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BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    803601 8po9:C (2.2) BS02 CU ? N/A Q24995 37729416
    803602 8po9:C (2.2) BS03 MG ? N/A Q24995 37729416
    803603 8po9:C (2.2) BS04 GLY ? N/A Q24995 37729416
    803604 8po9:D (2.2) BS01 MAN ? N/A Q24995 37729416
    803605 8po9:D (2.2) BS02 CU ? N/A Q24995 37729416
    803606 8po9:D (2.2) BS03 GLY ? N/A Q24995 37729416
    803607 8po9:E (2.2) BS01 CU ? N/A Q24995 37729416
    803608 8po9:E (2.2) BS02 MG ? N/A Q24995 37729416
    803609 8po9:E (2.2) BS03 GLY ? N/A Q24995 37729416
    803610 8po9:F (2.2) BS01 CU ? N/A Q24995 37729416
    803611 8po9:F (2.2) BS02 MG ? N/A Q24995 37729416
    803612 8po9:F (2.2) BS03 GLY ? N/A Q24995 37729416
    803613 8poa:A (1.6) BS01 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0006508 ... Q65900 N/A
    803614 8poa:B (1.6) BS01 ZN 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0006508 ... Q65900 N/A
    803615 8poh:A (3.3) BS01 rna 3.1.-.- GO:0003723 ... M9TI86 38316757
    803616 8poh:A (3.3) BS02 rna 3.1.-.- GO:0003723 ... M9TI86 38316757
    803617 8poh:E (3.3) BS01 rna 3.1.-.- GO:0003723 ... M9TI86 38316757
    803618 8poh:E (3.3) BS02 rna 3.1.-.- GO:0003723 ... M9TI86 38316757
    803619 8poh:F (3.3) BS01 rna 2.7.7.48 GO:0000166 ... M9TLW3 38316757
    803620 8poi:A (-1.00) BS01 ZTI ? GO:0003723 ... O75940 37587144
    803621 8poj:A (2.45) BS01 ZUL ? N/A Q15562 37770003
    803622 8pok:A (3.4) BS01 HSM ? GO:0001696 ... P25021 38418462
    803623 8pol:A (3.09) BS01 CA 3.4.21.62 GO:0004252 ... Q8I0V0 38386597
    803624 8pol:A (3.09) BS02 CA 3.4.21.62 GO:0004252 ... Q8I0V0 38386597
    803625 8pol:A (3.09) BS03 CA 3.4.21.62 GO:0004252 ... Q8I0V0 38386597
    803626 8pol:A (3.09) BS04 CA 3.4.21.62 GO:0004252 ... Q8I0V0 38386597
    803627 8pol:B (3.09) BS01 CA 3.4.21.62 GO:0004252 ... Q8I0V0 38386597
    803628 8pol:B (3.09) BS02 CA 3.4.21.62 GO:0004252 ... Q8I0V0 38386597
    803629 8pol:B (3.09) BS03 CA 3.4.21.62 GO:0004252 ... Q8I0V0 38386597
    803630 8pol:B (3.09) BS04 CA 3.4.21.62 GO:0004252 ... Q8I0V0 38386597
    803631 8pom:A (1.95) BS01 ZUP ? N/A Q15562 37770003
    803632 8pom:B (1.95) BS01 ZUP ? N/A Q15562 37770003
    803633 8pon:A (2.2) BS01 ZUT ? N/A Q15562 37770003
    803634 8pop:A (3.0) BS01 dna ? N/A Q9MBW4 39116131
    803635 8pop:A (3.0) BS02 dna ? N/A Q9MBW4 39116131
    803636 8pop:B (3.0) BS01 dna ? N/A Q9MBW4 39116131
    803637 8pop:C (3.0) BS01 dna ? N/A Q9MBW4 39116131
    803638 8por:A (1.85) BS01 EYT 6.1.1.4 N/A Q5GS31 38985862
    803639 8pos:A (2.137) BS01 7RZ 6.1.1.4 N/A Q5GS31 38985862
    803640 8pos:B (2.137) BS01 7RZ 6.1.1.4 N/A Q5GS31 38985862
    803641 8pot:A (2.149) BS01 rna 6.1.1.4 GO:0004812 ... P07813 38985862
    803642 8pot:A (2.149) BS02 7RZ 6.1.1.4 GO:0004812 ... P07813 38985862
    803643 8pou:L (1.65) BS01 NFV 1.12.99.6 GO:0005515 ... P31891 37860641
    803644 8pou:L (1.65) BS02 MG 1.12.99.6 GO:0005515 ... P31891 37860641
    803645 8pou:L (1.65) BS03 SF4 1.12.99.6 GO:0005515 ... P31891 37860641
    803646 8pou:S (1.65) BS01 SF4 1.12.99.6 GO:0005515 ... P31892 37860641
    803647 8pou:S (1.65) BS02 F3S 1.12.99.6 GO:0005515 ... P31892 37860641
    803648 8pou:S (1.65) BS03 SF4 1.12.99.6 GO:0005515 ... P31892 37860641
    803649 8pov:L (1.92) BS01 NFU 1.12.99.6 GO:0005515 ... P31891 37860641
    803650 8pov:L (1.92) BS02 MG 1.12.99.6 GO:0005515 ... P31891 37860641
    803651 8pov:L (1.92) BS03 SF4 1.12.99.6 GO:0005515 ... P31891 37860641
