ... E9AFF2 38722744
    792968 8rxh:Lf (2.93) BS01 rna ? GO:0003735 ... Q4QC11 38722744
    792969 8rxh:Lf (2.93) BS02 MG ? GO:0003735 ... Q4QC11 38722744
    792970 8rxh:Lg (2.93) BS01 rna ? GO:0002181 ... Q4QHL3 38722744
    792971 8rxh:Lg (2.93) BS02 rna ? GO:0002181 ... Q4QHL3 38722744
    792972 8rxh:Lg (2.93) BS03 rna ? GO:0002181 ... Q4QHL3 38722744
    792973 8rxh:Lh (2.93) BS01 rna ? GO:0003735 ... Q4QDP9 38722744
    792974 8rxh:Lh (2.93) BS02 rna ? GO:0003735 ... Q4QDP9 38722744
    792975 8rxh:Lh (2.93) BS03 rna ? GO:0003735 ... Q4QDP9 38722744
    792976 8rxh:Li (2.93) BS01 rna ? GO:0002181 ... Q4QCE1 38722744
    792977 8rxh:Li (2.93) BS02 rna ? GO:0002181 ... Q4QCE1 38722744
    792978 8rxh:Lj (2.93) BS01 rna ? GO:0003723 ... E9AEH2 38722744
    792979 8rxh:Lj (2.93) BS02 rna ? GO:0003723 ... E9AEH2 38722744
    792980 8rxh:Lj (2.93) BS03 rna ? GO:0003723 ... E9AEH2 38722744
    792981 8rxh:Lk (2.93) BS01 rna ? GO:0003735 ... Q4Q8X0 38722744
    792982 8rxh:Lk (2.93) BS02 rna ? GO:0003735 ... Q4Q8X0 38722744
    792983 8rxh:Lk (2.93) BS03 rna ? GO:0003735 ... Q4Q8X0 38722744
    792984 8rxh:Ll (2.93) BS01 rna ? GO:0003735 ... Q4QEQ0 38722744
    792985 8rxh:Ll (2.93) BS02 rna ? GO:0003735 ... Q4QEQ0 38722744
    792986 8rxh:Ll (2.93) BS03 rna ? GO:0003735 ... Q4QEQ0 38722744
    792987 8rxh:Lm (2.93) BS01 rna ? GO:0003735 ... P69201 38722744
    792988 8rxh:Lm (2.93) BS02 rna ? GO:0003735 ... P69201 38722744
    792989 8rxh:Lm (2.93) BS03 rna ? GO:0003735 ... P69201 38722744
    792990 8rxh:Ln (2.93) BS01 rna N/A GO:0003735 ... N/A 38722744
    792991 8rxh:Ln (2.93) BS02 rna N/A GO:0003735 ... N/A 38722744
    792992 8rxh:Lo (2.93) BS01 rna ? GO:0003735 ... Q4QC01 38722744
    792993 8rxh:Lo (2.93) BS02 rna ? GO:0003735 ... Q4QC01 38722744
    792994 8rxh:Lo (2.93) BS03 rna ? GO:0003735 ... Q4QC01 38722744
    792995 8rxh:Lp (2.93) BS01 rna ? GO:0003735 ... Q4Q3L3 38722744
    792996 8rxh:Lp (2.93) BS02 rna ? GO:0003735 ... Q4Q3L3 38722744
    792997 8rxh:Lp (2.93) BS03 rna ? GO:0003735 ... Q4Q3L3 38722744
    792998 8rxh:Lp (2.93) BS04 ZN ? GO:0003735 ... Q4Q3L3 38722744
    792999 8rxh:SA (2.93) BS01 rna ? GO:0003735 ... Q4FX73 38722744
    793000 8rxh:SB (2.93) BS01 rna ? GO:0000028 ... Q4Q0Q0 38722744

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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