    803652 8pov:S (1.92) BS01 SF4 1.12.99.6 GO:0005515 ... P31892 37860641
    803653 8pov:S (1.92) BS02 F3S 1.12.99.6 GO:0005515 ... P31892 37860641
    803654 8pov:S (1.92) BS03 SF4 1.12.99.6 GO:0005515 ... P31892 37860641
    803655 8pow:L (1.61) BS01 NFV 1.12.99.6 GO:0005515 ... P31891 37860641
    803656 8pow:L (1.61) BS02 MG 1.12.99.6 GO:0005515 ... P31891 37860641
    803657 8pow:S (1.61) BS01 SF4 1.12.99.6 GO:0005515 ... P31892 37860641
    803658 8pow:S (1.61) BS02 F3S 1.12.99.6 GO:0005515 ... P31892 37860641
    803659 8pow:S (1.61) BS03 ER2 1.12.99.6 GO:0005515 ... P31892 37860641
    803660 8pp0:A (1.9) BS01 peptide ? GO:0003677 ... P19793 38237049
    803661 8pp0:A (1.9) BS02 7QJ ? GO:0003677 ... P19793 38237049
    803662 8pp2:A (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803663 8pp2:B (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803664 8pp2:C (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803665 8pp2:D (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803666 8pp2:E (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803667 8pp2:F (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803668 8pp2:G (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803669 8pp2:H (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803670 8pp2:I (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803671 8pp2:J (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803672 8pp2:K (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803673 8pp2:L (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803674 8pp3:A (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803675 8pp3:B (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803676 8pp3:C (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803677 8pp3:D (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803678 8pp3:E (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803679 8pp3:F (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803680 8pp3:G (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803681 8pp3:H (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803682 8pp3:I (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803683 8pp3:J (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803684 8pp3:K (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803685 8pp3:L (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803686 8pp4:A (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803687 8pp4:B (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803688 8pp4:C (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803689 8pp4:C (1.999) BS02 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803690 8pp4:D (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803691 8pp4:E (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803692 8pp4:F (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803693 8pp4:G (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803694 8pp4:H (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803695 8pp4:I (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803696 8pp4:J (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803697 8pp4:K (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803698 8pp4:L (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803699 8pp5:A (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803700 8pp5:B (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803701 8pp5:C (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803702 8pp5:D (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803703 8pp5:E (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803704 8pp5:F (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    803705 8pp6:A (3.18) BS01 dna ? GO:0000785 ... P02299 38528151
    803706 8pp6:A (3.18) BS02 dna ? GO:0000785 ... P02299 38528151
    803707 8pp6:B (3.18) BS01 dna ? GO:0000228 ... P84040 38528151
    803708 8pp6:B (3.18) BS02 dna ? GO:0000228 ... P84040 38528151
    803709 8pp6:C (3.18) BS01 dna ? GO:0000786 ... P84051 38528151
    803710 8pp6:C (3.18) BS02 dna ? GO:0000786 ... P84051 38528151
    803711 8pp6:D (3.18) BS01 dna ? GO:0000786 ... P02283 38528151
    803712 8pp6:D (3.18) BS02 dna ? GO:0000786 ... P02283 38528151
    803713 8pp6:E (3.18) BS01 dna ? GO:0000785 ... P02299 38528151
    803714 8pp6:E (3.18) BS02 dna ? GO:0000785 ... P02299 38528151
    803715 8pp6:F (3.18) BS01 dna ? GO:0000228 ... P84040 38528151
    803716 8pp6:F (3.18) BS02 dna ? GO:0000228 ... P84040 38528151
    803717 8pp6:G (3.18) BS01 dna ? GO:0000786 ... P84051 38528151
    803718 8pp6:G (3.18) BS02 dna ? GO:0000786 ... P84051 38528151
    803719 8pp6:H (3.18) BS01 dna ? GO:0000786 ... P02283 38528151
    803720 8pp6:H (3.18) BS02 dna ? GO:0000786 ... P02283 38528151
    803721 8pp6:K (3.18) BS01 ZN ? GO:0000122 ... Q8N488 38528151
    803722 8pp7:A (2.91) BS01 dna ? GO:0000785 ... P02299 38528151
    803723 8pp7:A (2.91) BS02 dna ? GO:0000785 ... P02299 38528151
    803724 8pp7:B (2.91) BS01 dna ? GO:0000228 ... P84040 38528151
    803725 8pp7:B (2.91) BS02 dna ? GO:0000228 ... P84040 38528151
    803726 8pp7:C (2.91) BS01 dna ? GO:0000786 ... P84051 38528151
    803727 8pp7:C (2.91) BS02 dna ? GO:0000786 ... P84051 38528151
    803728 8pp7:D (2.91) BS01 dna ? GO:0000786 ... P02283 38528151
    803729 8pp7:D (2.91) BS02 dna ? GO:0000786 ... P02283 38528151
    803730 8pp7:E (2.91) BS01 dna ? GO:0000785 ... P02299 38528151
    803731 8pp7:E (2.91) BS02 dna ? GO:0000785 ... P02299 38528151
    803732 8pp7:F (2.91) BS01 dna ? GO:0000228 ... P84040 38528151
    803733 8pp7:G (2.91) BS01 dna ? GO:0000786 ... P84051 38528151
    803734 8pp7:G (2.91) BS02 dna ? GO:0000786 ... P84051 38528151
    803735 8pp7:H (2.91) BS01 dna ? GO:0000786 ... P02283 38528151
    803736 8pp7:H (2.91) BS02 dna ? GO:0000786 ... P02283 38528151
    803737 8pp7:K (2.91) BS01 ZN ? GO:0000122 ... P35226 38528151
    803738 8pp7:K (2.91) BS02 ZN ? GO:0000122 ... P35226 38528151
    803739 8pp7:L (2.91) BS01 ZN 2.3.2.27 GO:0000122 ... Q99496 38528151
    803740 8pp7:L (2.91) BS02 ZN 2.3.2.27 GO:0000122 ... Q99496 38528151
    803741 8pp7:M (2.91) BS01 ZN ? GO:0000122 ... P35226 38528151
    803742 8pp7:M (2.91) BS02 ZN ? GO:0000122 ... P35226 38528151
    803743 8pp7:N (2.91) BS01 ZN 2.3.2.27 GO:0000122 ... Q99496 38528151
    803744 8pp7:N (2.91) BS02 ZN 2.3.2.27 GO:0000122 ... Q99496 38528151
    803745 8pp8:A (1.59) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    803746 8pp8:A (1.59) BS02 3IA 2.7.1.127 GO:0016301 ... P23677 38374076
    803747 8pp8:B (1.59) BS01 3IA 2.7.1.127 GO:0016301 ... P23677 38374076
    803748 8pp8:B (1.59) BS02 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    803749 8pp9:A (1.73) BS01 4IM 2.7.1.127 GO:0016301 ... P23677 38374076
    803750 8pp9:A (1.73) BS02 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    803751 8pp9:B (1.73) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    803752 8pp9:B (1.73) BS02 4IM 2.7.1.127 GO:0016301 ... P23677 38374076
    803753 8ppa:A (1.73) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    803754 8ppa:A (1.73) BS02 06G 2.7.1.127 GO:0016301 ... P23677 38374076
    803755 8ppa:B (1.73) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    803756 8ppa:B (1.73) BS02 06G 2.7.1.127 GO:0016301 ... P23677 38374076
    803757 8ppb:A (1.8) BS01 3I2 2.7.1.127 GO:0016301 ... P23677 38374076
    803758 8ppb:A (1.8) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    803759 8ppb:B (1.8) BS01 3I2 2.7.1.127 GO:0016301 ... P23677 38374076
    803760 8ppb:B (1.8) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    803761 8ppc:A (1.92) BS01 2KM 2.7.1.127 GO:0016301 ... P23677 38374076
    803762 8ppc:A (1.92) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    803763 8ppc:B (1.92) BS01 2KM 2.7.1.127 GO:0016301 ... P23677 38374076
    803764 8ppc:B (1.92) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    803765 8ppd:A (1.77) BS01 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    803766 8ppd:A (1.77) BS02 75I 2.7.1.127 GO:0016301 ... P23677 38374076
    803767 8ppd:B (1.77) BS01 75I 2.7.1.127 GO:0016301 ... P23677 38374076
    803768 8ppd:B (1.77) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    803769 8ppe:A (1.59) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    803770 8ppe:A (1.59) BS02 7I8 2.7.1.127 GO:0016301 ... P23677 38374076
    803771 8ppe:B (1.59) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    803772 8ppe:B (1.59) BS02 7I8 2.7.1.127 GO:0016301 ... P23677 38374076
    803773 8ppf:A (1.85) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    803774 8ppf:A (1.85) BS02 6II 2.7.1.127 GO:0016301 ... P23677 38374076
    803775 8ppf:B (1.85) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    803776 8ppf:B (1.85) BS02 6II 2.7.1.127 GO:0016301 ... P23677 38374076
    803777 8ppg:A (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    803778 8ppg:A (1.75) BS02 46I 2.7.1.127 GO:0016301 ... P23677 38374076
    803779 8ppg:B (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    803780 8ppg:B (1.75) BS02 46I 2.7.1.127 GO:0016301 ... P23677 38374076
    803781 8pph:A (1.7) BS01 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    803782 8pph:A (1.7) BS02 5AI 2.7.1.127 GO:0016301 ... P23677 38374076
    803783 8pph:B (1.7) BS01 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    803784 8ppi:A (1.65) BS01 69I 2.7.1.127 GO:0016301 ... P23677 38374076
    803785 8ppi:A (1.65) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    803786 8ppi:B (1.65) BS01 69I 2.7.1.127 GO:0016301 ... P23677 38374076
    803787 8ppi:B (1.65) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    803788 8ppj:A (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    803789 8ppj:A (1.75) BS02 661 2.7.1.127 GO:0016301 ... P23677 38374076
    803790 8ppj:B (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    803791 8ppj:B (1.75) BS02 661 2.7.1.127 GO:0016301 ... P23677 38374076
    803792 8ppk:A (2.98) BS01 rna ? GO:0000028 ... P08865 37802027
    803793 8ppk:B (2.98) BS01 rna ? GO:0002181 ... P61247 37802027
    803794 8ppk:C (2.98) BS01 rna ? GO:0002181 ... P15880 37802027
    803795 8ppk:D (2.98) BS01 rna 4.2.99.18 GO:0000977 ... P23396 37802027
    803796 8ppk:E (2.98) BS01 rna ? GO:0002181 ... P62701 37802027
    803797 8ppk:F (2.98) BS01 rna ? GO:0000028 ... P46782 37802027
    803798 8ppk:G (2.98) BS01 rna ? GO:0000082 ... P62753 37802027
    803799 8ppk:H (2.98) BS01 rna ? GO:0001843 ... P62081 37802027
    803800 8ppk:I (2.98) BS01 rna ? GO:0000462 ... P62241 37802027

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218